RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 MYL6BP14649 208 aa9.65□□□□□ -0.86
LRRC28-211ENST00000558890 DSG3P32926 999 aa9.65□□□□□ -0.86
LRRC28-211ENST00000558890 COPS6Q7L5N1 327 aa9.65□□□□□ -0.86
LRRC28-211ENST00000558890 FTSJ3Q8IY81 847 aaKnown RBP9.65□□□□□ -0.86
LRRC28-211ENST00000558890 ZNF34Q8IZ26 560 aa9.65□□□□□ -0.86
LRRC28-211ENST00000558890 MRPL50Q8N5N7 158 aaKnown RBP9.65□□□□□ -0.86
LRRC28-211ENST00000558890 SSH1Q8WYL5 1049 aa9.65□□□□□ -0.86
LRRC28-211ENST00000558890 NECTIN2Q92692 538 aa9.65□□□□□ -0.86
LRRC28-211ENST00000558890 API5Q9BZZ5 524 aaKnown RBP9.65□□□□□ -0.86
LRRC28-211ENST00000558890 SMC4Q9NTJ3 1288 aa9.65□□□□□ -0.86
LRRC28-211ENST00000558890 SERPINB2P05120 415 aa9.64□□□□□ -0.87
LRRC28-211ENST00000558890 FLIIQ13045 1269 aa9.64□□□□□ -0.87
LRRC28-211ENST00000558890 HSP90AB3PQ58FF7 597 aa9.64□□□□□ -0.87
LRRC28-211ENST00000558890 GIGYF2Q6Y7W6 1299 aaKnown RBP9.64□□□□□ -0.87
LRRC28-211ENST00000558890 PLBD2Q8NHP8 589 aa9.64□□□□□ -0.87
LRRC28-211ENST00000558890 XAGE3Q8WTP9 111 aa9.64□□□□□ -0.87
LRRC28-211ENST00000558890 C10orf71Q711Q0 1435 aa9.64□□□□□ -0.87
LRRC28-211ENST00000558890 LAMB2P55268 1798 aa9.63□□□□□ -0.87
LRRC28-211ENST00000558890 KLRG2A4D1S0 409 aaPredicted RBP9.63□□□□□ -0.87
LRRC28-211ENST00000558890 MVPQ14764 893 aaKnown RBP9.63□□□□□ -0.87
LRRC28-211ENST00000558890 G2E3Q7L622 706 aa9.63□□□□□ -0.87
LRRC28-211ENST00000558890 DZIP1LQ8IYY4 767 aaKnown RBP9.63□□□□□ -0.87
LRRC28-211ENST00000558890 BCL2L13Q9BXK5 485 aa9.63□□□□□ -0.87
LRRC28-211ENST00000558890 PHAXQ9H814 394 aaKnown RBP9.63□□□□□ -0.87
LRRC28-211ENST00000558890 PPP1R1BQ9UD71 204 aaPredicted RBP9.63□□□□□ -0.87
LRRC28-211ENST00000558890 ZNF652Q9Y2D9 606 aa9.63□□□□□ -0.87
LRRC28-211ENST00000558890 ZNF330Q9Y3S2 320 aaPredicted RBP9.63□□□□□ -0.87
LRRC28-211ENST00000558890 PARP3Q9Y6F1 533 aa9.63□□□□□ -0.87
LRRC28-211ENST00000558890 NRXN2Q9P2S2 1712 aa9.62□□□□□ -0.87
LRRC28-211ENST00000558890 ABCC4O15439 1325 aa9.62□□□□□ -0.87
LRRC28-211ENST00000558890 UBN2Q6ZU65 1347 aa9.62□□□□□ -0.87
LRRC28-211ENST00000558890 RGS3P49796 1198 aa9.62□□□□□ -0.87
LRRC28-211ENST00000558890 TGFB2P61812 414 aa9.62□□□□□ -0.87
LRRC28-211ENST00000558890 TRIM28Q13263 835 aaKnown RBP9.62□□□□□ -0.87
LRRC28-211ENST00000558890 PRR5LQ6MZQ0 368 aa9.62□□□□□ -0.87
LRRC28-211ENST00000558890 KSR2Q6VAB6 950 aa9.62□□□□□ -0.87
LRRC28-211ENST00000558890 ATF7IPQ6VMQ6 1270 aa9.62□□□□□ -0.87
LRRC28-211ENST00000558890 KIF6Q6ZMV9 814 aa9.62□□□□□ -0.87
LRRC28-211ENST00000558890 CHMP4BQ9H444 224 aaKnown RBP9.62□□□□□ -0.87
LRRC28-211ENST00000558890 RWDD1Q9H446 243 aaPredicted RBP9.62□□□□□ -0.87
LRRC28-211ENST00000558890 RIC1Q4ADV7 1423 aa9.62□□□□□ -0.87
LRRC28-211ENST00000558890 AFDNP55196 1824 aaKnown RBP9.61□□□□□ -0.87
LRRC28-211ENST00000558890 TCIRG1Q13488 830 aa9.61□□□□□ -0.87
LRRC28-211ENST00000558890 BICDL1Q6ZP65 573 aa9.61□□□□□ -0.87
LRRC28-211ENST00000558890 ANKRD13DQ6ZTN6 518 aa9.61□□□□□ -0.87
LRRC28-211ENST00000558890 SETDB2Q96T68 719 aa9.61□□□□□ -0.87
LRRC28-211ENST00000558890 ISCA1Q9BUE6 129 aa9.61□□□□□ -0.87
LRRC28-211ENST00000558890 ZBTB3Q9H5J0 574 aa9.61□□□□□ -0.87
LRRC28-211ENST00000558890 DDX19BQ9UMR2 479 aa9.61□□□□□ -0.87
LRRC28-211ENST00000558890 ADCY9O60503 1353 aa9.61□□□□□ -0.87
LRRC28-211ENST00000558890 CARMIL3Q8ND23 1372 aa9.61□□□□□ -0.87
LRRC28-211ENST00000558890 KIF13BQ9NQT8 1826 aa9.61□□□□□ -0.87
LRRC28-211ENST00000558890 KIAA1551Q9HCM1 1747 aa9.6□□□□□ -0.87
LRRC28-211ENST00000558890 A0A0G2JLW4 131 aa9.6□□□□□ -0.87
LRRC28-211ENST00000558890 ALDH1L1O75891 902 aa9.6□□□□□ -0.87
LRRC28-211ENST00000558890 DPEP1P16444 411 aa9.6□□□□□ -0.87
LRRC28-211ENST00000558890 YBX3P16989 372 aaKnown RBP eCLIP9.6□□□□□ -0.871e-6■■■□□ 17.7
LRRC28-211ENST00000558890 CCT4P50991 539 aaKnown RBP9.6□□□□□ -0.87
LRRC28-211ENST00000558890 AIMP1Q12904 312 aaKnown RBP9.6□□□□□ -0.87
LRRC28-211ENST00000558890 FKBP5Q13451 457 aaPredicted RBP9.6□□□□□ -0.87
LRRC28-211ENST00000558890 PARP10Q53GL7 1025 aa9.6□□□□□ -0.87
LRRC28-211ENST00000558890 SLC10A5Q5PT55 438 aa9.6□□□□□ -0.87
LRRC28-211ENST00000558890 SUSD4Q5VX71 490 aa9.6□□□□□ -0.87
LRRC28-211ENST00000558890 INTS3Q68E01 1043 aaKnown RBP9.6□□□□□ -0.87
LRRC28-211ENST00000558890 SKAP1Q86WV1 359 aa9.6□□□□□ -0.87
LRRC28-211ENST00000558890 BRIP1Q9BX63 1249 aa9.6□□□□□ -0.87
LRRC28-211ENST00000558890 DAXXQ9UER7 740 aaPredicted RBP9.6□□□□□ -0.87
LRRC28-211ENST00000558890 HDAC5Q9UQL6 1122 aa9.6□□□□□ -0.87
LRRC28-211ENST00000558890 NIP7Q9Y221 180 aaKnown RBP eCLIP9.6□□□□□ -0.87
LRRC28-211ENST00000558890 NTSR2O95665 410 aa9.59□□□□□ -0.87
LRRC28-211ENST00000558890 TRIM27P14373 513 aa9.59□□□□□ -0.87
LRRC28-211ENST00000558890 NEXNQ0ZGT2 675 aa9.59□□□□□ -0.87
LRRC28-211ENST00000558890 RTL5Q5HYW3 569 aaPredicted RBP9.59□□□□□ -0.87
LRRC28-211ENST00000558890 NLRP10Q86W26 655 aa9.59□□□□□ -0.87
LRRC28-211ENST00000558890 SYNE4Q8N205 404 aa9.59□□□□□ -0.87
LRRC28-211ENST00000558890 CCDC24Q8N4L8 307 aa9.59□□□□□ -0.87
LRRC28-211ENST00000558890 CCDC191Q8NCU4 936 aa9.59□□□□□ -0.87
LRRC28-211ENST00000558890 LINS1Q8NG48 757 aa9.59□□□□□ -0.87
LRRC28-211ENST00000558890 DNAAF4Q8WXU2 420 aa9.59□□□□□ -0.87
LRRC28-211ENST00000558890 METTL22Q9BUU2 404 aaPredicted RBP9.59□□□□□ -0.87
LRRC28-211ENST00000558890 IGHDP01880 384 aa9.58□□□□□ -0.88
LRRC28-211ENST00000558890 IGKV5-2P06315 115 aa9.58□□□□□ -0.88
LRRC28-211ENST00000558890 RLBP1P12271 317 aa9.58□□□□□ -0.88
LRRC28-211ENST00000558890 HSP90B1P14625 803 aaKnown RBP9.58□□□□□ -0.88
LRRC28-211ENST00000558890 CHRNA5P30532 468 aa9.58□□□□□ -0.88
LRRC28-211ENST00000558890 C8orf34Q49A92 452 aa9.58□□□□□ -0.88
LRRC28-211ENST00000558890 TPTE2Q6XPS3 522 aa9.58□□□□□ -0.88
LRRC28-211ENST00000558890 C3orf67Q6ZVT6 689 aa9.58□□□□□ -0.88
LRRC28-211ENST00000558890 ITPRIPQ8IWB1 547 aa9.58□□□□□ -0.88
LRRC28-211ENST00000558890 NOB1Q9ULX3 412 aaKnown RBP9.58□□□□□ -0.88
LRRC28-211ENST00000558890 MYH3P11055 1940 aa9.58□□□□□ -0.88
LRRC28-211ENST00000558890 UTYO14607 1347 aa9.57□□□□□ -0.88
LRRC28-211ENST00000558890 PI4KAP2A4QPH2 592 aa9.57□□□□□ -0.88
LRRC28-211ENST00000558890 GPTP24298 496 aa9.57□□□□□ -0.88
LRRC28-211ENST00000558890 CRY2Q49AN0 593 aa9.57□□□□□ -0.88
LRRC28-211ENST00000558890 ERFEQ4G0M1 354 aa9.57□□□□□ -0.88
LRRC28-211ENST00000558890 RIC3Q7Z5B4 369 aa9.57□□□□□ -0.88
LRRC28-211ENST00000558890 PI4KAP1Q8N8J0 262 aa9.57□□□□□ -0.88
LRRC28-211ENST00000558890 C7orf43Q8WVR3 580 aa9.57□□□□□ -0.88
LRRC28-211ENST00000558890 TNNQ9UQP3 1299 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms