RNA–Protein interactions for RNA: ENST00000558886.1

NEO1-205, Transcript of neogenin 1, humanhuman

TSL 2

Gene NEO1, Length 543 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-205ENST00000558886 CARMIL3Q8ND23 1372 aa13.2□□□□□ -0.3
NEO1-205ENST00000558886 C4AP0C0L4 1744 aa13.19□□□□□ -0.3
NEO1-205ENST00000558886 NEURL1BA8MQ27 555 aa13.19□□□□□ -0.3
NEO1-205ENST00000558886 ST5P78524 1137 aa13.19□□□□□ -0.3
NEO1-205ENST00000558886 CWF19L2Q2TBE0 894 aaKnown RBP13.19□□□□□ -0.3
NEO1-205ENST00000558886 SUSD4Q5VX71 490 aa13.19□□□□□ -0.3
NEO1-205ENST00000558886 CNBD1Q8NA66 436 aa13.19□□□□□ -0.3
NEO1-205ENST00000558886 ATP10DQ9P241 1426 aa13.19□□□□□ -0.3
NEO1-205ENST00000558886 NUP98P52948 1817 aa13.18□□□□□ -0.3
NEO1-205ENST00000558886 POLRMTO00411 1230 aaKnown RBP13.18□□□□□ -0.3
NEO1-205ENST00000558886 IGKV5-2P06315 115 aa13.18□□□□□ -0.3
NEO1-205ENST00000558886 HSP90B1P14625 803 aaKnown RBP13.18□□□□□ -0.3
NEO1-205ENST00000558886 YY1P25490 414 aa13.18□□□□□ -0.3
NEO1-205ENST00000558886 RRP1P56182 461 aaKnown RBP13.18□□□□□ -0.3
NEO1-205ENST00000558886 DDR1Q08345 913 aa13.18□□□□□ -0.3
NEO1-205ENST00000558886 COL24A1Q17RW2 1714 aa13.17□□□□□ -0.3
NEO1-205ENST00000558886 GCKRQ14397 625 aa13.17□□□□□ -0.3
NEO1-205ENST00000558886 PDE3AQ14432 1141 aa13.17□□□□□ -0.3
NEO1-205ENST00000558886 RTL5Q5HYW3 569 aaPredicted RBP13.17□□□□□ -0.3
NEO1-205ENST00000558886 INTS3Q68E01 1043 aaKnown RBP13.17□□□□□ -0.3
NEO1-205ENST00000558886 ITPRIPQ8IWB1 547 aa13.17□□□□□ -0.3
NEO1-205ENST00000558886 PANK1Q8TE04 598 aa13.17□□□□□ -0.3
NEO1-205ENST00000558886 HDAC5Q9UQL6 1122 aa13.17□□□□□ -0.3
NEO1-205ENST00000558886 TNNQ9UQP3 1299 aa13.17□□□□□ -0.3
NEO1-205ENST00000558886 UBN2Q6ZU65 1347 aa13.16□□□□□ -0.3
NEO1-205ENST00000558886 SH3TC1Q8TE82 1336 aa13.16□□□□□ -0.3
NEO1-205ENST00000558886 SCN7AQ01118 1682 aa13.16□□□□□ -0.3
NEO1-205ENST00000558886 PCCAP05165 728 aaPredicted RBP13.16□□□□□ -0.3
NEO1-205ENST00000558886 NUTM1Q86Y26 1132 aa13.16□□□□□ -0.3
NEO1-205ENST00000558886 TMEM57Q8N5G2 664 aa13.16□□□□□ -0.3
NEO1-205ENST00000558886 ZBTB38Q8NAP3 1195 aaPredicted RBP13.16□□□□□ -0.3
NEO1-205ENST00000558886 JARID2Q92833 1246 aaPredicted RBP13.16□□□□□ -0.3
NEO1-205ENST00000558886 FAM89AQ96GI7 184 aa13.16□□□□□ -0.3
NEO1-205ENST00000558886 CHMP4BQ9H444 224 aaKnown RBP13.16□□□□□ -0.3
NEO1-205ENST00000558886 BCORQ6W2J9 1755 aa13.16□□□□□ -0.3
NEO1-205ENST00000558886 ABCC4O15439 1325 aa13.15□□□□□ -0.3
NEO1-205ENST00000558886 RNF123Q5XPI4 1314 aa13.15□□□□□ -0.3
NEO1-205ENST00000558886 ARFGEF2Q9Y6D5 1785 aa13.15□□□□□ -0.3
NEO1-205ENST00000558886 GRM8O00222 908 aa13.15□□□□□ -0.3
NEO1-205ENST00000558886 NTSR2O95665 410 aa13.15□□□□□ -0.3
NEO1-205ENST00000558886 GPR162Q16538 588 aa13.15□□□□□ -0.3
NEO1-205ENST00000558886 ERFEQ4G0M1 354 aa13.15□□□□□ -0.3
NEO1-205ENST00000558886 PRR5LQ6MZQ0 368 aa13.15□□□□□ -0.3
NEO1-205ENST00000558886 UBE3BQ7Z3V4 1068 aa13.15□□□□□ -0.3
NEO1-205ENST00000558886 PELP1Q8IZL8 1130 aaKnown RBP13.15□□□□□ -0.3
NEO1-205ENST00000558886 CCDC24Q8N4L8 307 aa13.15□□□□□ -0.3
NEO1-205ENST00000558886 H7C1W4 665 aa13.14□□□□□ -0.31
NEO1-205ENST00000558886 IRS4O14654 1257 aaPredicted RBP13.14□□□□□ -0.31
NEO1-205ENST00000558886 NLGN2Q8NFZ4 835 aa13.14□□□□□ -0.31
NEO1-205ENST00000558886 NLRP3Q96P20 1036 aa13.14□□□□□ -0.31
NEO1-205ENST00000558886 COG6Q9Y2V7 657 aa13.14□□□□□ -0.31
NEO1-205ENST00000558886 PXDNLA1KZ92 1463 aa13.13□□□□□ -0.31
NEO1-205ENST00000558886 IBTKQ9P2D0 1353 aaPredicted RBP13.13□□□□□ -0.31
NEO1-205ENST00000558886 GNAI3P08754 354 aa13.13□□□□□ -0.31
NEO1-205ENST00000558886 UBTFL1P0CB47 393 aaPredicted RBP13.13□□□□□ -0.31
NEO1-205ENST00000558886 RLBP1P12271 317 aa13.13□□□□□ -0.31
NEO1-205ENST00000558886 HCLS1P14317 486 aaPredicted RBP13.13□□□□□ -0.31
NEO1-205ENST00000558886 PDE6BP35913 854 aa13.13□□□□□ -0.31
NEO1-205ENST00000558886 BRIP1Q9BX63 1249 aa13.13□□□□□ -0.31
NEO1-205ENST00000558886 DDX19BQ9UMR2 479 aa13.13□□□□□ -0.31
NEO1-205ENST00000558886 MVPQ14764 893 aaKnown RBP13.12□□□□□ -0.31
NEO1-205ENST00000558886 SLC10A5Q5PT55 438 aa13.12□□□□□ -0.31
NEO1-205ENST00000558886 C20orf194Q5TEA3 1177 aa13.12□□□□□ -0.31
NEO1-205ENST00000558886 SYNE4Q8N205 404 aa13.12□□□□□ -0.31
NEO1-205ENST00000558886 USP44Q9H0E7 712 aa13.12□□□□□ -0.31
NEO1-205ENST00000558886 H0YIN7 160 aa13.11□□□□□ -0.31
NEO1-205ENST00000558886 PDE8AO60658 829 aa13.11□□□□□ -0.31
NEO1-205ENST00000558886 PDZRN3Q9UPQ7 1066 aa13.11□□□□□ -0.31
NEO1-205ENST00000558886 CD2APQ9Y5K6 639 aa13.11□□□□□ -0.31
NEO1-205ENST00000558886 ANKRD36CQ5JPF3 1778 aa13.11□□□□□ -0.31
NEO1-205ENST00000558886 AFDNP55196 1824 aaKnown RBP13.11□□□□□ -0.31
NEO1-205ENST00000558886 CDHR2Q9BYE9 1310 aa13.11□□□□□ -0.31
NEO1-205ENST00000558886 CHD4Q14839 1912 aa13.1□□□□□ -0.31
NEO1-205ENST00000558886 GNAI2P04899 355 aa13.1□□□□□ -0.31
NEO1-205ENST00000558886 NEFLP07196 543 aa13.1□□□□□ -0.31
NEO1-205ENST00000558886 NBPF7P0C2Y1 421 aaPredicted RBP13.1□□□□□ -0.31
NEO1-205ENST00000558886 C2CD5Q86YS7 1000 aa13.1□□□□□ -0.31
NEO1-205ENST00000558886 RPGRQ92834 1020 aaKnown RBP13.1□□□□□ -0.31
NEO1-205ENST00000558886 MEIS3Q99687 375 aa13.1□□□□□ -0.31
NEO1-205ENST00000558886 CHMP3Q9Y3E7 222 aa13.1□□□□□ -0.31
NEO1-205ENST00000558886 TGFB2P61812 414 aa13.09□□□□□ -0.31
NEO1-205ENST00000558886 CCDC152Q4G0S7 254 aa13.09□□□□□ -0.31
NEO1-205ENST00000558886 ZNF622Q969S3 477 aaKnown RBP eCLIP13.09□□□□□ -0.31
NEO1-205ENST00000558886 RBM17Q96I25 401 aaKnown RBP13.09□□□□□ -0.31
NEO1-205ENST00000558886 UTYO14607 1347 aa13.09□□□□□ -0.31
NEO1-205ENST00000558886 ZBTB7BO15156 539 aaPredicted RBP13.08□□□□□ -0.32
NEO1-205ENST00000558886 DDX46Q7L014 1031 aaKnown RBP13.08□□□□□ -0.32
NEO1-205ENST00000558886 SUCLG2Q96I99 432 aa13.08□□□□□ -0.32
NEO1-205ENST00000558886 CCDC85AQ96PX6 553 aaPredicted RBP13.08□□□□□ -0.32
NEO1-205ENST00000558886 CRBNQ96SW2 442 aa13.08□□□□□ -0.32
NEO1-205ENST00000558886 PLA2G12BQ9BX93 195 aa13.08□□□□□ -0.32
NEO1-205ENST00000558886 ABCC12Q96J65 1359 aa13.07□□□□□ -0.32
NEO1-205ENST00000558886 A0A0G2JLW4 131 aa13.07□□□□□ -0.32
NEO1-205ENST00000558886 NPR1P16066 1061 aa13.07□□□□□ -0.32
NEO1-205ENST00000558886 CASP7P55210 303 aa13.07□□□□□ -0.32
NEO1-205ENST00000558886 CTSWP56202 376 aa13.07□□□□□ -0.32
NEO1-205ENST00000558886 IRX6P78412 446 aaPredicted RBP13.07□□□□□ -0.32
NEO1-205ENST00000558886 LRRFIP2Q9Y608 721 aaKnown RBP13.07□□□□□ -0.32
NEO1-205ENST00000558886 DPEP1P16444 411 aa13.06□□□□□ -0.32
NEO1-205ENST00000558886 CHRNA5P30532 468 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms