RNA–Protein interactions for RNA: ENST00000557948.1

TRPM1-204, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-204ENST00000557948 CNKSR1Q969H4 720 aa8.17□□□□□ -1.1
TRPM1-204ENST00000557948 LARP6Q9BRS8 491 aaKnown RBP8.17□□□□□ -1.1
TRPM1-204ENST00000557948 ZNF408Q9H9D4 720 aa8.17□□□□□ -1.1
TRPM1-204ENST00000557948 ARFGEF2Q9Y6D5 1785 aa8.17□□□□□ -1.1
TRPM1-204ENST00000557948 FBLN1P23142 703 aa8.16□□□□□ -1.1
TRPM1-204ENST00000557948 PRPF40BQ6NWY9 871 aaKnown RBP8.16□□□□□ -1.1
TRPM1-204ENST00000557948 USP50Q70EL3 339 aaPredicted RBP8.16□□□□□ -1.1
TRPM1-204ENST00000557948 SYNE4Q8N205 404 aa8.16□□□□□ -1.1
TRPM1-204ENST00000557948 COG3Q96JB2 828 aa8.16□□□□□ -1.1
TRPM1-204ENST00000557948 GJA3Q9Y6H8 435 aa8.16□□□□□ -1.1
TRPM1-204ENST00000557948 FZD9O00144 591 aa8.15□□□□□ -1.1
TRPM1-204ENST00000557948 HUNKP57058 714 aa8.15□□□□□ -1.1
TRPM1-204ENST00000557948 MKRN3Q13064 507 aaKnown RBP8.15□□□□□ -1.1
TRPM1-204ENST00000557948 DIEXFQ68CQ4 756 aaKnown RBP8.15□□□□□ -1.1
TRPM1-204ENST00000557948 MPNDQ8N594 471 aa8.15□□□□□ -1.1
TRPM1-204ENST00000557948 TMC1Q8TDI8 760 aa8.15□□□□□ -1.1
TRPM1-204ENST00000557948 ZNF277Q9NRM2 450 aaPredicted RBP8.15□□□□□ -1.1
TRPM1-204ENST00000557948 TTLL13PA6NNM8 815 aa8.14□□□□□ -1.11
TRPM1-204ENST00000557948 SEMA3EO15041 775 aa8.14□□□□□ -1.11
TRPM1-204ENST00000557948 PTCD1O75127 700 aaKnown RBP8.14□□□□□ -1.11
TRPM1-204ENST00000557948 EPS15P42566 896 aa8.14□□□□□ -1.11
TRPM1-204ENST00000557948 KIF23Q02241 960 aaPredicted RBP8.14□□□□□ -1.11
TRPM1-204ENST00000557948 FKBP4Q02790 459 aaKnown RBP eCLIP8.14□□□□□ -1.11
TRPM1-204ENST00000557948 RRS1Q15050 365 aaKnown RBP8.14□□□□□ -1.11
TRPM1-204ENST00000557948 CCDC93Q567U6 631 aa8.14□□□□□ -1.11
TRPM1-204ENST00000557948 FBXO46Q6PJ61 603 aaPredicted RBP8.14□□□□□ -1.11
TRPM1-204ENST00000557948 IFNL2Q8IZJ0 200 aa8.14□□□□□ -1.11
TRPM1-204ENST00000557948 BRIP1Q9BX63 1249 aa8.14□□□□□ -1.11
TRPM1-204ENST00000557948 COL25A1Q9BXS0 654 aaPredicted RBP8.14□□□□□ -1.11
TRPM1-204ENST00000557948 NARFQ9UHQ1 456 aa8.14□□□□□ -1.11
TRPM1-204ENST00000557948 BCORQ6W2J9 1755 aa8.14□□□□□ -1.11
TRPM1-204ENST00000557948 PAPPA2Q9BXP8 1791 aa8.14□□□□□ -1.11
TRPM1-204ENST00000557948 KIAA0100Q14667 2235 aaKnown RBP8.13□□□□□ -1.11
TRPM1-204ENST00000557948 RBBP6Q7Z6E9 1792 aaKnown RBP8.13□□□□□ -1.11
TRPM1-204ENST00000557948 PHKG2P15735 406 aa8.13□□□□□ -1.11
TRPM1-204ENST00000557948 EIF6P56537 245 aaKnown RBP8.13□□□□□ -1.11
TRPM1-204ENST00000557948 STYK1Q6J9G0 422 aa8.13□□□□□ -1.11
TRPM1-204ENST00000557948 JDP2Q8WYK2 163 aa8.13□□□□□ -1.11
TRPM1-204ENST00000557948 CCDC102AQ96A19 550 aa8.13□□□□□ -1.11
TRPM1-204ENST00000557948 GLIS2Q9BZE0 524 aaPredicted RBP8.13□□□□□ -1.11
TRPM1-204ENST00000557948 CRISPLD2Q9H0B8 497 aa8.13□□□□□ -1.11
TRPM1-204ENST00000557948 BMP2KQ9NSY1 1161 aaPredicted RBP8.13□□□□□ -1.11
TRPM1-204ENST00000557948 TERF2IPQ9NYB0 399 aa8.13□□□□□ -1.11
TRPM1-204ENST00000557948 TJP1Q07157 1748 aa8.12□□□□□ -1.11
TRPM1-204ENST00000557948 POTEFA5A3E0 1075 aa8.12□□□□□ -1.11
TRPM1-204ENST00000557948 FAM155AB1AL88 458 aaPredicted RBP8.12□□□□□ -1.11
TRPM1-204ENST00000557948 ERVV-2B6SEH9 535 aa8.12□□□□□ -1.11
TRPM1-204ENST00000557948 GALR2O43603 387 aaPredicted RBP8.12□□□□□ -1.11
TRPM1-204ENST00000557948 PDE4AP27815 886 aa8.12□□□□□ -1.11
TRPM1-204ENST00000557948 IARSP41252 1262 aaKnown RBP8.12□□□□□ -1.11
TRPM1-204ENST00000557948 SCNN1DP51172 638 aa8.12□□□□□ -1.11
TRPM1-204ENST00000557948 RGMBQ6NW40 437 aa8.12□□□□□ -1.11
TRPM1-204ENST00000557948 INTS5Q6P9B9 1019 aaKnown RBP8.12□□□□□ -1.11
TRPM1-204ENST00000557948 OTUD5Q96G74 571 aa8.12□□□□□ -1.11
TRPM1-204ENST00000557948 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.12□□□□□ -1.11
TRPM1-204ENST00000557948 NPHP1O15259 732 aa8.11□□□□□ -1.11
TRPM1-204ENST00000557948 TIE1P35590 1138 aa8.11□□□□□ -1.11
TRPM1-204ENST00000557948 MFSD10Q14728 455 aa8.11□□□□□ -1.11
TRPM1-204ENST00000557948 HSP90AB2PQ58FF8 381 aa8.11□□□□□ -1.11
TRPM1-204ENST00000557948 INTS3Q68E01 1043 aaKnown RBP8.11□□□□□ -1.11
TRPM1-204ENST00000557948 RTKN2Q8IZC4 609 aa8.11□□□□□ -1.11
TRPM1-204ENST00000557948 CCDC24Q8N4L8 307 aa8.11□□□□□ -1.11
TRPM1-204ENST00000557948 ZNF296Q8WUU4 475 aaPredicted RBP8.11□□□□□ -1.11
TRPM1-204ENST00000557948 MASTLQ96GX5 879 aa8.11□□□□□ -1.11
TRPM1-204ENST00000557948 A0A1W2PP64 1363 aa8.1□□□□□ -1.11
TRPM1-204ENST00000557948 COL15A1P39059 1388 aa8.1□□□□□ -1.11
TRPM1-204ENST00000557948 SOS1Q07889 1333 aaPredicted RBP8.1□□□□□ -1.11
TRPM1-204ENST00000557948 H0YGN5 161 aa8.1□□□□□ -1.11
TRPM1-204ENST00000557948 SRGNP10124 158 aa8.1□□□□□ -1.11
TRPM1-204ENST00000557948 ZNF157P51786 506 aaPredicted RBP8.1□□□□□ -1.11
TRPM1-204ENST00000557948 EVX2Q03828 476 aa8.1□□□□□ -1.11
TRPM1-204ENST00000557948 DDX27Q96GQ7 796 aaKnown RBP8.1□□□□□ -1.11
TRPM1-204ENST00000557948 CSRNP1Q96S65 589 aa8.1□□□□□ -1.11
TRPM1-204ENST00000557948 SLC12A5Q9H2X9 1139 aa8.1□□□□□ -1.11
TRPM1-204ENST00000557948 BCL2L12Q9HB09 334 aa8.1□□□□□ -1.11
TRPM1-204ENST00000557948 PRDM6Q9NQX0 595 aa8.1□□□□□ -1.11
TRPM1-204ENST00000557948 ADARB2Q9NS39 739 aaKnown RBP8.1□□□□□ -1.11
TRPM1-204ENST00000557948 UNC80Q8N2C7 3258 aa8.1□□□□□ -1.11
TRPM1-204ENST00000557948 CABP4P57796 275 aa8.09□□□□□ -1.11
TRPM1-204ENST00000557948 PRR5LQ6MZQ0 368 aa8.09□□□□□ -1.11
TRPM1-204ENST00000557948 CDC37L1Q7L3B6 337 aa8.09□□□□□ -1.11
TRPM1-204ENST00000557948 C7orf43Q8WVR3 580 aa8.09□□□□□ -1.11
TRPM1-204ENST00000557948 RBM27Q9P2N5 1060 aaKnown RBP8.09□□□□□ -1.11
TRPM1-204ENST00000557948 TRIM35Q9UPQ4 493 aa8.09□□□□□ -1.11
TRPM1-204ENST00000557948 FLT4P35916 1363 aa8.09□□□□□ -1.12
TRPM1-204ENST00000557948 TESPA1A2RU30 521 aaPredicted RBP8.08□□□□□ -1.12
TRPM1-204ENST00000557948 HSP90AB1P08238 724 aaKnown RBP8.08□□□□□ -1.12
TRPM1-204ENST00000557948 ST5P78524 1137 aa8.08□□□□□ -1.12
TRPM1-204ENST00000557948 C2orf69Q8N8R5 385 aa8.08□□□□□ -1.12
TRPM1-204ENST00000557948 RANBP2P49792 3224 aaKnown RBP8.07□□□□□ -1.12
TRPM1-204ENST00000557948 EN2P19622 333 aaPredicted RBP8.07□□□□□ -1.12
TRPM1-204ENST00000557948 OLFM4Q6UX06 510 aa8.07□□□□□ -1.12
TRPM1-204ENST00000557948 CNBD1Q8NA66 436 aa8.07□□□□□ -1.12
TRPM1-204ENST00000557948 GBA2Q9HCG7 927 aaPredicted RBP8.07□□□□□ -1.12
TRPM1-204ENST00000557948 GPRC5DQ9NZD1 345 aa8.07□□□□□ -1.12
TRPM1-204ENST00000557948 TONSLQ96HA7 1378 aa8.07□□□□□ -1.12
TRPM1-204ENST00000557948 CENPFP49454 3210 aa8.07□□□□□ -1.12
TRPM1-204ENST00000557948 ANKRD26Q9UPS8 1709 aa8.06□□□□□ -1.12
TRPM1-204ENST00000557948 NCAPD2Q15021 1401 aa8.06□□□□□ -1.12
TRPM1-204ENST00000557948 HAX1O00165 279 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms