RNA–Protein interactions for RNA: ENST00000558562.1

TMED3-205, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 938 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-205ENST00000558562 GAS2L2Q8NHY3 880 aa17.46■□□□□ 0.39
TMED3-205ENST00000558562 WDR33Q9C0J8 1336 aaKnown RBP17.46■□□□□ 0.38
TMED3-205ENST00000558562 SLFN5Q08AF3 891 aa17.45■□□□□ 0.38
TMED3-205ENST00000558562 NEUROD2Q15784 382 aa17.45■□□□□ 0.38
TMED3-205ENST00000558562 CCDC27Q2M243 656 aa17.45■□□□□ 0.38
TMED3-205ENST00000558562 PNMA8AQ86V59 439 aaPredicted RBP17.45■□□□□ 0.38
TMED3-205ENST00000558562 WWC1Q8IX03 1113 aa17.45■□□□□ 0.38
TMED3-205ENST00000558562 SYNE4Q8N205 404 aa17.45■□□□□ 0.38
TMED3-205ENST00000558562 DLG5Q8TDM6 1919 aa17.45■□□□□ 0.38
TMED3-205ENST00000558562 KLRG2A4D1S0 409 aaPredicted RBP17.44■□□□□ 0.38
TMED3-205ENST00000558562 E9PSI1 815 aa17.44■□□□□ 0.38
TMED3-205ENST00000558562 FZD9O00144 591 aa17.44■□□□□ 0.38
TMED3-205ENST00000558562 PRKAR2BP31323 418 aa17.44■□□□□ 0.38
TMED3-205ENST00000558562 IARSP41252 1262 aaKnown RBP17.44■□□□□ 0.38
TMED3-205ENST00000558562 FMR1Q06787 632 aaKnown RBP eCLIP17.44■□□□□ 0.38
TMED3-205ENST00000558562 DUSP27Q5VZP5 1158 aa17.44■□□□□ 0.38
TMED3-205ENST00000558562 CLEC4GQ6UXB4 293 aa17.44■□□□□ 0.38
TMED3-205ENST00000558562 RTKN2Q8IZC4 609 aa17.44■□□□□ 0.38
TMED3-205ENST00000558562 NIP7Q9Y221 180 aaKnown RBP eCLIP17.44■□□□□ 0.38
TMED3-205ENST00000558562 ZNF652Q9Y2D9 606 aa17.44■□□□□ 0.38
TMED3-205ENST00000558562 TMPOP42166 694 aaKnown RBP17.43■□□□□ 0.38
TMED3-205ENST00000558562 MAP2K1Q02750 393 aaPredicted RBP17.43■□□□□ 0.38
TMED3-205ENST00000558562 GRM1Q13255 1194 aa17.43■□□□□ 0.38
TMED3-205ENST00000558562 TPTE2Q6XPS3 522 aa17.43■□□□□ 0.38
TMED3-205ENST00000558562 PHACTR3Q96KR7 559 aa17.43■□□□□ 0.38
TMED3-205ENST00000558562 RCAN3Q9UKA8 241 aa17.43■□□□□ 0.38
TMED3-205ENST00000558562 CEMIPQ8WUJ3 1361 aa17.42■□□□□ 0.38
TMED3-205ENST00000558562 PAXIP1Q6ZW49 1069 aaPredicted RBP17.42■□□□□ 0.38
TMED3-205ENST00000558562 WDR63Q8IWG1 891 aa17.42■□□□□ 0.38
TMED3-205ENST00000558562 GPC2Q8N158 579 aa17.42■□□□□ 0.38
TMED3-205ENST00000558562 DDX21Q9NR30 783 aaKnown RBP eCLIP17.42■□□□□ 0.38
TMED3-205ENST00000558562 GJA3Q9Y6H8 435 aa17.42■□□□□ 0.38
TMED3-205ENST00000558562 IRX6P78412 446 aaPredicted RBP17.41■□□□□ 0.38
TMED3-205ENST00000558562 TRMT2AQ8IZ69 625 aaKnown RBP17.41■□□□□ 0.38
TMED3-205ENST00000558562 CCDC85CA6NKD9 419 aa17.4■□□□□ 0.38
TMED3-205ENST00000558562 NBPF26B4DH59 902 aa17.4■□□□□ 0.38
TMED3-205ENST00000558562 HLFQ16534 295 aa17.4■□□□□ 0.38
TMED3-205ENST00000558562 NBPF10Q6P3W6 841 aaKnown RBP17.4■□□□□ 0.38
TMED3-205ENST00000558562 NBPF15Q8N660 670 aa17.4■□□□□ 0.38
TMED3-205ENST00000558562 COL4A5P29400 1685 aa17.39■□□□□ 0.37
TMED3-205ENST00000558562 SNRPA1P09661 255 aaKnown RBP17.39■□□□□ 0.37
TMED3-205ENST00000558562 GTF2E1P29083 439 aaPredicted RBP17.39■□□□□ 0.37
TMED3-205ENST00000558562 ALDH1B1P30837 517 aa17.39■□□□□ 0.37
TMED3-205ENST00000558562 CYP4F22Q6NT55 531 aa17.39■□□□□ 0.37
TMED3-205ENST00000558562 JDP2Q8WYK2 163 aa17.39■□□□□ 0.37
TMED3-205ENST00000558562 CAPNS2Q96L46 248 aa17.39■□□□□ 0.37
TMED3-205ENST00000558562 SPINK5Q9NQ38 1064 aaPredicted RBP17.39■□□□□ 0.37
TMED3-205ENST00000558562 TSKSQ9UJT2 592 aa17.39■□□□□ 0.37
TMED3-205ENST00000558562 LTBP1Q14766 1721 aa17.38■□□□□ 0.37
TMED3-205ENST00000558562 EPS15P42566 896 aa17.38■□□□□ 0.37
TMED3-205ENST00000558562 RIPK4P57078 832 aa17.38■□□□□ 0.37
TMED3-205ENST00000558562 NFE2L2Q16236 605 aa17.38■□□□□ 0.37
TMED3-205ENST00000558562 MCM10Q7L590 875 aa17.38■□□□□ 0.37
TMED3-205ENST00000558562 SLC51AQ86UW1 340 aa17.38■□□□□ 0.37
TMED3-205ENST00000558562 TRAF5O00463 557 aa17.37■□□□□ 0.37
TMED3-205ENST00000558562 LMOD1P29536 600 aaPredicted RBP17.37■□□□□ 0.37
TMED3-205ENST00000558562 RRP1P56182 461 aaKnown RBP17.37■□□□□ 0.37
TMED3-205ENST00000558562 EIF6P56537 245 aaKnown RBP17.37■□□□□ 0.37
TMED3-205ENST00000558562 ERICH6BQ5W0A0 696 aa17.37■□□□□ 0.37
TMED3-205ENST00000558562 NUTM1Q86Y26 1132 aa17.37■□□□□ 0.37
TMED3-205ENST00000558562 GPR101Q96P66 508 aaPredicted RBP17.37■□□□□ 0.37
TMED3-205ENST00000558562 BEGAINQ9BUH8 593 aa17.37■□□□□ 0.37
TMED3-205ENST00000558562 SNED1Q8TER0 1413 aa17.37■□□□□ 0.37
TMED3-205ENST00000558562 SCNN1DP51172 638 aa17.36■□□□□ 0.37
TMED3-205ENST00000558562 MLLT1Q03111 559 aaPredicted RBP17.36■□□□□ 0.37
TMED3-205ENST00000558562 PSMD1Q99460 953 aa17.36■□□□□ 0.37
TMED3-205ENST00000558562 TRIM35Q9UPQ4 493 aa17.36■□□□□ 0.37
TMED3-205ENST00000558562 ABCC12Q96J65 1359 aa17.36■□□□□ 0.37
TMED3-205ENST00000558562 TCERG1O14776 1098 aaKnown RBP17.35■□□□□ 0.37
TMED3-205ENST00000558562 DCTN1Q14203 1278 aa17.35■□□□□ 0.37
TMED3-205ENST00000558562 CST9Q5W186 159 aa17.35■□□□□ 0.37
TMED3-205ENST00000558562 AOC2O75106 756 aa17.34■□□□□ 0.37
TMED3-205ENST00000558562 ECE1P42892 770 aa17.34■□□□□ 0.37
TMED3-205ENST00000558562 IL16Q14005 1332 aa17.34■□□□□ 0.37
TMED3-205ENST00000558562 LARGE2Q8N3Y3 721 aa17.34■□□□□ 0.37
TMED3-205ENST00000558562 RTF1Q92541 710 aaKnown RBP17.34■□□□□ 0.37
TMED3-205ENST00000558562 THSD7BQ9C0I4 1608 aa17.34■□□□□ 0.37
TMED3-205ENST00000558562 MYH16Q9H6N6 1097 aa17.34■□□□□ 0.37
TMED3-205ENST00000558562 LMOD3Q0VAK6 560 aa17.33■□□□□ 0.36
TMED3-205ENST00000558562 CRY2Q49AN0 593 aa17.33■□□□□ 0.36
TMED3-205ENST00000558562 RPGRQ92834 1020 aaKnown RBP17.32■□□□□ 0.36
TMED3-205ENST00000558562 CFAP44Q96MT7 982 aa17.32■□□□□ 0.36
TMED3-205ENST00000558562 MIS18AQ9NYP9 233 aa17.32■□□□□ 0.36
TMED3-205ENST00000558562 TLL2Q9Y6L7 1015 aa17.32■□□□□ 0.36
TMED3-205ENST00000558562 TRPM7Q96QT4 1865 aa17.32■□□□□ 0.36
TMED3-205ENST00000558562 RGL2O15211 777 aa17.31■□□□□ 0.36
TMED3-205ENST00000558562 GPTP24298 496 aa17.31■□□□□ 0.36
TMED3-205ENST00000558562 CC2D2BQ6DHV5 1058 aa17.31■□□□□ 0.36
TMED3-205ENST00000558562 USP50Q70EL3 339 aaPredicted RBP17.31■□□□□ 0.36
TMED3-205ENST00000558562 RGS19P49795 217 aa17.3■□□□□ 0.36
TMED3-205ENST00000558562 CALD1Q05682 793 aaKnown RBP17.3■□□□□ 0.36
TMED3-205ENST00000558562 NYXQ9GZU5 481 aa17.3■□□□□ 0.36
TMED3-205ENST00000558562 PPEF1O14829 653 aaPredicted RBP17.29■□□□□ 0.36
TMED3-205ENST00000558562 NIM1KQ8IY84 436 aa17.29■□□□□ 0.36
TMED3-205ENST00000558562 NUP98P52948 1817 aa17.28■□□□□ 0.36
TMED3-205ENST00000558562 FANCIQ9NVI1 1328 aa17.28■□□□□ 0.36
TMED3-205ENST00000558562 PPIP5K2O43314 1243 aa17.28■□□□□ 0.36
TMED3-205ENST00000558562 CELF2O95319 508 aaKnown RBP17.28■□□□□ 0.36
TMED3-205ENST00000558562 HOXA10P31260 410 aaPredicted RBP17.28■□□□□ 0.36
TMED3-205ENST00000558562 MAP2K2P36507 400 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms