RNA–Protein interactions for RNA: ENST00000558752.1

RPL28-206, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-206ENST00000558752 LAMB4A4D0S4 1761 aa20.03■□□□□ 0.8
RPL28-206ENST00000558752 ZNF541Q9H0D2 1346 aa20.02■□□□□ 0.8
RPL28-206ENST00000558752 WDR43Q15061 677 aaKnown RBP eCLIP20.02■□□□□ 0.8
RPL28-206ENST00000558752 RBM17Q96I25 401 aaKnown RBP20.02■□□□□ 0.8
RPL28-206ENST00000558752 IBTKQ9P2D0 1353 aaPredicted RBP20.02■□□□□ 0.8
RPL28-206ENST00000558752 ERBB4Q15303 1308 aa20.02■□□□□ 0.79
RPL28-206ENST00000558752 ITGBL1O95965 494 aaPredicted RBP20.01■□□□□ 0.79
RPL28-206ENST00000558752 HOXA10P31260 410 aaPredicted RBP20.01■□□□□ 0.79
RPL28-206ENST00000558752 EIF4A1P60842 406 aaKnown RBP20.01■□□□□ 0.79
RPL28-206ENST00000558752 PPP1R42Q7Z4L9 355 aa20.01■□□□□ 0.79
RPL28-206ENST00000558752 VEGFBP49765 207 aa20■□□□□ 0.79
RPL28-206ENST00000558752 OLFM4Q6UX06 510 aa20■□□□□ 0.79
RPL28-206ENST00000558752 NUTM1Q86Y26 1132 aa20■□□□□ 0.79
RPL28-206ENST00000558752 CNTROBQ8N137 903 aa20■□□□□ 0.79
RPL28-206ENST00000558752 RNF123Q5XPI4 1314 aa20■□□□□ 0.79
RPL28-206ENST00000558752 MYL6BP14649 208 aa19.99■□□□□ 0.79
RPL28-206ENST00000558752 CTCFP49711 727 aaPredicted RBP19.99■□□□□ 0.79
RPL28-206ENST00000558752 LMOD3Q0VAK6 560 aa19.99■□□□□ 0.79
RPL28-206ENST00000558752 PARP10Q53GL7 1025 aa19.99■□□□□ 0.79
RPL28-206ENST00000558752 CRAMP1Q96RY5 1269 aa19.99■□□□□ 0.79
RPL28-206ENST00000558752 PRDM10Q9NQV6 1147 aa19.99■□□□□ 0.79
RPL28-206ENST00000558752 RIC1Q4ADV7 1423 aa19.99■□□□□ 0.79
RPL28-206ENST00000558752 DEFB115Q30KQ5 88 aa19.98■□□□□ 0.79
RPL28-206ENST00000558752 LARGE2Q8N3Y3 721 aa19.98■□□□□ 0.79
RPL28-206ENST00000558752 RUNDC1Q96C34 613 aa19.98■□□□□ 0.79
RPL28-206ENST00000558752 NLRP3Q96P20 1036 aa19.98■□□□□ 0.79
RPL28-206ENST00000558752 GJA3Q9Y6H8 435 aa19.98■□□□□ 0.79
RPL28-206ENST00000558752 NUP98P52948 1817 aa19.97■□□□□ 0.79
RPL28-206ENST00000558752 GPTP24298 496 aa19.97■□□□□ 0.79
RPL28-206ENST00000558752 LBX1P52954 281 aa19.97■□□□□ 0.79
RPL28-206ENST00000558752 RIPK4P57078 832 aa19.97■□□□□ 0.79
RPL28-206ENST00000558752 GIGYF2Q6Y7W6 1299 aaKnown RBP19.97■□□□□ 0.79
RPL28-206ENST00000558752 TTLL7Q6ZT98 887 aa19.97■□□□□ 0.79
RPL28-206ENST00000558752 VPS33BQ9H267 617 aa19.97■□□□□ 0.79
RPL28-206ENST00000558752 ZBTB3Q9H5J0 574 aa19.97■□□□□ 0.79
RPL28-206ENST00000558752 BABAM1Q9NWV8 329 aa19.97■□□□□ 0.79
RPL28-206ENST00000558752 KDM3BQ7LBC6 1761 aa19.97■□□□□ 0.79
RPL28-206ENST00000558752 PPEF1O14829 653 aaPredicted RBP19.96■□□□□ 0.79
RPL28-206ENST00000558752 TMPOP42166 694 aaKnown RBP19.96■□□□□ 0.79
RPL28-206ENST00000558752 NIM1KQ8IY84 436 aa19.96■□□□□ 0.79
RPL28-206ENST00000558752 ZNF34Q8IZ26 560 aa19.96■□□□□ 0.79
RPL28-206ENST00000558752 ABCC12Q96J65 1359 aa19.95■□□□□ 0.79
RPL28-206ENST00000558752 RASSF10A6NK89 507 aa19.95■□□□□ 0.78
RPL28-206ENST00000558752 SUSD4Q5VX71 490 aa19.95■□□□□ 0.78
RPL28-206ENST00000558752 MAP1SQ66K74 1059 aaPredicted RBP19.95■□□□□ 0.78
RPL28-206ENST00000558752 SUPT20HQ8NEM7 779 aa19.95■□□□□ 0.78
RPL28-206ENST00000558752 TSPYL4Q9UJ04 414 aa19.95■□□□□ 0.78
RPL28-206ENST00000558752 ADAMTS8Q9UP79 889 aa19.95■□□□□ 0.78
RPL28-206ENST00000558752 DLG5Q8TDM6 1919 aa19.95■□□□□ 0.78
RPL28-206ENST00000558752 MAP2K1Q02750 393 aaPredicted RBP19.94■□□□□ 0.78
RPL28-206ENST00000558752 WBP1LQ9NX94 342 aa19.94■□□□□ 0.78
RPL28-206ENST00000558752 ABT1Q9ULW3 272 aaKnown RBP19.94■□□□□ 0.78
RPL28-206ENST00000558752 SLC34A2O95436 690 aa19.93■□□□□ 0.78
RPL28-206ENST00000558752 HSP90AB3PQ58FF7 597 aa19.93■□□□□ 0.78
RPL28-206ENST00000558752 USP50Q70EL3 339 aaPredicted RBP19.93■□□□□ 0.78
RPL28-206ENST00000558752 UTP14AQ9BVJ6 771 aaKnown RBP19.93■□□□□ 0.78
RPL28-206ENST00000558752 UBN2Q6ZU65 1347 aa19.93■□□□□ 0.78
RPL28-206ENST00000558752 NTSR2O95665 410 aa19.92■□□□□ 0.78
RPL28-206ENST00000558752 ECE1P42892 770 aa19.92■□□□□ 0.78
RPL28-206ENST00000558752 DDX21Q9NR30 783 aaKnown RBP eCLIP19.92■□□□□ 0.78
RPL28-206ENST00000558752 ADAMTSL1Q8N6G6 1762 aa19.92■□□□□ 0.78
RPL28-206ENST00000558752 SNED1Q8TER0 1413 aa19.92■□□□□ 0.78
RPL28-206ENST00000558752 PPIP5K2O43314 1243 aa19.91■□□□□ 0.78
RPL28-206ENST00000558752 ANP32CO43423 234 aa19.91■□□□□ 0.78
RPL28-206ENST00000558752 SLC10A5Q5PT55 438 aa19.91■□□□□ 0.78
RPL28-206ENST00000558752 THUMPD2Q9BTF0 503 aaKnown RBP19.91■□□□□ 0.78
RPL28-206ENST00000558752 ATP6V0A2Q9Y487 856 aa19.91■□□□□ 0.78
RPL28-206ENST00000558752 WDR33Q9C0J8 1336 aaKnown RBP19.91■□□□□ 0.78
RPL28-206ENST00000558752 TCERG1O14776 1098 aaKnown RBP19.9■□□□□ 0.78
RPL28-206ENST00000558752 BBOX1O75936 387 aa19.9■□□□□ 0.78
RPL28-206ENST00000558752 HSPA8P11142 646 aaKnown RBP19.9■□□□□ 0.78
RPL28-206ENST00000558752 EIF2S2P20042 333 aaKnown RBP19.9■□□□□ 0.78
RPL28-206ENST00000558752 BEGAINQ9BUH8 593 aa19.9■□□□□ 0.78
RPL28-206ENST00000558752 FMR1Q06787 632 aaKnown RBP eCLIP19.89■□□□□ 0.77
RPL28-206ENST00000558752 FAM161AQ3B820 660 aa19.89■□□□□ 0.77
RPL28-206ENST00000558752 ABHD8Q96I13 439 aa19.89■□□□□ 0.77
RPL28-206ENST00000558752 SCNN1DP51172 638 aa19.88■□□□□ 0.77
RPL28-206ENST00000558752 CCDC146Q8IYE0 955 aa19.88■□□□□ 0.77
RPL28-206ENST00000558752 ZNRF3Q9ULT6 936 aa19.88■□□□□ 0.77
RPL28-206ENST00000558752 EPS15P42566 896 aa19.87■□□□□ 0.77
RPL28-206ENST00000558752 PAXIP1Q6ZW49 1069 aaPredicted RBP19.87■□□□□ 0.77
RPL28-206ENST00000558752 SP8Q8IXZ3 490 aa19.87■□□□□ 0.77
RPL28-206ENST00000558752 ADARB2Q9NS39 739 aaKnown RBP19.87■□□□□ 0.77
RPL28-206ENST00000558752 NEUROD2Q15784 382 aa19.86■□□□□ 0.77
RPL28-206ENST00000558752 DPP8Q6V1X1 898 aaPredicted RBP19.86■□□□□ 0.77
RPL28-206ENST00000558752 DDX46Q7L014 1031 aaKnown RBP19.86■□□□□ 0.77
RPL28-206ENST00000558752 TMC4Q7Z404 712 aa19.86■□□□□ 0.77
RPL28-206ENST00000558752 MPNDQ8N594 471 aa19.86■□□□□ 0.77
RPL28-206ENST00000558752 CDHR2Q9BYE9 1310 aa19.85■□□□□ 0.77
RPL28-206ENST00000558752 TNIP1Q15025 636 aa19.85■□□□□ 0.77
RPL28-206ENST00000558752 AOC3Q16853 763 aa19.85■□□□□ 0.77
RPL28-206ENST00000558752 RTFDC1Q9BY42 306 aaPredicted RBP19.85■□□□□ 0.77
RPL28-206ENST00000558752 GPRC5DQ9NZD1 345 aa19.85■□□□□ 0.77
RPL28-206ENST00000558752 ABCC4O15439 1325 aa19.84■□□□□ 0.77
RPL28-206ENST00000558752 PDIA6Q15084 440 aa19.84■□□□□ 0.77
RPL28-206ENST00000558752 SLC51AQ86UW1 340 aa19.84■□□□□ 0.77
RPL28-206ENST00000558752 CAPNS2Q96L46 248 aa19.84■□□□□ 0.77
RPL28-206ENST00000558752 BCL2L13Q9BXK5 485 aa19.84■□□□□ 0.77
RPL28-206ENST00000558752 TRIM35Q9UPQ4 493 aa19.84■□□□□ 0.77
RPL28-206ENST00000558752 SH3TC1Q8TE82 1336 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms