RNA–Protein interactions for RNA: ENST00000558212.5

TRPM1-206, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 670 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-206ENST00000558212 TRPM3Q9HCF6 1732 aaPredicted RBP9.69□□□□□ -0.86
TRPM1-206ENST00000558212 ANKRD30BQ9BXX2 1392 aa9.68□□□□□ -0.86
TRPM1-206ENST00000558212 SPATA31A1Q5TZJ5 1347 aa9.68□□□□□ -0.86
TRPM1-206ENST00000558212 SENP3-EIF4A1A0A087X0R7 540 aa9.68□□□□□ -0.86
TRPM1-206ENST00000558212 RNF223E7ERA6 249 aa9.68□□□□□ -0.86
TRPM1-206ENST00000558212 BPHLQ86WA6 291 aaPredicted RBP9.68□□□□□ -0.86
TRPM1-206ENST00000558212 UTRNP46939 3433 aa9.68□□□□□ -0.86
TRPM1-206ENST00000558212 CAMTA1Q9Y6Y1 1673 aa9.67□□□□□ -0.86
TRPM1-206ENST00000558212 PIK3C2GO75747 1445 aa9.67□□□□□ -0.86
TRPM1-206ENST00000558212 ATG7O95352 703 aa9.67□□□□□ -0.86
TRPM1-206ENST00000558212 ERFEQ4G0M1 354 aa9.67□□□□□ -0.86
TRPM1-206ENST00000558212 CRYBG1Q9Y4K1 1723 aa9.67□□□□□ -0.86
TRPM1-206ENST00000558212 GPRASP1Q5JY77 1395 aa9.66□□□□□ -0.86
TRPM1-206ENST00000558212 ZBTB7CA1YPR0 619 aa9.66□□□□□ -0.86
TRPM1-206ENST00000558212 SH3BP2P78314 561 aa9.66□□□□□ -0.86
TRPM1-206ENST00000558212 PLA2G2CQ5R387 149 aa9.66□□□□□ -0.86
TRPM1-206ENST00000558212 TMEM132EQ6IEE7 984 aa9.66□□□□□ -0.86
TRPM1-206ENST00000558212 ZBTB33Q86T24 672 aa9.66□□□□□ -0.86
TRPM1-206ENST00000558212 TRMT44Q8IYL2 757 aaKnown RBP9.66□□□□□ -0.86
TRPM1-206ENST00000558212 FOXJ1Q92949 421 aa9.66□□□□□ -0.86
TRPM1-206ENST00000558212 PRDM11Q9NQV5 511 aa9.66□□□□□ -0.86
TRPM1-206ENST00000558212 USTQ9Y2C2 406 aa9.66□□□□□ -0.86
TRPM1-206ENST00000558212 PCDHB9Q9Y5E1 797 aa9.66□□□□□ -0.86
TRPM1-206ENST00000558212 ACIN1Q9UKV3 1341 aaKnown RBP9.65□□□□□ -0.86
TRPM1-206ENST00000558212 USP17L3A6NCW0 530 aa9.65□□□□□ -0.86
TRPM1-206ENST00000558212 USP17L4A6NCW7 530 aa9.65□□□□□ -0.86
TRPM1-206ENST00000558212 USP17L5A8MUK1 530 aa9.65□□□□□ -0.86
TRPM1-206ENST00000558212 PPEF1O14829 653 aaPredicted RBP9.65□□□□□ -0.86
TRPM1-206ENST00000558212 TRAF7Q6Q0C0 670 aa9.65□□□□□ -0.86
TRPM1-206ENST00000558212 USP17L2Q6R6M4 530 aa9.65□□□□□ -0.86
TRPM1-206ENST00000558212 USP17L1Q7RTZ2 530 aa9.65□□□□□ -0.86
TRPM1-206ENST00000558212 RGPD3A6NKT7 1758 aaPredicted RBP9.65□□□□□ -0.87
TRPM1-206ENST00000558212 RGPD4Q7Z3J3 1758 aa9.65□□□□□ -0.87
TRPM1-206ENST00000558212 SPATA31E1Q6ZUB1 1445 aa9.65□□□□□ -0.87
TRPM1-206ENST00000558212 C1QTNF8P60827 252 aa9.64□□□□□ -0.87
TRPM1-206ENST00000558212 PDE3BQ13370 1112 aa9.64□□□□□ -0.87
TRPM1-206ENST00000558212 LINC01559Q495D7 138 aa9.64□□□□□ -0.87
TRPM1-206ENST00000558212 PMFBP1Q8TBY8 1022 aa9.64□□□□□ -0.87
TRPM1-206ENST00000558212 CHD4Q14839 1912 aa9.64□□□□□ -0.87
TRPM1-206ENST00000558212 CEP350Q5VT06 3117 aa9.64□□□□□ -0.87
TRPM1-206ENST00000558212 NRKQ7Z2Y5 1582 aa9.63□□□□□ -0.87
TRPM1-206ENST00000558212 CASZ1Q86V15 1759 aa9.63□□□□□ -0.87
TRPM1-206ENST00000558212 C11orf95C9JLR9 678 aaPredicted RBP9.63□□□□□ -0.87
TRPM1-206ENST00000558212 LZTS3O60299 673 aaPredicted RBP9.63□□□□□ -0.87
TRPM1-206ENST00000558212 SKIP12755 728 aa9.63□□□□□ -0.87
TRPM1-206ENST00000558212 TRIM32Q13049 653 aa9.63□□□□□ -0.87
TRPM1-206ENST00000558212 ELOAQ14241 798 aaKnown RBP9.63□□□□□ -0.87
TRPM1-206ENST00000558212 SLFNL1Q499Z3 407 aa9.63□□□□□ -0.87
TRPM1-206ENST00000558212 EIF3AQ14152 1382 aaKnown RBP9.63□□□□□ -0.87
TRPM1-206ENST00000558212 DHX57Q6P158 1386 aaKnown RBP9.63□□□□□ -0.87
TRPM1-206ENST00000558212 MAGEB6P1A0A0J9YX57 407 aa9.62□□□□□ -0.87
TRPM1-206ENST00000558212 ESPNB1AK53 854 aa9.62□□□□□ -0.87
TRPM1-206ENST00000558212 WNT7BP56706 349 aa9.62□□□□□ -0.87
TRPM1-206ENST00000558212 MAP7D1Q3KQU3 841 aa9.62□□□□□ -0.87
TRPM1-206ENST00000558212 PPP1R18Q6NYC8 613 aa9.62□□□□□ -0.87
TRPM1-206ENST00000558212 RNF135Q8IUD6 432 aa9.62□□□□□ -0.87
TRPM1-206ENST00000558212 PLPP7Q8NBV4 271 aa9.62□□□□□ -0.87
TRPM1-206ENST00000558212 CARD14Q9BXL6 1004 aa9.62□□□□□ -0.87
TRPM1-206ENST00000558212 KIAA0232Q92628 1395 aa9.62□□□□□ -0.87
TRPM1-206ENST00000558212 DLC1Q96QB1 1528 aa9.61□□□□□ -0.87
TRPM1-206ENST00000558212 TMEM88BA6NKF7 163 aa9.61□□□□□ -0.87
TRPM1-206ENST00000558212 GGCXP38435 758 aa9.61□□□□□ -0.87
TRPM1-206ENST00000558212 RPIAP49247 311 aa9.61□□□□□ -0.87
TRPM1-206ENST00000558212 SKOR1P84550 965 aa9.61□□□□□ -0.87
TRPM1-206ENST00000558212 PDE4CQ08493 712 aa9.61□□□□□ -0.87
TRPM1-206ENST00000558212 RGL3Q3MIN7 710 aa9.61□□□□□ -0.87
TRPM1-206ENST00000558212 DZIP3Q86Y13 1208 aaKnown RBP9.61□□□□□ -0.87
TRPM1-206ENST00000558212 PRAM1Q96QH2 718 aa9.61□□□□□ -0.87
TRPM1-206ENST00000558212 VRTNQ9H8Y1 702 aa9.61□□□□□ -0.87
TRPM1-206ENST00000558212 C14orf93Q9H972 538 aaKnown RBP9.61□□□□□ -0.87
TRPM1-206ENST00000558212 STRN4Q9NRL3 753 aa9.61□□□□□ -0.87
TRPM1-206ENST00000558212 SSH2Q76I76 1423 aa9.61□□□□□ -0.87
TRPM1-206ENST00000558212 MYOM1P52179 1685 aa9.61□□□□□ -0.87
TRPM1-206ENST00000558212 PHRF1Q9P1Y6 1649 aaKnown RBP9.6□□□□□ -0.87
TRPM1-206ENST00000558212 FAM196BA6NMK8 535 aa9.6□□□□□ -0.87
TRPM1-206ENST00000558212 NCOA4Q13772 614 aa9.6□□□□□ -0.87
TRPM1-206ENST00000558212 SAFB2Q14151 953 aaKnown RBP eCLIP9.6□□□□□ -0.87
TRPM1-206ENST00000558212 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.6□□□□□ -0.87
TRPM1-206ENST00000558212 CDV3Q9UKY7 258 aaKnown RBP9.6□□□□□ -0.87
TRPM1-206ENST00000558212 TULP4Q9NRJ4 1543 aa9.6□□□□□ -0.87
TRPM1-206ENST00000558212 PARP4Q9UKK3 1724 aaKnown RBP9.59□□□□□ -0.87
TRPM1-206ENST00000558212 PLSCR1O15162 318 aa9.59□□□□□ -0.87
TRPM1-206ENST00000558212 CHRNA2Q15822 529 aa9.59□□□□□ -0.87
TRPM1-206ENST00000558212 TCP11L2Q8N4U5 519 aa9.59□□□□□ -0.87
TRPM1-206ENST00000558212 KCTD17Q8N5Z5 321 aa9.59□□□□□ -0.87
TRPM1-206ENST00000558212 EMID1Q96A84 441 aaPredicted RBP9.59□□□□□ -0.87
TRPM1-206ENST00000558212 SLC10A4Q96EP9 437 aa9.59□□□□□ -0.87
TRPM1-206ENST00000558212 CCDC85AQ96PX6 553 aaPredicted RBP9.59□□□□□ -0.87
TRPM1-206ENST00000558212 POGKQ9P215 609 aa9.59□□□□□ -0.87
TRPM1-206ENST00000558212 USP35Q9P2H5 1018 aa9.59□□□□□ -0.87
TRPM1-206ENST00000558212 ZMIZ1Q9ULJ6 1067 aa9.59□□□□□ -0.87
TRPM1-206ENST00000558212 THRAP3Q9Y2W1 955 aaKnown RBP9.59□□□□□ -0.87
TRPM1-206ENST00000558212 MAP4K5Q9Y4K4 846 aa9.59□□□□□ -0.87
TRPM1-206ENST00000558212 ATP7BP35670 1465 aa9.59□□□□□ -0.87
TRPM1-206ENST00000558212 OVOS2A0A0G2JMS6 1433 aa9.58□□□□□ -0.88
TRPM1-206ENST00000558212 OVOS2A0A0J9YW53 1432 aa9.58□□□□□ -0.88
TRPM1-206ENST00000558212 OVOS2Q6IE36 1432 aa9.58□□□□□ -0.88
TRPM1-206ENST00000558212 ZBTB24O43167 697 aaPredicted RBP9.58□□□□□ -0.88
TRPM1-206ENST00000558212 GIGYF1O75420 1035 aaPredicted RBP9.58□□□□□ -0.88
TRPM1-206ENST00000558212 NBPF20Q3BBV1 942 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms