RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 DDX46Q7L014 1031 aaKnown RBP13.11□□□□□ -0.31
CSPG4P5-201ENST00000558731 PUS3Q9BZE2 481 aaKnown RBP13.11□□□□□ -0.31
CSPG4P5-201ENST00000558731 GZF1Q9H116 711 aaPredicted RBP13.11□□□□□ -0.31
CSPG4P5-201ENST00000558731 CNNM1Q9NRU3 951 aa13.11□□□□□ -0.31
CSPG4P5-201ENST00000558731 HCLS1P14317 486 aaPredicted RBP13.1□□□□□ -0.31
CSPG4P5-201ENST00000558731 RBM25P49756 843 aaKnown RBP13.1□□□□□ -0.31
CSPG4P5-201ENST00000558731 TCIRG1Q13488 830 aa13.1□□□□□ -0.31
CSPG4P5-201ENST00000558731 PXDNLA1KZ92 1463 aa13.1□□□□□ -0.31
CSPG4P5-201ENST00000558731 LOC102724428A0A0B4J2F2 783 aa13.1□□□□□ -0.31
CSPG4P5-201ENST00000558731 SIK1P57059 783 aa13.1□□□□□ -0.31
CSPG4P5-201ENST00000558731 CCDC24Q8N4L8 307 aa13.1□□□□□ -0.31
CSPG4P5-201ENST00000558731 UBE2Q2Q8WVN8 375 aa13.1□□□□□ -0.31
CSPG4P5-201ENST00000558731 FKBP4Q02790 459 aaKnown RBP eCLIP13.1□□□□□ -0.31
CSPG4P5-201ENST00000558731 PTPN12Q05209 780 aaKnown RBP13.1□□□□□ -0.31
CSPG4P5-201ENST00000558731 LRP10Q7Z4F1 713 aa13.1□□□□□ -0.31
CSPG4P5-201ENST00000558731 CCDC191Q8NCU4 936 aa13.1□□□□□ -0.31
CSPG4P5-201ENST00000558731 TAOK2Q9UL54 1235 aa13.1□□□□□ -0.31
CSPG4P5-201ENST00000558731 PHF14O94880 888 aa13.09□□□□□ -0.31
CSPG4P5-201ENST00000558731 HELBQ8NG08 1087 aaPredicted RBP13.09□□□□□ -0.31
CSPG4P5-201ENST00000558731 PI4K2BQ8TCG2 481 aa13.09□□□□□ -0.31
CSPG4P5-201ENST00000558731 IL25Q9H293 177 aa13.09□□□□□ -0.31
CSPG4P5-201ENST00000558731 IFIT5Q13325 482 aaKnown RBP13.09□□□□□ -0.31
CSPG4P5-201ENST00000558731 PTF1AQ7RTS3 328 aa13.09□□□□□ -0.31
CSPG4P5-201ENST00000558731 OSBPL3Q9H4L5 887 aa13.09□□□□□ -0.31
CSPG4P5-201ENST00000558731 CEP126Q9P2H0 1117 aa13.09□□□□□ -0.31
CSPG4P5-201ENST00000558731 PALD1Q9ULE6 856 aa13.09□□□□□ -0.31
CSPG4P5-201ENST00000558731 KDM3BQ7LBC6 1761 aa13.09□□□□□ -0.31
CSPG4P5-201ENST00000558731 K7ELQ4 463 aaPredicted RBP13.09□□□□□ -0.31
CSPG4P5-201ENST00000558731 CYP19A1P11511 503 aaPredicted RBP13.08□□□□□ -0.32
CSPG4P5-201ENST00000558731 CRKLP46109 303 aaKnown RBP13.08□□□□□ -0.32
CSPG4P5-201ENST00000558731 RABEP1Q15276 862 aa13.08□□□□□ -0.32
CSPG4P5-201ENST00000558731 MTX1Q13505 466 aa13.08□□□□□ -0.32
CSPG4P5-201ENST00000558731 FAM227BQ96M60 508 aa13.08□□□□□ -0.32
CSPG4P5-201ENST00000558731 IRS4O14654 1257 aaPredicted RBP13.08□□□□□ -0.32
CSPG4P5-201ENST00000558731 TNNI3KQ59H18 835 aa13.08□□□□□ -0.32
CSPG4P5-201ENST00000558731 LDHAL6AQ6ZMR3 332 aa13.08□□□□□ -0.32
CSPG4P5-201ENST00000558731 CDCA7Q9BWT1 371 aaPredicted RBP13.08□□□□□ -0.32
CSPG4P5-201ENST00000558731 NIP7Q9Y221 180 aaKnown RBP eCLIP13.08□□□□□ -0.32
CSPG4P5-201ENST00000558731 FPGT-TNNI3KV9GXZ4 949 aa13.08□□□□□ -0.32
CSPG4P5-201ENST00000558731 ERBB4Q15303 1308 aa13.07□□□□□ -0.32
CSPG4P5-201ENST00000558731 GOLIM4O00461 696 aa13.07□□□□□ -0.32
CSPG4P5-201ENST00000558731 CPA1P15085 419 aa13.07□□□□□ -0.32
CSPG4P5-201ENST00000558731 HSPA1LP34931 641 aa13.07□□□□□ -0.32
CSPG4P5-201ENST00000558731 METTL24Q5JXM2 366 aa13.07□□□□□ -0.32
CSPG4P5-201ENST00000558731 RUFY2Q8WXA3 655 aa13.07□□□□□ -0.32
CSPG4P5-201ENST00000558731 DBNLQ9UJU6 430 aaKnown RBP13.07□□□□□ -0.32
CSPG4P5-201ENST00000558731 SPATA31A5Q5VU36 1347 aa13.07□□□□□ -0.32
CSPG4P5-201ENST00000558731 SPATA31A7Q8IWB4 1347 aa13.07□□□□□ -0.32
CSPG4P5-201ENST00000558731 CHGBP05060 677 aa13.07□□□□□ -0.32
CSPG4P5-201ENST00000558731 PRPF40BQ6NWY9 871 aaKnown RBP13.07□□□□□ -0.32
CSPG4P5-201ENST00000558731 STAP2Q9UGK3 403 aa13.07□□□□□ -0.32
CSPG4P5-201ENST00000558731 NAP1L2Q9ULW6 460 aaPredicted RBP13.07□□□□□ -0.32
CSPG4P5-201ENST00000558731 MAP3K15Q6ZN16 1313 aa13.07□□□□□ -0.32
CSPG4P5-201ENST00000558731 CCDC87Q9NVE4 849 aa13.06□□□□□ -0.32
CSPG4P5-201ENST00000558731 CHMP5Q9NZZ3 219 aa13.06□□□□□ -0.32
CSPG4P5-201ENST00000558731 H7C1W4 665 aa13.06□□□□□ -0.32
CSPG4P5-201ENST00000558731 GIGYF2Q6Y7W6 1299 aaKnown RBP13.06□□□□□ -0.32
CSPG4P5-201ENST00000558731 KIF2CQ99661 725 aa13.06□□□□□ -0.32
CSPG4P5-201ENST00000558731 NMIQ13287 307 aaPredicted RBP13.05□□□□□ -0.32
CSPG4P5-201ENST00000558731 SLFNL1Q499Z3 407 aa13.05□□□□□ -0.32
CSPG4P5-201ENST00000558731 HSP90AB3PQ58FF7 597 aa13.05□□□□□ -0.32
CSPG4P5-201ENST00000558731 SCN11AQ9UI33 1791 aa13.05□□□□□ -0.32
CSPG4P5-201ENST00000558731 TCEANC2Q96MN5 208 aa13.05□□□□□ -0.32
CSPG4P5-201ENST00000558731 CACNA1FO60840 1977 aa13.05□□□□□ -0.32
CSPG4P5-201ENST00000558731 TTC41PQ6P2S7 1318 aa13.05□□□□□ -0.32
CSPG4P5-201ENST00000558731 PALLDQ8WX93 1383 aa13.05□□□□□ -0.32
CSPG4P5-201ENST00000558731 FOXO4P98177 505 aa13.05□□□□□ -0.32
CSPG4P5-201ENST00000558731 ITPK1Q13572 414 aa13.05□□□□□ -0.32
CSPG4P5-201ENST00000558731 EVI5LQ96CN4 794 aa13.05□□□□□ -0.32
CSPG4P5-201ENST00000558731 GREM2Q9H772 168 aa13.05□□□□□ -0.32
CSPG4P5-201ENST00000558731 SALL3Q9BXA9 1300 aa13.05□□□□□ -0.32
CSPG4P5-201ENST00000558731 ITGA6P23229 1130 aa13.04□□□□□ -0.32
CSPG4P5-201ENST00000558731 FGD1P98174 961 aa13.04□□□□□ -0.32
CSPG4P5-201ENST00000558731 WASHC4Q2M389 1173 aa13.04□□□□□ -0.32
CSPG4P5-201ENST00000558731 TTC39AQ5SRH9 613 aa13.04□□□□□ -0.32
CSPG4P5-201ENST00000558731 CCDC129Q6ZRS4 1044 aa13.04□□□□□ -0.32
CSPG4P5-201ENST00000558731 COPRSQ9NQ92 184 aa13.04□□□□□ -0.32
CSPG4P5-201ENST00000558731 EYA2O00167 538 aa13.04□□□□□ -0.32
CSPG4P5-201ENST00000558731 NLRP10Q86W26 655 aa13.04□□□□□ -0.32
CSPG4P5-201ENST00000558731 A0A1B0GUL7 405 aa13.04□□□□□ -0.32
CSPG4P5-201ENST00000558731 IFIT1P09914 478 aaKnown RBP13.04□□□□□ -0.32
CSPG4P5-201ENST00000558731 NCLP19338 710 aaKnown RBP13.04□□□□□ -0.32
CSPG4P5-201ENST00000558731 VSIG10Q8N0Z9 540 aa13.04□□□□□ -0.32
CSPG4P5-201ENST00000558731 SNAP23O00161 211 aa13.03□□□□□ -0.32
CSPG4P5-201ENST00000558731 MPHOSPH8Q99549 860 aa13.03□□□□□ -0.32
CSPG4P5-201ENST00000558731 C5P01031 1676 aa13.03□□□□□ -0.32
CSPG4P5-201ENST00000558731 GLIPR1L2Q4G1C9 344 aa13.03□□□□□ -0.32
CSPG4P5-201ENST00000558731 THRAP3Q9Y2W1 955 aaKnown RBP13.03□□□□□ -0.32
CSPG4P5-201ENST00000558731 BCL9O00512 1426 aa13.03□□□□□ -0.32
CSPG4P5-201ENST00000558731 ANKRD18BA2A2Z9 1011 aa13.03□□□□□ -0.32
CSPG4P5-201ENST00000558731 GNPATO15228 680 aa13.03□□□□□ -0.32
CSPG4P5-201ENST00000558731 IL15P40933 162 aaPredicted RBP13.03□□□□□ -0.32
CSPG4P5-201ENST00000558731 JAKMIP1Q96N16 626 aaKnown RBP13.03□□□□□ -0.32
CSPG4P5-201ENST00000558731 SEC62Q99442 399 aaKnown RBP13.03□□□□□ -0.32
CSPG4P5-201ENST00000558731 UTYO14607 1347 aa13.03□□□□□ -0.32
CSPG4P5-201ENST00000558731 VIRMAQ69YN4 1812 aaKnown RBP13.03□□□□□ -0.32
CSPG4P5-201ENST00000558731 SGSM2O43147 1006 aa13.02□□□□□ -0.32
CSPG4P5-201ENST00000558731 CASTP20810 708 aaKnown RBP13.02□□□□□ -0.32
CSPG4P5-201ENST00000558731 PTH1RQ03431 593 aa13.02□□□□□ -0.32
CSPG4P5-201ENST00000558731 ZGPATQ8N5A5 531 aaKnown RBP13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms