RNA–Protein interactions for RNA: ENST00000558445.5

TRPM1-207, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRPM1, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-207ENST00000558445 CCDC26Q8TAB7 109 aa11.62□□□□□ -0.55
TRPM1-207ENST00000558445 PHLPP2Q6ZVD8 1323 aa11.61□□□□□ -0.55
TRPM1-207ENST00000558445 TEX14Q8IWB6 1497 aa11.61□□□□□ -0.55
TRPM1-207ENST00000558445 ICA1Q05084 483 aa11.61□□□□□ -0.55
TRPM1-207ENST00000558445 STX1AQ16623 288 aa11.61□□□□□ -0.55
TRPM1-207ENST00000558445 SCAND2PQ9GZW5 306 aaPredicted RBP11.61□□□□□ -0.55
TRPM1-207ENST00000558445 BATF3Q9NR55 127 aa11.61□□□□□ -0.55
TRPM1-207ENST00000558445 MRFAP1Q9Y605 127 aa11.61□□□□□ -0.55
TRPM1-207ENST00000558445 CDKL5O76039 1030 aa11.61□□□□□ -0.55
TRPM1-207ENST00000558445 RANBP1P43487 201 aa11.61□□□□□ -0.55
TRPM1-207ENST00000558445 FILIP1LQ4L180 1135 aa11.61□□□□□ -0.55
TRPM1-207ENST00000558445 NYAP1Q6ZVC0 841 aa11.61□□□□□ -0.55
TRPM1-207ENST00000558445 RNF168Q8IYW5 571 aaPredicted RBP11.61□□□□□ -0.55
TRPM1-207ENST00000558445 SPATA32Q96LK8 384 aa11.61□□□□□ -0.55
TRPM1-207ENST00000558445 ZSWIM4Q9H7M6 989 aa11.61□□□□□ -0.55
TRPM1-207ENST00000558445 INCENPQ9NQS7 918 aa11.61□□□□□ -0.55
TRPM1-207ENST00000558445 CARMIL1Q5VZK9 1371 aa11.61□□□□□ -0.55
TRPM1-207ENST00000558445 PTPRKQ15262 1439 aa11.61□□□□□ -0.55
TRPM1-207ENST00000558445 FHOD3Q2V2M9 1422 aa11.61□□□□□ -0.55
TRPM1-207ENST00000558445 NDUFAB1O14561 156 aa11.61□□□□□ -0.55
TRPM1-207ENST00000558445 PER1O15534 1290 aaPredicted RBP11.61□□□□□ -0.55
TRPM1-207ENST00000558445 ATP2B2Q01814 1243 aa11.61□□□□□ -0.55
TRPM1-207ENST00000558445 TDRD7Q8NHU6 1098 aaKnown RBP11.61□□□□□ -0.55
TRPM1-207ENST00000558445 L2HGDHQ9H9P8 463 aa11.61□□□□□ -0.55
TRPM1-207ENST00000558445 A1CFQ9NQ94 594 aaKnown RBP11.61□□□□□ -0.55
TRPM1-207ENST00000558445 NOB1Q9ULX3 412 aaKnown RBP11.61□□□□□ -0.55
TRPM1-207ENST00000558445 POLR1AO95602 1720 aaPredicted RBP11.61□□□□□ -0.55
TRPM1-207ENST00000558445 EPRSP07814 1512 aaKnown RBP11.6□□□□□ -0.55
TRPM1-207ENST00000558445 KIF4AO95239 1232 aa11.6□□□□□ -0.55
TRPM1-207ENST00000558445 TBC1D8O95759 1140 aa11.6□□□□□ -0.55
TRPM1-207ENST00000558445 F13A1P00488 732 aa11.6□□□□□ -0.55
TRPM1-207ENST00000558445 BAG1Q99933 345 aaPredicted RBP11.6□□□□□ -0.55
TRPM1-207ENST00000558445 IMPACTQ9P2X3 320 aa11.6□□□□□ -0.55
TRPM1-207ENST00000558445 TRIM27P14373 513 aa11.6□□□□□ -0.55
TRPM1-207ENST00000558445 USP16Q9Y5T5 823 aa11.6□□□□□ -0.55
TRPM1-207ENST00000558445 CBFA2T2O43439 604 aa11.6□□□□□ -0.55
TRPM1-207ENST00000558445 TMEM87AQ8NBN3 555 aa11.6□□□□□ -0.55
TRPM1-207ENST00000558445 BCAS4Q8TDM0 211 aa11.6□□□□□ -0.55
TRPM1-207ENST00000558445 HOOK1Q9UJC3 728 aaKnown RBP11.6□□□□□ -0.55
TRPM1-207ENST00000558445 AP1G2O75843 785 aa11.6□□□□□ -0.55
TRPM1-207ENST00000558445 MYBL2P10244 700 aa11.6□□□□□ -0.55
TRPM1-207ENST00000558445 TXLNAP40222 546 aa11.6□□□□□ -0.55
TRPM1-207ENST00000558445 C11orf91Q3C1V1 193 aa11.6□□□□□ -0.55
TRPM1-207ENST00000558445 CCDC121Q6ZUS5 278 aa11.6□□□□□ -0.55
TRPM1-207ENST00000558445 KIF9Q9HAQ2 790 aa11.6□□□□□ -0.55
TRPM1-207ENST00000558445 HECW1Q76N89 1606 aa11.6□□□□□ -0.55
TRPM1-207ENST00000558445 MTA1Q13330 715 aa11.59□□□□□ -0.55
TRPM1-207ENST00000558445 SF3A1Q15459 793 aaKnown RBP11.59□□□□□ -0.55
TRPM1-207ENST00000558445 FAM114A1Q8IWE2 563 aa11.59□□□□□ -0.55
TRPM1-207ENST00000558445 CCDC12Q8WUD4 166 aaPredicted RBP11.59□□□□□ -0.55
TRPM1-207ENST00000558445 PPP1R13BQ96KQ4 1090 aa11.59□□□□□ -0.55
TRPM1-207ENST00000558445 PARD6BQ9BYG5 372 aa11.59□□□□□ -0.55
TRPM1-207ENST00000558445 CASKIN1Q8WXD9 1431 aa11.59□□□□□ -0.55
TRPM1-207ENST00000558445 EPB41L2O43491 1005 aaKnown RBP11.59□□□□□ -0.55
TRPM1-207ENST00000558445 U2AF1L5P0DN76 240 aaPredicted RBP11.59□□□□□ -0.55
TRPM1-207ENST00000558445 U2AF1Q01081 240 aaKnown RBP eCLIP11.59□□□□□ -0.55
TRPM1-207ENST00000558445 KIF4BQ2VIQ3 1234 aa11.59□□□□□ -0.55
TRPM1-207ENST00000558445 CPLX2Q6PUV4 134 aaKnown RBP11.59□□□□□ -0.55
TRPM1-207ENST00000558445 ZBTB10Q96DT7 871 aa11.59□□□□□ -0.55
TRPM1-207ENST00000558445 DACT1Q9NYF0 836 aa11.59□□□□□ -0.55
TRPM1-207ENST00000558445 RALGAPBQ86X10 1494 aa11.59□□□□□ -0.55
TRPM1-207ENST00000558445 USP27XA6NNY8 438 aa11.59□□□□□ -0.55
TRPM1-207ENST00000558445 PPFIA2O75334 1257 aa11.59□□□□□ -0.55
TRPM1-207ENST00000558445 GPTP24298 496 aa11.59□□□□□ -0.55
TRPM1-207ENST00000558445 TRIM74Q86UV6 250 aa11.59□□□□□ -0.55
TRPM1-207ENST00000558445 TRIM73Q86UV7 250 aa11.59□□□□□ -0.55
TRPM1-207ENST00000558445 TCP11Q8WWU5 503 aa11.59□□□□□ -0.55
TRPM1-207ENST00000558445 SWAP70Q9UH65 585 aa11.59□□□□□ -0.55
TRPM1-207ENST00000558445 BUB1BO60566 1050 aaPredicted RBP11.58□□□□□ -0.56
TRPM1-207ENST00000558445 TADA3O75528 432 aa11.58□□□□□ -0.56
TRPM1-207ENST00000558445 RRP12Q5JTH9 1297 aaKnown RBP11.58□□□□□ -0.56
TRPM1-207ENST00000558445 TTC22Q5TAA0 569 aa11.58□□□□□ -0.56
TRPM1-207ENST00000558445 FBXW7Q969H0 707 aa11.58□□□□□ -0.56
TRPM1-207ENST00000558445 TEX13AQ9BXU3 409 aaPredicted RBP11.58□□□□□ -0.56
TRPM1-207ENST00000558445 CCDC141Q6ZP82 1450 aa11.58□□□□□ -0.56
TRPM1-207ENST00000558445 SSBP05455 408 aaKnown RBP eCLIP11.58□□□□□ -0.56
TRPM1-207ENST00000558445 RPSAP08865 295 aaKnown RBP11.58□□□□□ -0.56
TRPM1-207ENST00000558445 CHMP4BP1P59074 171 aa11.58□□□□□ -0.56
TRPM1-207ENST00000558445 ACRBPQ8NEB7 543 aa11.58□□□□□ -0.56
TRPM1-207ENST00000558445 TRIM4Q9C037 500 aa11.58□□□□□ -0.56
TRPM1-207ENST00000558445 RPGRIP1LQ68CZ1 1315 aa11.58□□□□□ -0.56
TRPM1-207ENST00000558445 KIF3BO15066 747 aa11.58□□□□□ -0.56
TRPM1-207ENST00000558445 PLA2G4DQ86XP0 818 aa11.58□□□□□ -0.56
TRPM1-207ENST00000558445 UHRF1BP1LA0JNW5 1464 aa11.58□□□□□ -0.56
TRPM1-207ENST00000558445 HHATQ5VTY9 493 aa11.57□□□□□ -0.56
TRPM1-207ENST00000558445 CAPRIN2Q6IMN6 1127 aaKnown RBP11.57□□□□□ -0.56
TRPM1-207ENST00000558445 LRRC31Q6UY01 552 aa11.57□□□□□ -0.56
TRPM1-207ENST00000558445 PDILTQ8N807 584 aa11.57□□□□□ -0.56
TRPM1-207ENST00000558445 OSBPL9Q96SU4 736 aa11.57□□□□□ -0.56
TRPM1-207ENST00000558445 ENO4A6NNW6 628 aa11.57□□□□□ -0.56
TRPM1-207ENST00000558445 EXOSC9Q06265 439 aaKnown RBP11.57□□□□□ -0.56
TRPM1-207ENST00000558445 REXO1L1PQ8IX06 675 aa11.57□□□□□ -0.56
TRPM1-207ENST00000558445 RILPL2Q969X0 211 aa11.57□□□□□ -0.56
TRPM1-207ENST00000558445 THOC1Q96FV9 657 aaKnown RBP11.57□□□□□ -0.56
TRPM1-207ENST00000558445 SDF4Q9BRK5 362 aa11.57□□□□□ -0.56
TRPM1-207ENST00000558445 RMI1Q9H9A7 625 aa11.57□□□□□ -0.56
TRPM1-207ENST00000558445 WDHD1O75717 1129 aaPredicted RBP11.57□□□□□ -0.56
TRPM1-207ENST00000558445 SYTL4Q96C24 671 aaPredicted RBP11.57□□□□□ -0.56
TRPM1-207ENST00000558445 IQCGQ9H095 443 aaKnown RBP11.57□□□□□ -0.56
TRPM1-207ENST00000558445 KIF5CO60282 957 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms