RNA–Protein interactions for RNA: ENST00000558861.1

LRRC28-209, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-209ENST00000558861 LRRIQ1Q96JM4 1722 aa9.4□□□□□ -0.9
LRRC28-209ENST00000558861 GLYCTKQ8IVS8 523 aa9.4□□□□□ -0.9
LRRC28-209ENST00000558861 DIP2BQ9P265 1576 aa9.4□□□□□ -0.9
LRRC28-209ENST00000558861 TNFRSF10BO14763 440 aa9.39□□□□□ -0.91
LRRC28-209ENST00000558861 AIDAQ96BJ3 306 aa9.39□□□□□ -0.91
LRRC28-209ENST00000558861 MYO19Q96H55 970 aa9.39□□□□□ -0.91
LRRC28-209ENST00000558861 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.39□□□□□ -0.917e-8■■■■■ 186.3
LRRC28-209ENST00000558861 CCDC9Q9Y3X0 531 aaKnown RBP9.39□□□□□ -0.91
LRRC28-209ENST00000558861 MAGI3Q5TCQ9 1506 aa9.39□□□□□ -0.91
LRRC28-209ENST00000558861 GLI2P10070 1586 aa9.38□□□□□ -0.91
LRRC28-209ENST00000558861 SOBPA7XYQ1 873 aa9.38□□□□□ -0.91
LRRC28-209ENST00000558861 MFAP1P55081 439 aaKnown RBP9.38□□□□□ -0.91
LRRC28-209ENST00000558861 FKBP4Q02790 459 aaKnown RBP eCLIP9.38□□□□□ -0.91
LRRC28-209ENST00000558861 SF3B2Q13435 895 aaKnown RBP9.38□□□□□ -0.91
LRRC28-209ENST00000558861 RTN1Q16799 776 aa9.38□□□□□ -0.91
LRRC28-209ENST00000558861 NBPF1Q3BBV0 1214 aa9.38□□□□□ -0.91
LRRC28-209ENST00000558861 KLRG1Q96E93 195 aa9.38□□□□□ -0.91
LRRC28-209ENST00000558861 BIN2Q9UBW5 565 aaPredicted RBP9.38□□□□□ -0.91
LRRC28-209ENST00000558861 CCDC18Q5T9S5 1454 aa9.37□□□□□ -0.91
LRRC28-209ENST00000558861 ATP4AP20648 1035 aa9.37□□□□□ -0.91
LRRC28-209ENST00000558861 DGKZQ13574 1117 aa9.37□□□□□ -0.91
LRRC28-209ENST00000558861 ECM1Q16610 540 aa9.37□□□□□ -0.91
LRRC28-209ENST00000558861 KLK14Q9P0G3 267 aa9.37□□□□□ -0.91
LRRC28-209ENST00000558861 MAN1A2O60476 641 aa9.36□□□□□ -0.91
LRRC28-209ENST00000558861 MPSTP25325 297 aa9.36□□□□□ -0.91
LRRC28-209ENST00000558861 CCDC27Q2M243 656 aa9.36□□□□□ -0.91
LRRC28-209ENST00000558861 WDR44Q5JSH3 913 aa9.36□□□□□ -0.91
LRRC28-209ENST00000558861 FAM26DQ5JW98 314 aa9.36□□□□□ -0.91
LRRC28-209ENST00000558861 TIMMDC1Q9NPL8 285 aa9.36□□□□□ -0.91
LRRC28-209ENST00000558861 ZDHHC3Q9NYG2 299 aa9.36□□□□□ -0.91
LRRC28-209ENST00000558861 TROQ12816 1431 aaPredicted RBP9.36□□□□□ -0.91
LRRC28-209ENST00000558861 MAP3K1Q13233 1512 aa9.36□□□□□ -0.91
LRRC28-209ENST00000558861 KIF13AQ9H1H9 1805 aa9.35□□□□□ -0.91
LRRC28-209ENST00000558861 C1orf53Q5VUE5 145 aa9.35□□□□□ -0.91
LRRC28-209ENST00000558861 RHPN1Q8TCX5 695 aa9.35□□□□□ -0.91
LRRC28-209ENST00000558861 ARHGAP4P98171 946 aa9.34□□□□□ -0.91
LRRC28-209ENST00000558861 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.34□□□□□ -0.91
LRRC28-209ENST00000558861 C7orf43Q8WVR3 580 aa9.34□□□□□ -0.91
LRRC28-209ENST00000558861 GPAMQ9HCL2 828 aa9.34□□□□□ -0.91
LRRC28-209ENST00000558861 STIM2Q9P246 746 aa9.34□□□□□ -0.91
LRRC28-209ENST00000558861 A0A1B0GTH6 734 aa9.33□□□□□ -0.92
LRRC28-209ENST00000558861 LCE2BO14633 110 aa9.33□□□□□ -0.92
LRRC28-209ENST00000558861 NPR3P17342 541 aa9.33□□□□□ -0.92
LRRC28-209ENST00000558861 TATP17735 454 aaPredicted RBP9.33□□□□□ -0.92
LRRC28-209ENST00000558861 MSX1P28360 303 aa9.33□□□□□ -0.92
LRRC28-209ENST00000558861 HSH2DQ96JZ2 352 aa9.33□□□□□ -0.92
LRRC28-209ENST00000558861 ABCA9Q8IUA7 1624 aa9.33□□□□□ -0.92
LRRC28-209ENST00000558861 TIAM1Q13009 1591 aa9.33□□□□□ -0.92
LRRC28-209ENST00000558861 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.32□□□□□ -0.92
LRRC28-209ENST00000558861 MAP3K4Q9Y6R4 1608 aa9.32□□□□□ -0.92
LRRC28-209ENST00000558861 SENP3-EIF4A1A0A087X0R7 540 aa9.32□□□□□ -0.92
LRRC28-209ENST00000558861 PLEKHD1A6NEE1 506 aa9.32□□□□□ -0.92
LRRC28-209ENST00000558861 ZBTB39O15060 712 aa9.32□□□□□ -0.92
LRRC28-209ENST00000558861 FAM13AO94988 1023 aa9.32□□□□□ -0.92
LRRC28-209ENST00000558861 C11orf91Q3C1V1 193 aa9.32□□□□□ -0.92
LRRC28-209ENST00000558861 BICDL1Q6ZP65 573 aa9.32□□□□□ -0.92
LRRC28-209ENST00000558861 ETFBKMTQ8IXQ9 262 aa9.32□□□□□ -0.92
LRRC28-209ENST00000558861 GMPR2Q9P2T1 348 aaKnown RBP9.32□□□□□ -0.92
LRRC28-209ENST00000558861 BCS1LQ9Y276 419 aa9.32□□□□□ -0.92
LRRC28-209ENST00000558861 PPRC1Q5VV67 1664 aaKnown RBP9.32□□□□□ -0.92
LRRC28-209ENST00000558861 EIF1AXP47813 144 aaKnown RBP9.31□□□□□ -0.92
LRRC28-209ENST00000558861 Q6ZNB5 142 aa9.31□□□□□ -0.92
LRRC28-209ENST00000558861 ZNF280CQ8ND82 737 aa9.31□□□□□ -0.92
LRRC28-209ENST00000558861 IFT43Q96FT9 208 aa9.31□□□□□ -0.92
LRRC28-209ENST00000558861 CFAP43Q8NDM7 1665 aa9.31□□□□□ -0.92
LRRC28-209ENST00000558861 KIF14Q15058 1648 aa9.31□□□□□ -0.92
LRRC28-209ENST00000558861 TTC37Q6PGP7 1564 aa9.3□□□□□ -0.92
LRRC28-209ENST00000558861 LRRC9Q6ZRR7 1453 aa9.3□□□□□ -0.92
LRRC28-209ENST00000558861 BRD2P25440 801 aaKnown RBP9.3□□□□□ -0.92
LRRC28-209ENST00000558861 MARSP56192 900 aaKnown RBP9.3□□□□□ -0.92
LRRC28-209ENST00000558861 ARSJQ5FYB0 599 aaPredicted RBP9.3□□□□□ -0.92
LRRC28-209ENST00000558861 ATCAYQ86WG3 371 aa9.3□□□□□ -0.92
LRRC28-209ENST00000558861 TRIM47Q96LD4 638 aa9.3□□□□□ -0.92
LRRC28-209ENST00000558861 GAS2L1Q99501 681 aaPredicted RBP9.3□□□□□ -0.92
LRRC28-209ENST00000558861 RUBCNLQ9H714 662 aa9.3□□□□□ -0.92
LRRC28-209ENST00000558861 CDK11AQ9UQ88 783 aaPredicted RBP9.3□□□□□ -0.92
LRRC28-209ENST00000558861 DYRK1BQ9Y463 629 aa9.3□□□□□ -0.92
LRRC28-209ENST00000558861 CD109Q6YHK3 1445 aa9.3□□□□□ -0.92
LRRC28-209ENST00000558861 PTSQ03393 145 aa9.29□□□□□ -0.92
LRRC28-209ENST00000558861 ABTB2Q8N961 1025 aa9.29□□□□□ -0.92
LRRC28-209ENST00000558861 SUSD3Q96L08 255 aa9.29□□□□□ -0.92
LRRC28-209ENST00000558861 ZIC5Q96T25 663 aa9.29□□□□□ -0.92
LRRC28-209ENST00000558861 SENP2Q9HC62 589 aa9.29□□□□□ -0.92
LRRC28-209ENST00000558861 EHBP1L1Q8N3D4 1523 aa9.28□□□□□ -0.92
LRRC28-209ENST00000558861 SNRPBP14678 240 aaKnown RBP9.28□□□□□ -0.92
LRRC28-209ENST00000558861 NOM1Q5C9Z4 860 aaKnown RBP9.28□□□□□ -0.92
LRRC28-209ENST00000558861 LRRC69Q6ZNQ3 347 aa9.28□□□□□ -0.92
LRRC28-209ENST00000558861 TREML1Q86YW5 311 aa9.28□□□□□ -0.92
LRRC28-209ENST00000558861 KIFC2Q96AC6 838 aa9.28□□□□□ -0.92
LRRC28-209ENST00000558861 GPC6Q9Y625 555 aaPredicted RBP9.28□□□□□ -0.92
LRRC28-209ENST00000558861 PLCH2O75038 1416 aa9.28□□□□□ -0.92
LRRC28-209ENST00000558861 COL17A1Q9UMD9 1497 aaPredicted RBP9.28□□□□□ -0.92
LRRC28-209ENST00000558861 MTUS2Q5JR59 1369 aa9.27□□□□□ -0.93
LRRC28-209ENST00000558861 ARAP3Q8WWN8 1544 aa9.27□□□□□ -0.93
LRRC28-209ENST00000558861 A0A1W2PNR3 127 aa9.27□□□□□ -0.93
LRRC28-209ENST00000558861 TGFBR3LH3BV60 316 aa9.27□□□□□ -0.93
LRRC28-209ENST00000558861 FZD6O60353 706 aa9.27□□□□□ -0.93
LRRC28-209ENST00000558861 F11P03951 625 aa9.27□□□□□ -0.93
LRRC28-209ENST00000558861 MAPK1P28482 360 aa9.27□□□□□ -0.93
LRRC28-209ENST00000558861 RGS22Q8NE09 1264 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms