RNA–Protein interactions for RNA: ENST00000558373.5

CTDSPL2-202, Transcript of CTD small phosphatase like 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSPL2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-202ENST00000558373 SERTM1A2A2V5 107 aa2.06□□□□□ -2.08
CTDSPL2-202ENST00000558373 MZF1P28698 734 aaPredicted RBP2.06□□□□□ -2.08
CTDSPL2-202ENST00000558373 AAMPQ13685 434 aa2.06□□□□□ -2.08
CTDSPL2-202ENST00000558373 NBPF1Q3BBV0 1214 aa2.06□□□□□ -2.08
CTDSPL2-202ENST00000558373 CCDC116Q8IYX3 515 aa2.06□□□□□ -2.08
CTDSPL2-202ENST00000558373 GJD3Q8N144 294 aa2.06□□□□□ -2.08
CTDSPL2-202ENST00000558373 SLC43A3Q8NBI5 491 aa2.06□□□□□ -2.08
CTDSPL2-202ENST00000558373 SRCIN1Q9C0H9 1055 aa2.06□□□□□ -2.08
CTDSPL2-202ENST00000558373 ZDHHC3Q9NYG2 299 aa2.06□□□□□ -2.08
CTDSPL2-202ENST00000558373 SPG7Q9UQ90 795 aa2.06□□□□□ -2.08
CTDSPL2-202ENST00000558373 PKD1P98161 4303 aa2.06□□□□□ -2.08
CTDSPL2-202ENST00000558373 SCAMP3O14828 347 aaKnown RBP2.06□□□□□ -2.08
CTDSPL2-202ENST00000558373 PPP1R12BO60237 982 aaPredicted RBP2.06□□□□□ -2.08
CTDSPL2-202ENST00000558373 ADAM23O75077 832 aa2.06□□□□□ -2.08
CTDSPL2-202ENST00000558373 PRPF40AO75400 957 aaKnown RBP2.06□□□□□ -2.08
CTDSPL2-202ENST00000558373 ZC3H6P61129 1189 aaKnown RBP2.06□□□□□ -2.08
CTDSPL2-202ENST00000558373 SH3BP2P78314 561 aa2.06□□□□□ -2.08
CTDSPL2-202ENST00000558373 CRTC2Q53ET0 693 aaPredicted RBP2.06□□□□□ -2.08
CTDSPL2-202ENST00000558373 GMCL1Q96IK5 515 aa2.06□□□□□ -2.08
CTDSPL2-202ENST00000558373 ZFP42Q96MM3 310 aa2.06□□□□□ -2.08
CTDSPL2-202ENST00000558373 CARD14Q9BXL6 1004 aa2.06□□□□□ -2.08
CTDSPL2-202ENST00000558373 STIM2Q9P246 746 aa2.06□□□□□ -2.08
CTDSPL2-202ENST00000558373 MYO15AQ9UKN7 3530 aa2.06□□□□□ -2.08
CTDSPL2-202ENST00000558373 H3BRB1 525 aa2.05□□□□□ -2.08
CTDSPL2-202ENST00000558373 PPFIA3O75145 1194 aa2.05□□□□□ -2.08
CTDSPL2-202ENST00000558373 BMP1P13497 986 aa2.05□□□□□ -2.08
CTDSPL2-202ENST00000558373 RTN1Q16799 776 aa2.05□□□□□ -2.08
CTDSPL2-202ENST00000558373 CACTIN-AS1Q8N1I8 211 aa2.05□□□□□ -2.08
CTDSPL2-202ENST00000558373 GTF3C2Q8WUA4 911 aaPredicted RBP2.05□□□□□ -2.08
CTDSPL2-202ENST00000558373 NIFKQ9BYG3 293 aaKnown RBP2.05□□□□□ -2.08
CTDSPL2-202ENST00000558373 TUT1Q9H6E5 874 aaKnown RBP2.05□□□□□ -2.08
CTDSPL2-202ENST00000558373 ADAMTS8Q9UP79 889 aa2.05□□□□□ -2.08
CTDSPL2-202ENST00000558373 TRAK1Q9UPV9 953 aa2.05□□□□□ -2.08
CTDSPL2-202ENST00000558373 DNMT3AQ9Y6K1 912 aaPredicted RBP2.05□□□□□ -2.08
CTDSPL2-202ENST00000558373 TTC24A2A3L6 582 aaPredicted RBP2.05□□□□□ -2.08
CTDSPL2-202ENST00000558373 ANKRD33BA6NCL7 494 aa2.05□□□□□ -2.08
CTDSPL2-202ENST00000558373 A6NJY4 79 aa2.05□□□□□ -2.08
CTDSPL2-202ENST00000558373 PIK3CDO00329 1044 aa2.05□□□□□ -2.08
CTDSPL2-202ENST00000558373 ITGB7P26010 798 aa2.05□□□□□ -2.08
CTDSPL2-202ENST00000558373 PWP1Q13610 501 aa2.05□□□□□ -2.08
CTDSPL2-202ENST00000558373 PCSK7Q16549 785 aa2.05□□□□□ -2.08
CTDSPL2-202ENST00000558373 STK32AQ8WU08 396 aa2.05□□□□□ -2.08
CTDSPL2-202ENST00000558373 FOXJ1Q92949 421 aa2.05□□□□□ -2.08
CTDSPL2-202ENST00000558373 SRA1Q9HD15 236 aaKnown RBP2.05□□□□□ -2.08
CTDSPL2-202ENST00000558373 RGS17Q9UGC6 210 aaPredicted RBP2.05□□□□□ -2.08
CTDSPL2-202ENST00000558373 SFI1A8K8P3 1242 aa2.05□□□□□ -2.08
CTDSPL2-202ENST00000558373 PRMT3O60678 531 aa2.05□□□□□ -2.08
CTDSPL2-202ENST00000558373 ADH1CP00326 375 aa2.05□□□□□ -2.08
CTDSPL2-202ENST00000558373 ADH1AP07327 375 aa2.05□□□□□ -2.08
CTDSPL2-202ENST00000558373 TMEM214Q6NUQ4 689 aaKnown RBP2.05□□□□□ -2.08
CTDSPL2-202ENST00000558373 DEPDC4Q8N2C3 294 aa2.05□□□□□ -2.08
CTDSPL2-202ENST00000558373 DCAF11Q8TEB1 546 aa2.05□□□□□ -2.08
CTDSPL2-202ENST00000558373 SCG3Q8WXD2 468 aaKnown RBP2.05□□□□□ -2.08
CTDSPL2-202ENST00000558373 PTGIRP43119 386 aa2.05□□□□□ -2.08
CTDSPL2-202ENST00000558373 TAF7LQ5H9L4 462 aa2.05□□□□□ -2.08
CTDSPL2-202ENST00000558373 COL13A1Q5TAT6 717 aaPredicted RBP2.05□□□□□ -2.08
CTDSPL2-202ENST00000558373 TMEM151AQ8N4L1 468 aa2.05□□□□□ -2.08
CTDSPL2-202ENST00000558373 MRRFQ96E11 262 aaKnown RBP2.05□□□□□ -2.08
CTDSPL2-202ENST00000558373 ERVH48-1M5A8F1 160 aa2.04□□□□□ -2.08
CTDSPL2-202ENST00000558373 TCF3P15923 654 aa2.04□□□□□ -2.08
CTDSPL2-202ENST00000558373 NEUROD1Q13562 356 aa2.04□□□□□ -2.08
CTDSPL2-202ENST00000558373 LINC01559Q495D7 138 aa2.04□□□□□ -2.08
CTDSPL2-202ENST00000558373 INTS6LQ5JSJ4 861 aaKnown RBP2.04□□□□□ -2.08
CTDSPL2-202ENST00000558373 IER5Q5VY09 327 aa2.04□□□□□ -2.08
CTDSPL2-202ENST00000558373 ZDHHC1Q8WTX9 485 aa2.04□□□□□ -2.08
CTDSPL2-202ENST00000558373 ZNF594Q96JF6 807 aaPredicted RBP2.04□□□□□ -2.08
CTDSPL2-202ENST00000558373 FZD6O60353 706 aa2.04□□□□□ -2.08
CTDSPL2-202ENST00000558373 XRCC5P13010 732 aaKnown RBP2.04□□□□□ -2.08
CTDSPL2-202ENST00000558373 YBX3P16989 372 aaKnown RBP eCLIP2.04□□□□□ -2.082e-9■□□□□ 9.6
CTDSPL2-202ENST00000558373 RNF144AP50876 292 aaPredicted RBP2.04□□□□□ -2.08
CTDSPL2-202ENST00000558373 PSMD2Q13200 908 aa2.04□□□□□ -2.08
CTDSPL2-202ENST00000558373 SCARF1Q14162 830 aa2.04□□□□□ -2.08
CTDSPL2-202ENST00000558373 FOXD4L5Q5VV16 416 aaPredicted RBP2.04□□□□□ -2.08
CTDSPL2-202ENST00000558373 MRPL14Q6P1L8 145 aaKnown RBP2.04□□□□□ -2.08
CTDSPL2-202ENST00000558373 DDX54Q8TDD1 881 aaKnown RBP2.04□□□□□ -2.08
CTDSPL2-202ENST00000558373 SREK1Q8WXA9 508 aaKnown RBP2.04□□□□□ -2.08
CTDSPL2-202ENST00000558373 FOXD4L4Q8WXT5 416 aaPredicted RBP2.04□□□□□ -2.08
CTDSPL2-202ENST00000558373 UBXN4Q92575 508 aa2.04□□□□□ -2.08
CTDSPL2-202ENST00000558373 PRIMPOLQ96LW4 560 aa2.04□□□□□ -2.08
CTDSPL2-202ENST00000558373 ESYT1Q9BSJ8 1104 aa2.04□□□□□ -2.08
CTDSPL2-202ENST00000558373 PRDM6Q9NQX0 595 aa2.04□□□□□ -2.08
CTDSPL2-202ENST00000558373 SAMM50Q9Y512 469 aa2.04□□□□□ -2.08
CTDSPL2-202ENST00000558373 GDF11O95390 407 aa2.04□□□□□ -2.08
CTDSPL2-202ENST00000558373 EIF4BP23588 611 aaKnown RBP2.04□□□□□ -2.08
CTDSPL2-202ENST00000558373 LAMC2Q13753 1193 aa2.04□□□□□ -2.08
CTDSPL2-202ENST00000558373 TLR1Q15399 786 aa2.04□□□□□ -2.08
CTDSPL2-202ENST00000558373 ZNF654Q8IZM8 581 aa2.04□□□□□ -2.08
CTDSPL2-202ENST00000558373 SERBP1Q8NC51 408 aaKnown RBP eCLIP2.04□□□□□ -2.08
CTDSPL2-202ENST00000558373 RHBDD1Q8TEB9 315 aa2.04□□□□□ -2.08
CTDSPL2-202ENST00000558373 RNF34Q969K3 372 aa2.04□□□□□ -2.08
CTDSPL2-202ENST00000558373 TSEN34Q9BSV6 310 aaKnown RBP2.04□□□□□ -2.08
CTDSPL2-202ENST00000558373 ZNF16P17020 682 aaPredicted RBP2.03□□□□□ -2.08
CTDSPL2-202ENST00000558373 ARID5BQ14865 1188 aa2.03□□□□□ -2.08
CTDSPL2-202ENST00000558373 WHAMMQ8TF30 809 aa2.03□□□□□ -2.08
CTDSPL2-202ENST00000558373 GIPC2Q8TF65 315 aa2.03□□□□□ -2.08
CTDSPL2-202ENST00000558373 ZSCAN10Q96SZ4 725 aaPredicted RBP2.03□□□□□ -2.08
CTDSPL2-202ENST00000558373 CABP1Q9NZU7 370 aa2.03□□□□□ -2.08
CTDSPL2-202ENST00000558373 GJA3Q9Y6H8 435 aa2.03□□□□□ -2.08
CTDSPL2-202ENST00000558373 FAM177BA6PVY3 158 aa2.03□□□□□ -2.08
CTDSPL2-202ENST00000558373 BTBD11A6QL63 1104 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms