RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 VEGFAP15692 232 aaPredicted RBP7.3□□□□□ -1.24
SMAD3-209ENST00000558894 APLP1P51693 650 aa7.3□□□□□ -1.24
SMAD3-209ENST00000558894 CCDC184Q52MB2 194 aa7.3□□□□□ -1.24
SMAD3-209ENST00000558894 NCBP3Q53F19 620 aaKnown RBP7.3□□□□□ -1.24
SMAD3-209ENST00000558894 SLC10A5Q5PT55 438 aa7.3□□□□□ -1.24
SMAD3-209ENST00000558894 NPM2Q86SE8 214 aaKnown RBP7.3□□□□□ -1.24
SMAD3-209ENST00000558894 DDNO94850 711 aaPredicted RBP7.29□□□□□ -1.24
SMAD3-209ENST00000558894 POTEIP0CG38 1075 aa7.29□□□□□ -1.24
SMAD3-209ENST00000558894 POTEJP0CG39 1038 aa7.29□□□□□ -1.24
SMAD3-209ENST00000558894 GPTP24298 496 aa7.29□□□□□ -1.24
SMAD3-209ENST00000558894 FKBP4Q02790 459 aaKnown RBP eCLIP7.29□□□□□ -1.24
SMAD3-209ENST00000558894 SOGA3Q5TF21 947 aa7.29□□□□□ -1.24
SMAD3-209ENST00000558894 KIF6Q6ZMV9 814 aa7.29□□□□□ -1.24
SMAD3-209ENST00000558894 ZNF541Q9H0D2 1346 aa7.28□□□□□ -1.24
SMAD3-209ENST00000558894 FZD9O00144 591 aa7.28□□□□□ -1.24
SMAD3-209ENST00000558894 EIF2S2P20042 333 aaKnown RBP7.28□□□□□ -1.24
SMAD3-209ENST00000558894 ALDH1B1P30837 517 aa7.28□□□□□ -1.24
SMAD3-209ENST00000558894 LMOD3Q0VAK6 560 aa7.28□□□□□ -1.24
SMAD3-209ENST00000558894 NEUROD2Q15784 382 aa7.28□□□□□ -1.24
SMAD3-209ENST00000558894 CCDC93Q567U6 631 aa7.28□□□□□ -1.24
SMAD3-209ENST00000558894 COPS6Q7L5N1 327 aa7.28□□□□□ -1.24
SMAD3-209ENST00000558894 NLRP10Q86W26 655 aa7.28□□□□□ -1.24
SMAD3-209ENST00000558894 SYNE4Q8N205 404 aa7.28□□□□□ -1.24
SMAD3-209ENST00000558894 JMYQ8N9B5 988 aa7.28□□□□□ -1.24
SMAD3-209ENST00000558894 SMC1BQ8NDV3 1235 aa7.28□□□□□ -1.24
SMAD3-209ENST00000558894 L3MBTL3Q96JM7 780 aaPredicted RBP7.28□□□□□ -1.24
SMAD3-209ENST00000558894 CRAMP1Q96RY5 1269 aa7.28□□□□□ -1.24
SMAD3-209ENST00000558894 PSMD1Q99460 953 aa7.28□□□□□ -1.24
SMAD3-209ENST00000558894 NYXQ9GZU5 481 aa7.28□□□□□ -1.24
SMAD3-209ENST00000558894 DDX21Q9NR30 783 aaKnown RBP eCLIP7.28□□□□□ -1.24
SMAD3-209ENST00000558894 ZNF277Q9NRM2 450 aaPredicted RBP7.28□□□□□ -1.24
SMAD3-209ENST00000558894 ZNF646O15015 1829 aaPredicted RBP7.28□□□□□ -1.24
SMAD3-209ENST00000558894 PSME4Q14997 1843 aa7.27□□□□□ -1.25
SMAD3-209ENST00000558894 MYH3P11055 1940 aa7.27□□□□□ -1.25
SMAD3-209ENST00000558894 IARSP41252 1262 aaKnown RBP7.27□□□□□ -1.25
SMAD3-209ENST00000558894 PARP10Q53GL7 1025 aa7.27□□□□□ -1.25
SMAD3-209ENST00000558894 RTKN2Q8IZC4 609 aa7.27□□□□□ -1.25
SMAD3-209ENST00000558894 XAGE3Q8WTP9 111 aa7.27□□□□□ -1.25
SMAD3-209ENST00000558894 NECTIN2Q92692 538 aa7.27□□□□□ -1.25
SMAD3-209ENST00000558894 CFAP44Q96MT7 982 aa7.27□□□□□ -1.25
SMAD3-209ENST00000558894 MBIPQ9NS73 344 aa7.27□□□□□ -1.25
SMAD3-209ENST00000558894 CHPF2Q9P2E5 772 aa7.27□□□□□ -1.25
SMAD3-209ENST00000558894 CACNA1FO60840 1977 aa7.26□□□□□ -1.25
SMAD3-209ENST00000558894 TRPM7Q96QT4 1865 aa7.26□□□□□ -1.25
SMAD3-209ENST00000558894 APAF1O14727 1248 aa7.26□□□□□ -1.25
SMAD3-209ENST00000558894 NPHP1O15259 732 aa7.26□□□□□ -1.25
SMAD3-209ENST00000558894 HOXB7P09629 217 aa7.26□□□□□ -1.25
SMAD3-209ENST00000558894 TCIRG1Q13488 830 aa7.26□□□□□ -1.25
SMAD3-209ENST00000558894 WDR43Q15061 677 aaKnown RBP eCLIP7.26□□□□□ -1.25
SMAD3-209ENST00000558894 DPY19L2Q6NUT2 758 aa7.26□□□□□ -1.25
SMAD3-209ENST00000558894 C16orf71Q8IYS4 520 aaPredicted RBP7.26□□□□□ -1.25
SMAD3-209ENST00000558894 KLRG1Q96E93 195 aa7.26□□□□□ -1.25
SMAD3-209ENST00000558894 ISCA1Q9BUE6 129 aa7.26□□□□□ -1.25
SMAD3-209ENST00000558894 SPEF2Q9C093 1822 aa7.26□□□□□ -1.25
SMAD3-209ENST00000558894 SCN9AQ15858 1988 aa7.26□□□□□ -1.25
SMAD3-209ENST00000558894 ABCC4O15439 1325 aa7.26□□□□□ -1.25
SMAD3-209ENST00000558894 RNF123Q5XPI4 1314 aa7.26□□□□□ -1.25
SMAD3-209ENST00000558894 PASKQ96RG2 1323 aa7.26□□□□□ -1.25
SMAD3-209ENST00000558894 ITGBL1O95965 494 aaPredicted RBP7.25□□□□□ -1.25
SMAD3-209ENST00000558894 GTF2E1P29083 439 aaPredicted RBP7.25□□□□□ -1.25
SMAD3-209ENST00000558894 AIMP1Q12904 312 aaKnown RBP7.25□□□□□ -1.25
SMAD3-209ENST00000558894 DUSP27Q5VZP5 1158 aa7.25□□□□□ -1.25
SMAD3-209ENST00000558894 CC2D2BQ6DHV5 1058 aa7.25□□□□□ -1.25
SMAD3-209ENST00000558894 PPP1R42Q7Z4L9 355 aa7.25□□□□□ -1.25
SMAD3-209ENST00000558894 PLBD2Q8NHP8 589 aa7.25□□□□□ -1.25
SMAD3-209ENST00000558894 UTP14AQ9BVJ6 771 aaKnown RBP7.25□□□□□ -1.25
SMAD3-209ENST00000558894 TAF1DQ9H5J8 278 aaPredicted RBP7.25□□□□□ -1.25
SMAD3-209ENST00000558894 ATP6V0A2Q9Y487 856 aa7.25□□□□□ -1.25
SMAD3-209ENST00000558894 A0A1B0GUL6 1792 aa7.25□□□□□ -1.25
SMAD3-209ENST00000558894 THSD7BQ9C0I4 1608 aa7.24□□□□□ -1.25
SMAD3-209ENST00000558894 PPEF1O14829 653 aaPredicted RBP7.24□□□□□ -1.25
SMAD3-209ENST00000558894 HCLS1P14317 486 aaPredicted RBP7.24□□□□□ -1.25
SMAD3-209ENST00000558894 HSP90AB3PQ58FF7 597 aa7.24□□□□□ -1.25
SMAD3-209ENST00000558894 HDGFL1Q5TGJ6 251 aa7.24□□□□□ -1.25
SMAD3-209ENST00000558894 CHADLQ6NUI6 762 aa7.24□□□□□ -1.25
SMAD3-209ENST00000558894 ANKRD13DQ6ZTN6 518 aa7.24□□□□□ -1.25
SMAD3-209ENST00000558894 GPC2Q8N158 579 aa7.24□□□□□ -1.25
SMAD3-209ENST00000558894 C8orf58Q8NAV2 365 aa7.24□□□□□ -1.25
SMAD3-209ENST00000558894 RPGRQ92834 1020 aaKnown RBP7.24□□□□□ -1.25
SMAD3-209ENST00000558894 ZNF428Q96B54 188 aa7.24□□□□□ -1.25
SMAD3-209ENST00000558894 RBM17Q96I25 401 aaKnown RBP7.24□□□□□ -1.25
SMAD3-209ENST00000558894 NLRP3Q96P20 1036 aa7.24□□□□□ -1.25
SMAD3-209ENST00000558894 RTFDC1Q9BY42 306 aaPredicted RBP7.24□□□□□ -1.25
SMAD3-209ENST00000558894 PHAXQ9H814 394 aaKnown RBP7.24□□□□□ -1.25
SMAD3-209ENST00000558894 IFT57Q9NWB7 429 aa7.24□□□□□ -1.25
SMAD3-209ENST00000558894 DBF4Q9UBU7 674 aaPredicted RBP7.24□□□□□ -1.25
SMAD3-209ENST00000558894 LAS1LQ9Y4W2 734 aaKnown RBP7.24□□□□□ -1.25
SMAD3-209ENST00000558894 POLR2AP24928 1970 aaKnown RBP7.24□□□□□ -1.25
SMAD3-209ENST00000558894 TCERG1O14776 1098 aaKnown RBP7.23□□□□□ -1.25
SMAD3-209ENST00000558894 SCNN1DP51172 638 aa7.23□□□□□ -1.25
SMAD3-209ENST00000558894 TRIM28Q13263 835 aaKnown RBP7.23□□□□□ -1.25
SMAD3-209ENST00000558894 SF3B3Q15393 1217 aaKnown RBP7.23□□□□□ -1.25
SMAD3-209ENST00000558894 GRIPAP1Q4V328 841 aa7.23□□□□□ -1.25
SMAD3-209ENST00000558894 SP8Q8IXZ3 490 aa7.23□□□□□ -1.25
SMAD3-209ENST00000558894 TSPYL6Q8N831 410 aa7.23□□□□□ -1.25
SMAD3-209ENST00000558894 HYPKQ9NX55 129 aa7.23□□□□□ -1.25
SMAD3-209ENST00000558894 TRMT112Q9UI30 125 aaKnown RBP7.23□□□□□ -1.25
SMAD3-209ENST00000558894 SH3TC1Q8TE82 1336 aa7.23□□□□□ -1.25
SMAD3-209ENST00000558894 IQCA1LA6NCM1 817 aa7.22□□□□□ -1.25
SMAD3-209ENST00000558894 ATP5J2-PTCD1G3V325 749 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms