RNA–Protein interactions for RNA: ENST00000558791.5

CTDSPL2-203, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-203ENST00000558791 U2AF1L5P0DN76 240 aaPredicted RBP14.02□□□□□ -0.17
CTDSPL2-203ENST00000558791 PIP4K2AP48426 406 aaPredicted RBP14.02□□□□□ -0.17
CTDSPL2-203ENST00000558791 U2AF1Q01081 240 aaKnown RBP eCLIP14.02□□□□□ -0.17
CTDSPL2-203ENST00000558791 MAP2K1Q02750 393 aaPredicted RBP14.02□□□□□ -0.17
CTDSPL2-203ENST00000558791 DEFB115Q30KQ5 88 aa14.02□□□□□ -0.17
CTDSPL2-203ENST00000558791 CRY2Q49AN0 593 aa14.02□□□□□ -0.17
CTDSPL2-203ENST00000558791 NBPF10Q6P3W6 841 aaKnown RBP14.02□□□□□ -0.17
CTDSPL2-203ENST00000558791 CNTROBQ8N137 903 aa14.02□□□□□ -0.17
CTDSPL2-203ENST00000558791 NBPF15Q8N660 670 aa14.02□□□□□ -0.17
CTDSPL2-203ENST00000558791 IBTKQ9P2D0 1353 aaPredicted RBP14.01□□□□□ -0.17
CTDSPL2-203ENST00000558791 PRAMEF22A3QJZ6 481 aa14.01□□□□□ -0.17
CTDSPL2-203ENST00000558791 NEFMP07197 916 aa14.01□□□□□ -0.17
CTDSPL2-203ENST00000558791 ATXN8OSP0DMR3 200 aa14.01□□□□□ -0.17
CTDSPL2-203ENST00000558791 EIF6P56537 245 aaKnown RBP14.01□□□□□ -0.17
CTDSPL2-203ENST00000558791 MCM10Q7L590 875 aa14.01□□□□□ -0.17
CTDSPL2-203ENST00000558791 SNED1Q8TER0 1413 aa14□□□□□ -0.17
CTDSPL2-203ENST00000558791 TRPM7Q96QT4 1865 aa14□□□□□ -0.17
CTDSPL2-203ENST00000558791 LMOD1P29536 600 aaPredicted RBP14□□□□□ -0.17
CTDSPL2-203ENST00000558791 HOXA10P31260 410 aaPredicted RBP14□□□□□ -0.17
CTDSPL2-203ENST00000558791 VPS33BQ9H267 617 aa14□□□□□ -0.17
CTDSPL2-203ENST00000558791 RNF123Q5XPI4 1314 aa13.99□□□□□ -0.17
CTDSPL2-203ENST00000558791 HLFQ16534 295 aa13.99□□□□□ -0.17
CTDSPL2-203ENST00000558791 DLG5Q8TDM6 1919 aa13.98□□□□□ -0.17
CTDSPL2-203ENST00000558791 MAP3K15Q6ZN16 1313 aa13.98□□□□□ -0.17
CTDSPL2-203ENST00000558791 CNGB1Q14028 1251 aaPredicted RBP13.98□□□□□ -0.17
CTDSPL2-203ENST00000558791 KIF6Q6ZMV9 814 aa13.98□□□□□ -0.17
CTDSPL2-203ENST00000558791 RPGRQ92834 1020 aaKnown RBP13.98□□□□□ -0.17
CTDSPL2-203ENST00000558791 CRAMP1Q96RY5 1269 aa13.98□□□□□ -0.17
CTDSPL2-203ENST00000558791 KDM3BQ7LBC6 1761 aa13.98□□□□□ -0.17
CTDSPL2-203ENST00000558791 ERBB4Q15303 1308 aa13.97□□□□□ -0.17
CTDSPL2-203ENST00000558791 WDR33Q9C0J8 1336 aaKnown RBP13.97□□□□□ -0.17
CTDSPL2-203ENST00000558791 FAM177BA6PVY3 158 aa13.97□□□□□ -0.17
CTDSPL2-203ENST00000558791 PPP2R1AP30153 589 aa13.97□□□□□ -0.17
CTDSPL2-203ENST00000558791 ECE1P42892 770 aa13.97□□□□□ -0.17
CTDSPL2-203ENST00000558791 POLA2Q14181 598 aa13.97□□□□□ -0.17
CTDSPL2-203ENST00000558791 MAP1SQ66K74 1059 aaPredicted RBP13.97□□□□□ -0.17
CTDSPL2-203ENST00000558791 USP50Q70EL3 339 aaPredicted RBP13.97□□□□□ -0.17
CTDSPL2-203ENST00000558791 RBM17Q96I25 401 aaKnown RBP13.97□□□□□ -0.17
CTDSPL2-203ENST00000558791 TMX4Q9H1E5 349 aaPredicted RBP13.97□□□□□ -0.17
CTDSPL2-203ENST00000558791 DDX21Q9NR30 783 aaKnown RBP eCLIP13.97□□□□□ -0.17
CTDSPL2-203ENST00000558791 LBX1P52954 281 aa13.96□□□□□ -0.17
CTDSPL2-203ENST00000558791 DCTN1Q14203 1278 aa13.96□□□□□ -0.17
CTDSPL2-203ENST00000558791 OLFM4Q6UX06 510 aa13.96□□□□□ -0.17
CTDSPL2-203ENST00000558791 ABT1Q9ULW3 272 aaKnown RBP13.96□□□□□ -0.17
CTDSPL2-203ENST00000558791 THSD7BQ9C0I4 1608 aa13.95□□□□□ -0.18
CTDSPL2-203ENST00000558791 HSPA8P11142 646 aaKnown RBP13.95□□□□□ -0.18
CTDSPL2-203ENST00000558791 PARP10Q53GL7 1025 aa13.95□□□□□ -0.18
CTDSPL2-203ENST00000558791 PPP1R42Q7Z4L9 355 aa13.95□□□□□ -0.18
CTDSPL2-203ENST00000558791 LARGE2Q8N3Y3 721 aa13.95□□□□□ -0.18
CTDSPL2-203ENST00000558791 BEGAINQ9BUH8 593 aa13.95□□□□□ -0.18
CTDSPL2-203ENST00000558791 PNNQ9H307 717 aaKnown RBP13.95□□□□□ -0.18
CTDSPL2-203ENST00000558791 GJA3Q9Y6H8 435 aa13.95□□□□□ -0.18
CTDSPL2-203ENST00000558791 ABCC12Q96J65 1359 aa13.95□□□□□ -0.18
CTDSPL2-203ENST00000558791 EIF4A1P60842 406 aaKnown RBP13.94□□□□□ -0.18
CTDSPL2-203ENST00000558791 GIGYF2Q6Y7W6 1299 aaKnown RBP13.94□□□□□ -0.18
CTDSPL2-203ENST00000558791 NUTM1Q86Y26 1132 aa13.94□□□□□ -0.18
CTDSPL2-203ENST00000558791 NIM1KQ8IY84 436 aa13.94□□□□□ -0.18
CTDSPL2-203ENST00000558791 ZNF34Q8IZ26 560 aa13.94□□□□□ -0.18
CTDSPL2-203ENST00000558791 SUPT20HQ8NEM7 779 aa13.94□□□□□ -0.18
CTDSPL2-203ENST00000558791 PPEF1O14829 653 aaPredicted RBP13.93□□□□□ -0.18
CTDSPL2-203ENST00000558791 SCNN1DP51172 638 aa13.93□□□□□ -0.18
CTDSPL2-203ENST00000558791 NLRP3Q96P20 1036 aa13.93□□□□□ -0.18
CTDSPL2-203ENST00000558791 RRP7AQ9Y3A4 280 aaKnown RBP13.93□□□□□ -0.18
CTDSPL2-203ENST00000558791 LTBP1Q14766 1721 aa13.93□□□□□ -0.18
CTDSPL2-203ENST00000558791 CDHR2Q9BYE9 1310 aa13.92□□□□□ -0.18
CTDSPL2-203ENST00000558791 MAP2K2P36507 400 aa13.92□□□□□ -0.18
CTDSPL2-203ENST00000558791 SUSD4Q5VX71 490 aa13.92□□□□□ -0.18
CTDSPL2-203ENST00000558791 NGEFQ8N5V2 710 aa13.92□□□□□ -0.18
CTDSPL2-203ENST00000558791 CAPNS2Q96L46 248 aa13.92□□□□□ -0.18
CTDSPL2-203ENST00000558791 ADARB2Q9NS39 739 aaKnown RBP13.92□□□□□ -0.18
CTDSPL2-203ENST00000558791 MIS18AQ9NYP9 233 aa13.92□□□□□ -0.18
CTDSPL2-203ENST00000558791 UBN2Q6ZU65 1347 aa13.91□□□□□ -0.18
CTDSPL2-203ENST00000558791 CA12O43570 354 aa13.91□□□□□ -0.18
CTDSPL2-203ENST00000558791 NTSR2O95665 410 aa13.91□□□□□ -0.18
CTDSPL2-203ENST00000558791 EPS15P42566 896 aa13.91□□□□□ -0.18
CTDSPL2-203ENST00000558791 SLC10A5Q5PT55 438 aa13.91□□□□□ -0.18
CTDSPL2-203ENST00000558791 TTLL7Q6ZT98 887 aa13.91□□□□□ -0.18
CTDSPL2-203ENST00000558791 ABHD8Q96I13 439 aa13.91□□□□□ -0.18
CTDSPL2-203ENST00000558791 HHIPL1Q96JK4 782 aa13.91□□□□□ -0.18
CTDSPL2-203ENST00000558791 GPR101Q96P66 508 aaPredicted RBP13.91□□□□□ -0.18
CTDSPL2-203ENST00000558791 ATP6V0A2Q9Y487 856 aa13.91□□□□□ -0.18
CTDSPL2-203ENST00000558791 TLL2Q9Y6L7 1015 aa13.91□□□□□ -0.18
CTDSPL2-203ENST00000558791 COL4A5P29400 1685 aa13.91□□□□□ -0.18
CTDSPL2-203ENST00000558791 PPIP5K2O43314 1243 aa13.9□□□□□ -0.18
CTDSPL2-203ENST00000558791 BBOX1O75936 387 aa13.9□□□□□ -0.18
CTDSPL2-203ENST00000558791 MYL6BP14649 208 aa13.9□□□□□ -0.18
CTDSPL2-203ENST00000558791 NFE2L2Q16236 605 aa13.9□□□□□ -0.18
CTDSPL2-203ENST00000558791 ZC3H15Q8WU90 426 aaKnown RBP13.9□□□□□ -0.18
CTDSPL2-203ENST00000558791 RTFDC1Q9BY42 306 aaPredicted RBP13.9□□□□□ -0.18
CTDSPL2-203ENST00000558791 ZBTB3Q9H5J0 574 aa13.9□□□□□ -0.18
CTDSPL2-203ENST00000558791 BABAM1Q9NWV8 329 aa13.9□□□□□ -0.18
CTDSPL2-203ENST00000558791 GPRC5DQ9NZD1 345 aa13.9□□□□□ -0.18
CTDSPL2-203ENST00000558791 ANKRD36CQ5JPF3 1778 aa13.9□□□□□ -0.18
CTDSPL2-203ENST00000558791 GPTP24298 496 aa13.89□□□□□ -0.19
CTDSPL2-203ENST00000558791 HSP90AB3PQ58FF7 597 aa13.89□□□□□ -0.19
CTDSPL2-203ENST00000558791 CST9Q5W186 159 aa13.89□□□□□ -0.19
CTDSPL2-203ENST00000558791 PLEKHF1Q96S99 279 aa13.89□□□□□ -0.19
CTDSPL2-203ENST00000558791 UTP14AQ9BVJ6 771 aaKnown RBP13.89□□□□□ -0.19
CTDSPL2-203ENST00000558791 PGAP2Q9UHJ9 254 aa13.89□□□□□ -0.19
CTDSPL2-203ENST00000558791 ZNRF3Q9ULT6 936 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms