RNA–Protein interactions for RNA: ENST00000558685.1

SHF-204, Transcript of Src homology 2 domain containing F, humanhuman

TSL 4

Gene SHF, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-204ENST00000558685 NFKBIEO00221 500 aa15.16■□□□□ 0.02
SHF-204ENST00000558685 C21orf2O43822 256 aa15.16■□□□□ 0.02
SHF-204ENST00000558685 VAMP4O75379 141 aa15.16■□□□□ 0.02
SHF-204ENST00000558685 NPR1P16066 1061 aa15.16■□□□□ 0.02
SHF-204ENST00000558685 HSP90AB3PQ58FF7 597 aa15.16■□□□□ 0.02
SHF-204ENST00000558685 SLC10A5Q5PT55 438 aa15.16■□□□□ 0.02
SHF-204ENST00000558685 PRPF40BQ6NWY9 871 aaKnown RBP15.16■□□□□ 0.02
SHF-204ENST00000558685 PPP1R42Q7Z4L9 355 aa15.16■□□□□ 0.02
SHF-204ENST00000558685 CNKSR1Q969H4 720 aa15.16■□□□□ 0.02
SHF-204ENST00000558685 UTP14AQ9BVJ6 771 aaKnown RBP15.16■□□□□ 0.02
SHF-204ENST00000558685 ZNF219Q9P2Y4 722 aaPredicted RBP15.16■□□□□ 0.02
SHF-204ENST00000558685 RIC1Q4ADV7 1423 aa15.16■□□□□ 0.02
SHF-204ENST00000558685 RASSF7Q02833 373 aa15.15■□□□□ 0.02
SHF-204ENST00000558685 C9orf131Q5VYM1 1079 aa15.15■□□□□ 0.02
SHF-204ENST00000558685 DIEXFQ68CQ4 756 aaKnown RBP15.15■□□□□ 0.02
SHF-204ENST00000558685 G2E3Q7L622 706 aa15.15■□□□□ 0.02
SHF-204ENST00000558685 ANKRD36CQ5JPF3 1778 aa15.14■□□□□ 0.01
SHF-204ENST00000558685 GOLGA2Q08379 1002 aa15.14■□□□□ 0.01
SHF-204ENST00000558685 TRIM28Q13263 835 aaKnown RBP15.14■□□□□ 0.01
SHF-204ENST00000558685 OLFM4Q6UX06 510 aa15.14■□□□□ 0.01
SHF-204ENST00000558685 SLC4A2P04920 1241 aa15.13■□□□□ 0.01
SHF-204ENST00000558685 HCLS1P14317 486 aaPredicted RBP15.13■□□□□ 0.01
SHF-204ENST00000558685 HOXA10P31260 410 aaPredicted RBP15.13■□□□□ 0.01
SHF-204ENST00000558685 RIC3Q7Z5B4 369 aa15.13■□□□□ 0.01
SHF-204ENST00000558685 SLC51AQ86UW1 340 aa15.13■□□□□ 0.01
SHF-204ENST00000558685 TRMT112Q9UI30 125 aaKnown RBP15.13■□□□□ 0.01
SHF-204ENST00000558685 CHMP4AQ9BY43 222 aa15.12■□□□□ 0.01
SHF-204ENST00000558685 MYH16Q9H6N6 1097 aa15.12■□□□□ 0.01
SHF-204ENST00000558685 RNF123Q5XPI4 1314 aa15.12■□□□□ 0.01
SHF-204ENST00000558685 SBF1O95248 1867 aa15.12■□□□□ 0.01
SHF-204ENST00000558685 ARFGEF2Q9Y6D5 1785 aa15.11■□□□□ 0.01
SHF-204ENST00000558685 PI4KAP2A4QPH2 592 aa15.11■□□□□ 0.01
SHF-204ENST00000558685 PI4KAP1Q8N8J0 262 aa15.11■□□□□ 0.01
SHF-204ENST00000558685 FAM89AQ96GI7 184 aa15.11■□□□□ 0.01
SHF-204ENST00000558685 METTL22Q9BUU2 404 aaPredicted RBP15.11■□□□□ 0.01
SHF-204ENST00000558685 STK31Q9BXU1 1019 aa15.11■□□□□ 0.01
SHF-204ENST00000558685 RNF181Q9P0P0 153 aa15.11■□□□□ 0.01
SHF-204ENST00000558685 SH3TC1Q8TE82 1336 aa15.11■□□□□ 0.01
SHF-204ENST00000558685 ALDH1B1P30837 517 aa15.1■□□□□ 0.01
SHF-204ENST00000558685 KSR2Q6VAB6 950 aa15.1■□□□□ 0.01
SHF-204ENST00000558685 ZNF526Q8TF50 670 aaPredicted RBP15.1■□□□□ 0.01
SHF-204ENST00000558685 CDCA7LQ96GN5 454 aa15.1■□□□□ 0.01
SHF-204ENST00000558685 NLRP3Q96P20 1036 aa15.1■□□□□ 0.01
SHF-204ENST00000558685 MYD88Q99836 296 aa15.1■□□□□ 0.01
SHF-204ENST00000558685 MAP3K2Q9Y2U5 619 aa15.1■□□□□ 0.01
SHF-204ENST00000558685 FER1L6Q2WGJ9 1857 aa15.1■□□□□ 0.01
SHF-204ENST00000558685 SNED1Q8TER0 1413 aa15.09■□□□□ 0.01
SHF-204ENST00000558685 IGKV5-2P06315 115 aa15.09■□□□□ 0.01
SHF-204ENST00000558685 LMNB1P20700 586 aa15.09■□□□□ 0.01
SHF-204ENST00000558685 SLFN5Q08AF3 891 aa15.09■□□□□ 0.01
SHF-204ENST00000558685 RPGRQ92834 1020 aaKnown RBP15.09■□□□□ 0.01
SHF-204ENST00000558685 CRAMP1Q96RY5 1269 aa15.09■□□□□ 0.01
SHF-204ENST00000558685 CACNA1SQ13698 1873 aa15.09■□□□□ 0.01
SHF-204ENST00000558685 LTBP3Q9NS15 1303 aa15.09■□□□□ 0.01
SHF-204ENST00000558685 DDX58O95786 925 aaKnown RBP15.08■□□□□ 0
SHF-204ENST00000558685 FLIIQ13045 1269 aa15.08■□□□□ 0
SHF-204ENST00000558685 RTL5Q5HYW3 569 aaPredicted RBP15.08■□□□□ 0
SHF-204ENST00000558685 CCDC93Q567U6 631 aa15.07■□□□□ 0
SHF-204ENST00000558685 TRMT2AQ8IZ69 625 aaKnown RBP15.07■□□□□ 0
SHF-204ENST00000558685 CCDC191Q8NCU4 936 aa15.07■□□□□ 0
SHF-204ENST00000558685 JARID2Q92833 1246 aaPredicted RBP15.07■□□□□ 0
SHF-204ENST00000558685 RBM17Q96I25 401 aaKnown RBP15.07■□□□□ 0
SHF-204ENST00000558685 TAOK3Q9H2K8 898 aa15.07■□□□□ 0
SHF-204ENST00000558685 GPBP1L1Q9HC44 474 aaPredicted RBP15.07■□□□□ 0
SHF-204ENST00000558685 LAMB2P55268 1798 aa15.06■□□□□ 0
SHF-204ENST00000558685 E9PSI1 815 aa15.06■□□□□ 0
SHF-204ENST00000558685 SOGA3Q5TF21 947 aa15.06■□□□□ 0
SHF-204ENST00000558685 ZBTB38Q8NAP3 1195 aaPredicted RBP15.06■□□□□ 0
SHF-204ENST00000558685 ABCC4O15439 1325 aa15.06■□□□□ 0
SHF-204ENST00000558685 DDX60Q8IY21 1712 aaKnown RBP15.06■□□□□ 0
SHF-204ENST00000558685 IRS4O14654 1257 aaPredicted RBP15.05■□□□□ -0
SHF-204ENST00000558685 PCCAP05165 728 aaPredicted RBP15.05■□□□□ -0
SHF-204ENST00000558685 SF3B3Q15393 1217 aaKnown RBP15.05■□□□□ -0
SHF-204ENST00000558685 CWF19L2Q2TBE0 894 aaKnown RBP15.05■□□□□ -0
SHF-204ENST00000558685 CWC25Q9NXE8 425 aaPredicted RBP15.05■□□□□ -0
SHF-204ENST00000558685 CCDC88AQ3V6T2 1871 aa15.04■□□□□ -0
SHF-204ENST00000558685 COL4A1P02462 1669 aa15.04■□□□□ -0
SHF-204ENST00000558685 NEURL1BA8MQ27 555 aa15.04■□□□□ -0
SHF-204ENST00000558685 KIF3CO14782 793 aa15.04■□□□□ -0
SHF-204ENST00000558685 PPEF1O14829 653 aaPredicted RBP15.04■□□□□ -0
SHF-204ENST00000558685 FKBP4Q02790 459 aaKnown RBP eCLIP15.04■□□□□ -0
SHF-204ENST00000558685 FKBP5Q13451 457 aaPredicted RBP15.04■□□□□ -0
SHF-204ENST00000558685 NMRK2Q9NPI5 230 aa15.04■□□□□ -0
SHF-204ENST00000558685 F6X3S4 739 aa15.03■□□□□ -0
SHF-204ENST00000558685 RTKN2Q8IZC4 609 aa15.03■□□□□ -0
SHF-204ENST00000558685 DNAAF4Q8WXU2 420 aa15.03■□□□□ -0
SHF-204ENST00000558685 ZNF277Q9NRM2 450 aaPredicted RBP15.03■□□□□ -0
SHF-204ENST00000558685 ATP6V0A2Q9Y487 856 aa15.03■□□□□ -0
SHF-204ENST00000558685 TAF1P21675 1872 aa15.03■□□□□ -0
SHF-204ENST00000558685 CACNA1FO60840 1977 aa15.02■□□□□ -0
SHF-204ENST00000558685 ZC3H4Q9UPT8 1303 aaKnown RBP15.02■□□□□ -0
SHF-204ENST00000558685 BBOX1O75936 387 aa15.02■□□□□ -0
SHF-204ENST00000558685 GRAPQ13588 217 aa15.02■□□□□ -0
SHF-204ENST00000558685 CC2D2BQ6DHV5 1058 aa15.02■□□□□ -0
SHF-204ENST00000558685 GRAPLQ8TC17 118 aaPredicted RBP15.02■□□□□ -0
SHF-204ENST00000558685 CELF1Q92879 486 aaKnown RBP15.02■□□□□ -0
SHF-204ENST00000558685 PSMD1Q99460 953 aa15.02■□□□□ -0
SHF-204ENST00000558685 H7C1W4 665 aa15.01□□□□□ -0.01
SHF-204ENST00000558685 CASP7P55210 303 aa15.01□□□□□ -0.01
SHF-204ENST00000558685 NEXNQ0ZGT2 675 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms