RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 SCUBE2Q9NQ36 999 aa7.02□□□□□ -1.29
SPG11-208ENST00000558155 ZNF277Q9NRM2 450 aaPredicted RBP7.02□□□□□ -1.29
SPG11-208ENST00000558155 TIMELESSQ9UNS1 1208 aa7.02□□□□□ -1.29
SPG11-208ENST00000558155 ANKRD31Q8N7Z5 1873 aa7.01□□□□□ -1.29
SPG11-208ENST00000558155 A1BGP04217 495 aa7.01□□□□□ -1.29
SPG11-208ENST00000558155 ZNF790Q6PG37 636 aa7.01□□□□□ -1.29
SPG11-208ENST00000558155 CLEC4GQ6UXB4 293 aa7.01□□□□□ -1.29
SPG11-208ENST00000558155 PAXIP1Q6ZW49 1069 aaPredicted RBP7.01□□□□□ -1.29
SPG11-208ENST00000558155 NBPF5PQ86XG9 351 aaPredicted RBP7.01□□□□□ -1.29
SPG11-208ENST00000558155 GPC2Q8N158 579 aa7.01□□□□□ -1.29
SPG11-208ENST00000558155 JDP2Q8WYK2 163 aa7.01□□□□□ -1.29
SPG11-208ENST00000558155 ZNF496Q96IT1 587 aaPredicted RBP7.01□□□□□ -1.29
SPG11-208ENST00000558155 GPR101Q96P66 508 aaPredicted RBP7.01□□□□□ -1.29
SPG11-208ENST00000558155 FMNL2Q96PY5 1086 aa7.01□□□□□ -1.29
SPG11-208ENST00000558155 DDX21Q9NR30 783 aaKnown RBP eCLIP7.01□□□□□ -1.29
SPG11-208ENST00000558155 ZNF652Q9Y2D9 606 aa7.01□□□□□ -1.29
SPG11-208ENST00000558155 HEG1Q9ULI3 1381 aa7□□□□□ -1.29
SPG11-208ENST00000558155 FZD9O00144 591 aa7□□□□□ -1.29
SPG11-208ENST00000558155 CAMTA2O94983 1202 aa7□□□□□ -1.29
SPG11-208ENST00000558155 LMOD1P29536 600 aaPredicted RBP7□□□□□ -1.29
SPG11-208ENST00000558155 MAP2K2P36507 400 aa7□□□□□ -1.29
SPG11-208ENST00000558155 IARSP41252 1262 aaKnown RBP7□□□□□ -1.29
SPG11-208ENST00000558155 EIF6P56537 245 aaKnown RBP7□□□□□ -1.29
SPG11-208ENST00000558155 DZIP3Q86Y13 1208 aaKnown RBP7□□□□□ -1.29
SPG11-208ENST00000558155 CAPNS2Q96L46 248 aa7□□□□□ -1.29
SPG11-208ENST00000558155 CFAP44Q96MT7 982 aa7□□□□□ -1.29
SPG11-208ENST00000558155 ZNF541Q9H0D2 1346 aa7□□□□□ -1.29
SPG11-208ENST00000558155 CACNA1SQ13698 1873 aa6.99□□□□□ -1.29
SPG11-208ENST00000558155 KLRG2A4D1S0 409 aaPredicted RBP6.99□□□□□ -1.29
SPG11-208ENST00000558155 TTLL13PA6NNM8 815 aa6.99□□□□□ -1.29
SPG11-208ENST00000558155 GNAT3A8MTJ3 354 aa6.99□□□□□ -1.29
SPG11-208ENST00000558155 DIAPH1O60610 1272 aaKnown RBP6.99□□□□□ -1.29
SPG11-208ENST00000558155 GTF2E1P29083 439 aaPredicted RBP6.99□□□□□ -1.29
SPG11-208ENST00000558155 TIE1P35590 1138 aa6.99□□□□□ -1.29
SPG11-208ENST00000558155 EIF4G2P78344 907 aaKnown RBP eCLIP6.99□□□□□ -1.29
SPG11-208ENST00000558155 GRM1Q13255 1194 aa6.99□□□□□ -1.29
SPG11-208ENST00000558155 GRIPAP1Q4V328 841 aa6.99□□□□□ -1.29
SPG11-208ENST00000558155 CC2D2BQ6DHV5 1058 aa6.99□□□□□ -1.29
SPG11-208ENST00000558155 IL17REQ8NFR9 667 aa6.99□□□□□ -1.29
SPG11-208ENST00000558155 GJA3Q9Y6H8 435 aa6.99□□□□□ -1.29
SPG11-208ENST00000558155 RNF123Q5XPI4 1314 aa6.99□□□□□ -1.29
SPG11-208ENST00000558155 MRC1P22897 1456 aa6.98□□□□□ -1.29
SPG11-208ENST00000558155 BTBD11A6QL63 1104 aa6.98□□□□□ -1.29
SPG11-208ENST00000558155 RGL2O15211 777 aa6.98□□□□□ -1.29
SPG11-208ENST00000558155 CA12O43570 354 aa6.98□□□□□ -1.29
SPG11-208ENST00000558155 CYP4F22Q6NT55 531 aa6.98□□□□□ -1.29
SPG11-208ENST00000558155 USP50Q70EL3 339 aaPredicted RBP6.98□□□□□ -1.29
SPG11-208ENST00000558155 GAS2L2Q8NHY3 880 aa6.98□□□□□ -1.29
SPG11-208ENST00000558155 PSMD1Q99460 953 aa6.98□□□□□ -1.29
SPG11-208ENST00000558155 COL11A2P13942 1736 aaPredicted RBP6.97□□□□□ -1.29
SPG11-208ENST00000558155 CST9Q5W186 159 aa6.97□□□□□ -1.29
SPG11-208ENST00000558155 MCOLN1Q9GZU1 580 aa6.97□□□□□ -1.29
SPG11-208ENST00000558155 TMX4Q9H1E5 349 aaPredicted RBP6.97□□□□□ -1.29
SPG11-208ENST00000558155 NIP7Q9Y221 180 aaKnown RBP eCLIP6.97□□□□□ -1.29
SPG11-208ENST00000558155 USP16Q9Y5T5 823 aa6.97□□□□□ -1.29
SPG11-208ENST00000558155 TLL2Q9Y6L7 1015 aa6.97□□□□□ -1.29
SPG11-208ENST00000558155 ARFGEF2Q9Y6D5 1785 aa6.97□□□□□ -1.29
SPG11-208ENST00000558155 UBR2Q8IWV8 1755 aa6.96□□□□□ -1.3
SPG11-208ENST00000558155 FAM177BA6PVY3 158 aa6.96□□□□□ -1.3
SPG11-208ENST00000558155 SNRPA1P09661 255 aaKnown RBP6.96□□□□□ -1.3
SPG11-208ENST00000558155 HSPA5P11021 654 aaKnown RBP6.96□□□□□ -1.3
SPG11-208ENST00000558155 EPS15P42566 896 aa6.96□□□□□ -1.3
SPG11-208ENST00000558155 OLFM4Q6UX06 510 aa6.96□□□□□ -1.3
SPG11-208ENST00000558155 LARGE2Q8N3Y3 721 aa6.96□□□□□ -1.3
SPG11-208ENST00000558155 NYXQ9GZU5 481 aa6.96□□□□□ -1.3
SPG11-208ENST00000558155 CASP8AP2Q9UKL3 1982 aa6.96□□□□□ -1.3
SPG11-208ENST00000558155 TRPM7Q96QT4 1865 aa6.96□□□□□ -1.3
SPG11-208ENST00000558155 ADAMTSL1Q8N6G6 1762 aa6.95□□□□□ -1.3
SPG11-208ENST00000558155 PCNTO95613 3336 aa6.95□□□□□ -1.3
SPG11-208ENST00000558155 U2SURPO15042 1029 aaKnown RBP6.95□□□□□ -1.3
SPG11-208ENST00000558155 KCNQ3O43525 872 aa6.95□□□□□ -1.3
SPG11-208ENST00000558155 AOC2O75106 756 aa6.95□□□□□ -1.3
SPG11-208ENST00000558155 CELF2O95319 508 aaKnown RBP6.95□□□□□ -1.3
SPG11-208ENST00000558155 PIP4K2AP48426 406 aaPredicted RBP6.95□□□□□ -1.3
SPG11-208ENST00000558155 BRPF1P55201 1214 aaPredicted RBP6.95□□□□□ -1.3
SPG11-208ENST00000558155 FMR1Q06787 632 aaKnown RBP eCLIP6.95□□□□□ -1.3
SPG11-208ENST00000558155 DGKZQ13574 1117 aa6.95□□□□□ -1.3
SPG11-208ENST00000558155 AMER1Q5JTC6 1135 aaPredicted RBP6.95□□□□□ -1.3
SPG11-208ENST00000558155 NIM1KQ8IY84 436 aa6.95□□□□□ -1.3
SPG11-208ENST00000558155 RPGRQ92834 1020 aaKnown RBP6.95□□□□□ -1.3
SPG11-208ENST00000558155 RBM17Q96I25 401 aaKnown RBP6.95□□□□□ -1.3
SPG11-208ENST00000558155 HHIPL1Q96JK4 782 aa6.95□□□□□ -1.3
SPG11-208ENST00000558155 ADARB2Q9NS39 739 aaKnown RBP6.95□□□□□ -1.3
SPG11-208ENST00000558155 TSKSQ9UJT2 592 aa6.95□□□□□ -1.3
SPG11-208ENST00000558155 SCN7AQ01118 1682 aa6.94□□□□□ -1.3
SPG11-208ENST00000558155 TRAF5O00463 557 aa6.94□□□□□ -1.3
SPG11-208ENST00000558155 HOXA10P31260 410 aaPredicted RBP6.94□□□□□ -1.3
SPG11-208ENST00000558155 SCNN1DP51172 638 aa6.94□□□□□ -1.3
SPG11-208ENST00000558155 SAPCD2Q86UD0 394 aa6.94□□□□□ -1.3
SPG11-208ENST00000558155 RTF1Q92541 710 aaKnown RBP6.94□□□□□ -1.3
SPG11-208ENST00000558155 CRAMP1Q96RY5 1269 aa6.94□□□□□ -1.3
SPG11-208ENST00000558155 VPS33BQ9H267 617 aa6.94□□□□□ -1.3
SPG11-208ENST00000558155 NBPF26B4DH59 902 aa6.93□□□□□ -1.3
SPG11-208ENST00000558155 ERVV-1B6SEH8 477 aa6.93□□□□□ -1.3
SPG11-208ENST00000558155 NOGQ13253 232 aa6.93□□□□□ -1.3
SPG11-208ENST00000558155 HLFQ16534 295 aa6.93□□□□□ -1.3
SPG11-208ENST00000558155 CRY2Q49AN0 593 aa6.93□□□□□ -1.3
SPG11-208ENST00000558155 CIAPIN1Q6FI81 312 aa6.93□□□□□ -1.3
SPG11-208ENST00000558155 NBPF10Q6P3W6 841 aaKnown RBP6.93□□□□□ -1.3
SPG11-208ENST00000558155 CDC37L1Q7L3B6 337 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms