RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 NUTM1Q86Y26 1132 aa22.18■■□□□ 1.14
TPM1-214ENST00000558544 PXDNLA1KZ92 1463 aa22.18■■□□□ 1.14
TPM1-214ENST00000558544 GTF2E1P29083 439 aaPredicted RBP22.17■■□□□ 1.14
TPM1-214ENST00000558544 ST5P78524 1137 aa22.17■■□□□ 1.14
TPM1-214ENST00000558544 TRIM28Q13263 835 aaKnown RBP22.17■■□□□ 1.14
TPM1-214ENST00000558544 CWF19L2Q2TBE0 894 aaKnown RBP22.17■■□□□ 1.14
TPM1-214ENST00000558544 SLC4A10Q6U841 1118 aa22.17■■□□□ 1.14
TPM1-214ENST00000558544 FRAT1Q92837 279 aaPredicted RBP22.17■■□□□ 1.14
TPM1-214ENST00000558544 UTP14AQ9BVJ6 771 aaKnown RBP22.17■■□□□ 1.14
TPM1-214ENST00000558544 RCAN3Q9UKA8 241 aa22.17■■□□□ 1.14
TPM1-214ENST00000558544 CACNA1SQ13698 1873 aa22.17■■□□□ 1.14
TPM1-214ENST00000558544 ABCC12Q96J65 1359 aa22.17■■□□□ 1.14
TPM1-214ENST00000558544 BRCA1P38398 1863 aaKnown RBP22.16■■□□□ 1.14
TPM1-214ENST00000558544 CCDC191Q8NCU4 936 aa22.16■■□□□ 1.14
TPM1-214ENST00000558544 CWC25Q9NXE8 425 aaPredicted RBP22.16■■□□□ 1.14
TPM1-214ENST00000558544 MYH3P11055 1940 aa22.15■■□□□ 1.14
TPM1-214ENST00000558544 NEURL1BA8MQ27 555 aa22.15■■□□□ 1.14
TPM1-214ENST00000558544 ERFEQ4G0M1 354 aa22.15■■□□□ 1.14
TPM1-214ENST00000558544 BEND3Q5T5X7 828 aa22.15■■□□□ 1.14
TPM1-214ENST00000558544 TRMT112Q9UI30 125 aaKnown RBP22.15■■□□□ 1.14
TPM1-214ENST00000558544 CD2APQ9Y5K6 639 aa22.15■■□□□ 1.14
TPM1-214ENST00000558544 NLGN2Q8NFZ4 835 aa22.14■■□□□ 1.14
TPM1-214ENST00000558544 LINS1Q8NG48 757 aa22.14■■□□□ 1.14
TPM1-214ENST00000558544 SYT17Q9BSW7 474 aa22.14■■□□□ 1.14
TPM1-214ENST00000558544 API5Q9BZZ5 524 aaKnown RBP22.14■■□□□ 1.14
TPM1-214ENST00000558544 RNF123Q5XPI4 1314 aa22.14■■□□□ 1.13
TPM1-214ENST00000558544 ARHGAP45Q92619 1136 aa22.13■■□□□ 1.13
TPM1-214ENST00000558544 IPO8O15397 1037 aaKnown RBP22.12■■□□□ 1.13
TPM1-214ENST00000558544 RTL5Q5HYW3 569 aaPredicted RBP22.12■■□□□ 1.13
TPM1-214ENST00000558544 SYNE4Q8N205 404 aa22.12■■□□□ 1.13
TPM1-214ENST00000558544 FAM89AQ96GI7 184 aa22.12■■□□□ 1.13
TPM1-214ENST00000558544 TNNQ9UQP3 1299 aa22.12■■□□□ 1.13
TPM1-214ENST00000558544 SH3TC1Q8TE82 1336 aa22.12■■□□□ 1.13
TPM1-214ENST00000558544 TRIM27P14373 513 aa22.12■■□□□ 1.13
TPM1-214ENST00000558544 ZKSCAN2Q63HK3 967 aa22.12■■□□□ 1.13
TPM1-214ENST00000558544 ATF7IPQ6VMQ6 1270 aa22.12■■□□□ 1.13
TPM1-214ENST00000558544 BRIP1Q9BX63 1249 aa22.12■■□□□ 1.13
TPM1-214ENST00000558544 SRCIN1Q9C0H9 1055 aa22.12■■□□□ 1.13
TPM1-214ENST00000558544 RIC1Q4ADV7 1423 aa22.11■■□□□ 1.13
TPM1-214ENST00000558544 GCKRQ14397 625 aa22.11■■□□□ 1.13
TPM1-214ENST00000558544 ZBTB38Q8NAP3 1195 aaPredicted RBP22.11■■□□□ 1.13
TPM1-214ENST00000558544 JARID2Q92833 1246 aaPredicted RBP22.11■■□□□ 1.13
TPM1-214ENST00000558544 GOLGB1Q14789 3259 aaKnown RBP22.1■■□□□ 1.13
TPM1-214ENST00000558544 ABCC4O15439 1325 aa22.09■■□□□ 1.13
TPM1-214ENST00000558544 ALDH1L1O75891 902 aa22.09■■□□□ 1.13
TPM1-214ENST00000558544 PCCAP05165 728 aaPredicted RBP22.09■■□□□ 1.13
TPM1-214ENST00000558544 HCLS1P14317 486 aaPredicted RBP22.09■■□□□ 1.13
TPM1-214ENST00000558544 CHRNA5P30532 468 aa22.09■■□□□ 1.13
TPM1-214ENST00000558544 PDE6BP35913 854 aa22.09■■□□□ 1.13
TPM1-214ENST00000558544 TGFB2P61812 414 aa22.09■■□□□ 1.13
TPM1-214ENST00000558544 CLUAP1Q96AJ1 413 aa22.09■■□□□ 1.13
TPM1-214ENST00000558544 A0A0G2JLW4 131 aa22.08■■□□□ 1.12
TPM1-214ENST00000558544 DPEP1P16444 411 aa22.08■■□□□ 1.12
TPM1-214ENST00000558544 IRS4O14654 1257 aaPredicted RBP22.07■■□□□ 1.12
TPM1-214ENST00000558544 TAF1P21675 1872 aa22.07■■□□□ 1.12
TPM1-214ENST00000558544 SLC10A5Q5PT55 438 aa22.07■■□□□ 1.12
TPM1-214ENST00000558544 UBE3BQ7Z3V4 1068 aa22.07■■□□□ 1.12
TPM1-214ENST00000558544 C2CD5Q86YS7 1000 aa22.07■■□□□ 1.12
TPM1-214ENST00000558544 CCT4P50991 539 aaKnown RBP22.06■■□□□ 1.12
TPM1-214ENST00000558544 C3orf67Q6ZVT6 689 aa22.06■■□□□ 1.12
TPM1-214ENST00000558544 CDHR2Q9BYE9 1310 aa22.06■■□□□ 1.12
TPM1-214ENST00000558544 H0YIN7 160 aa22.05■■□□□ 1.12
TPM1-214ENST00000558544 H7C1W4 665 aa22.05■■□□□ 1.12
TPM1-214ENST00000558544 PLIN1O60240 522 aa22.05■■□□□ 1.12
TPM1-214ENST00000558544 C9orf78Q9NZ63 289 aaPredicted RBP22.05■■□□□ 1.12
TPM1-214ENST00000558544 WWC3Q9ULE0 1092 aa22.05■■□□□ 1.12
TPM1-214ENST00000558544 ARFGEF1Q9Y6D6 1849 aa22.05■■□□□ 1.12
TPM1-214ENST00000558544 GRM8O00222 908 aa22.04■■□□□ 1.12
TPM1-214ENST00000558544 FTSJ3Q8IY81 847 aaKnown RBP22.04■■□□□ 1.12
TPM1-214ENST00000558544 NLRP3Q96P20 1036 aa22.04■■□□□ 1.12
TPM1-214ENST00000558544 KLRG2A4D1S0 409 aaPredicted RBP22.03■■□□□ 1.12
TPM1-214ENST00000558544 KCNA3P22001 575 aa22.03■■□□□ 1.12
TPM1-214ENST00000558544 CASP7P55210 303 aa22.03■■□□□ 1.12
TPM1-214ENST00000558544 DZIP1LQ8IYY4 767 aaKnown RBP22.03■■□□□ 1.12
TPM1-214ENST00000558544 PDZRN3Q9UPQ7 1066 aa22.03■■□□□ 1.12
TPM1-214ENST00000558544 SLX4Q8IY92 1834 aa22.03■■□□□ 1.12
TPM1-214ENST00000558544 SPEF2Q9C093 1822 aa22.03■■□□□ 1.12
TPM1-214ENST00000558544 SRGNP10124 158 aa22.02■■□□□ 1.12
TPM1-214ENST00000558544 INTS3Q68E01 1043 aaKnown RBP22.02■■□□□ 1.12
TPM1-214ENST00000558544 TMEM57Q8N5G2 664 aa22.02■■□□□ 1.12
TPM1-214ENST00000558544 RLBP1P12271 317 aa22.01■■□□□ 1.11
TPM1-214ENST00000558544 CRY2Q49AN0 593 aa22.01■■□□□ 1.11
TPM1-214ENST00000558544 ZNF622Q969S3 477 aaKnown RBP eCLIP22.01■■□□□ 1.116e-7■■□□□ 13.8
TPM1-214ENST00000558544 PDE8AO60658 829 aa22■■□□□ 1.11
TPM1-214ENST00000558544 NBPF7P0C2Y1 421 aaPredicted RBP22■■□□□ 1.11
TPM1-214ENST00000558544 HSP90B1P14625 803 aaKnown RBP22■■□□□ 1.11
TPM1-214ENST00000558544 GOLGA6L2Q8N9W4 650 aaPredicted RBP22■■□□□ 1.11
TPM1-214ENST00000558544 PANK1Q8TE04 598 aa22■■□□□ 1.11
TPM1-214ENST00000558544 RPGRQ92834 1020 aaKnown RBP22■■□□□ 1.11
TPM1-214ENST00000558544 MASTLQ96GX5 879 aa22■■□□□ 1.11
TPM1-214ENST00000558544 NPR1P16066 1061 aa21.99■■□□□ 1.11
TPM1-214ENST00000558544 USP44Q9H0E7 712 aa21.99■■□□□ 1.11
TPM1-214ENST00000558544 PIM2Q9P1W9 311 aa21.99■■□□□ 1.11
TPM1-214ENST00000558544 UTYO14607 1347 aa21.99■■□□□ 1.11
TPM1-214ENST00000558544 COL4A1P02462 1669 aa21.99■■□□□ 1.11
TPM1-214ENST00000558544 STYK1Q6J9G0 422 aa21.99■■□□□ 1.11
TPM1-214ENST00000558544 PELP1Q8IZL8 1130 aaKnown RBP21.99■■□□□ 1.11
TPM1-214ENST00000558544 MS4A1P11836 297 aa21.98■■□□□ 1.11
TPM1-214ENST00000558544 CTSWP56202 376 aa21.98■■□□□ 1.11
TPM1-214ENST00000558544 SUCLG2Q96I99 432 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 290.9 ms