RNA–Protein interactions for RNA: ENST00000557947.5

TCF12-208, Transcript of transcription factor 12, human

TSL 4

Gene TCF12, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-208	ENST00000557947	WDR90	Q96KV7	1748 aa		28.46	■■■□□ 2.15
TCF12-208	ENST00000557947	HOXA10	P31260	410 aa	Predicted RBP	28.46	■■■□□ 2.15
TCF12-208	ENST00000557947	APLP1	P51693	650 aa		28.46	■■■□□ 2.15
TCF12-208	ENST00000557947	FKBP4	Q02790	459 aa	Known RBP eCLIP	28.46	■■■□□ 2.15
TCF12-208	ENST00000557947	MBIP	Q9NS73	344 aa		28.46	■■■□□ 2.15
TCF12-208	ENST00000557947	HOXB7	P09629	217 aa		28.45	■■■□□ 2.14
TCF12-208	ENST00000557947	ZEB1	P37275	1124 aa	Predicted RBP	28.45	■■■□□ 2.14
TCF12-208	ENST00000557947	DPY19L2	Q6NUT2	758 aa		28.45	■■■□□ 2.14
TCF12-208	ENST00000557947	PPP1R42	Q7Z4L9	355 aa		28.45	■■■□□ 2.14
TCF12-208	ENST00000557947	SLC51A	Q86UW1	340 aa		28.45	■■■□□ 2.14
TCF12-208	ENST00000557947	HDGFL1	Q5TGJ6	251 aa		28.44	■■■□□ 2.14
TCF12-208	ENST00000557947	ZNF277	Q9NRM2	450 aa	Predicted RBP	28.44	■■■□□ 2.14
TCF12-208	ENST00000557947	SLC10A5	Q5PT55	438 aa		28.43	■■■□□ 2.14
TCF12-208	ENST00000557947	DUSP27	Q5VZP5	1158 aa		28.43	■■■□□ 2.14
TCF12-208	ENST00000557947	NLRP10	Q86W26	655 aa		28.43	■■■□□ 2.14
TCF12-208	ENST00000557947	RTKN2	Q8IZC4	609 aa		28.43	■■■□□ 2.14
TCF12-208	ENST00000557947	UTP14A	Q9BVJ6	771 aa	Known RBP	28.43	■■■□□ 2.14
TCF12-208	ENST00000557947	ANKRD36C	Q5JPF3	1778 aa		28.42	■■■□□ 2.14
TCF12-208	ENST00000557947	DDN	O94850	711 aa	Predicted RBP	28.42	■■■□□ 2.14
TCF12-208	ENST00000557947	TCIRG1	Q13488	830 aa		28.42	■■■□□ 2.14
TCF12-208	ENST00000557947	DNAJC5G	Q8N7S2	189 aa		28.42	■■■□□ 2.14
TCF12-208	ENST00000557947	SYNE4	Q8N205	404 aa		28.41	■■■□□ 2.14
TCF12-208	ENST00000557947	RPGR	Q92834	1020 aa	Known RBP	28.41	■■■□□ 2.14
TCF12-208	ENST00000557947	CRAMP1	Q96RY5	1269 aa		28.41	■■■□□ 2.14
TCF12-208	ENST00000557947	SMC1B	Q8NDV3	1235 aa		28.4	■■■□□ 2.14
TCF12-208	ENST00000557947	IFT57	Q9NWB7	429 aa		28.4	■■■□□ 2.14
TCF12-208	ENST00000557947	HTRA3	P83110	453 aa		28.39	■■■□□ 2.14
TCF12-208	ENST00000557947	HSP90AB3P	Q58FF7	597 aa		28.39	■■■□□ 2.14
TCF12-208	ENST00000557947	DBF4	Q9UBU7	674 aa	Predicted RBP	28.39	■■■□□ 2.14
TCF12-208	ENST00000557947	RBM17	Q96I25	401 aa	Known RBP	28.38	■■■□□ 2.13
TCF12-208	ENST00000557947	PLBD2	Q8NHP8	589 aa		28.37	■■■□□ 2.13
TCF12-208	ENST00000557947	NLRP3	Q96P20	1036 aa		28.37	■■■□□ 2.13
TCF12-208	ENST00000557947	PSMD1	Q99460	953 aa		28.37	■■■□□ 2.13
TCF12-208	ENST00000557947	RNF123	Q5XPI4	1314 aa		28.37	■■■□□ 2.13
TCF12-208	ENST00000557947	IARS	P41252	1262 aa	Known RBP	28.36	■■■□□ 2.13
TCF12-208	ENST00000557947	GNAI1	P63096	354 aa		28.36	■■■□□ 2.13
TCF12-208	ENST00000557947	ZNF541	Q9H0D2	1346 aa		28.36	■■■□□ 2.13
TCF12-208	ENST00000557947	HCLS1	P14317	486 aa	Predicted RBP	28.35	■■■□□ 2.13
TCF12-208	ENST00000557947	CC2D2B	Q6DHV5	1058 aa		28.35	■■■□□ 2.13
TCF12-208	ENST00000557947	ANKRD13D	Q6ZTN6	518 aa		28.35	■■■□□ 2.13
TCF12-208	ENST00000557947	ZNF428	Q96B54	188 aa		28.35	■■■□□ 2.13
TCF12-208	ENST00000557947	COL4A5	P29400	1685 aa		28.35	■■■□□ 2.13
TCF12-208	ENST00000557947	ZNF316	A6NFI3	1004 aa	Predicted RBP	28.34	■■■□□ 2.13
TCF12-208	ENST00000557947	PPEF1	O14829	653 aa	Predicted RBP	28.34	■■■□□ 2.13
TCF12-208	ENST00000557947	ISCA1	Q9BUE6	129 aa		28.34	■■■□□ 2.13
TCF12-208	ENST00000557947	LAMB2	P55268	1798 aa		28.34	■■■□□ 2.13
TCF12-208	ENST00000557947	ELL2	O00472	640 aa	Predicted RBP	28.33	■■■□□ 2.13
TCF12-208	ENST00000557947	TCERG1	O14776	1098 aa	Known RBP	28.33	■■■□□ 2.13
TCF12-208	ENST00000557947	CALD1	Q05682	793 aa	Known RBP	28.33	■■■□□ 2.13
TCF12-208	ENST00000557947	C8orf58	Q8NAV2	365 aa		28.33	■■■□□ 2.13
TCF12-208	ENST00000557947	L3MBTL3	Q96JM7	780 aa	Predicted RBP	28.33	■■■□□ 2.13
TCF12-208	ENST00000557947	HYPK	Q9NX55	129 aa		28.33	■■■□□ 2.13
TCF12-208	ENST00000557947	TRMT112	Q9UI30	125 aa	Known RBP	28.33	■■■□□ 2.13
TCF12-208	ENST00000557947	FZD9	O00144	591 aa		28.32	■■■□□ 2.12
TCF12-208	ENST00000557947	POTEI	P0CG38	1075 aa		28.32	■■■□□ 2.12
TCF12-208	ENST00000557947	POTEJ	P0CG39	1038 aa		28.32	■■■□□ 2.12
TCF12-208	ENST00000557947	ABCC4	O15439	1325 aa		28.32	■■■□□ 2.12
TCF12-208	ENST00000557947	SH3TC1	Q8TE82	1336 aa		28.31	■■■□□ 2.12
TCF12-208	ENST00000557947	ATP5J2-PTCD1	G3V325	749 aa		28.3	■■■□□ 2.12
TCF12-208	ENST00000557947	PHAX	Q9H814	394 aa	Known RBP	28.3	■■■□□ 2.12
TCF12-208	ENST00000557947	ATP6V0A2	Q9Y487	856 aa		28.29	■■■□□ 2.12
TCF12-208	ENST00000557947	GRIPAP1	Q4V328	841 aa		28.28	■■■□□ 2.12
TCF12-208	ENST00000557947	TSPYL6	Q8N831	410 aa		28.27	■■■□□ 2.12
TCF12-208	ENST00000557947	TAF1D	Q9H5J8	278 aa	Predicted RBP	28.27	■■■□□ 2.12
TCF12-208	ENST00000557947	DDX60	Q8IY21	1712 aa	Known RBP	28.26	■■■□□ 2.12
TCF12-208	ENST00000557947	TRIM28	Q13263	835 aa	Known RBP	28.26	■■■□□ 2.11
TCF12-208	ENST00000557947	CCDC27	Q2M243	656 aa		28.26	■■■□□ 2.11
TCF12-208	ENST00000557947	FAM89A	Q96GI7	184 aa		28.26	■■■□□ 2.11
TCF12-208	ENST00000557947	SCN4A	P35499	1836 aa		28.26	■■■□□ 2.11
TCF12-208	ENST00000557947	WWC1	Q8IX03	1113 aa		28.25	■■■□□ 2.11
TCF12-208	ENST00000557947	TSR2	Q969E8	191 aa	Known RBP	28.25	■■■□□ 2.11
TCF12-208	ENST00000557947	KLRG1	Q96E93	195 aa		28.25	■■■□□ 2.11
TCF12-208	ENST00000557947	TAF1	P21675	1872 aa		28.24	■■■□□ 2.11
TCF12-208	ENST00000557947	IQCA1L	A6NCM1	817 aa		28.24	■■■□□ 2.11
TCF12-208	ENST00000557947	BBOX1	O75936	387 aa		28.24	■■■□□ 2.11
TCF12-208	ENST00000557947	CHADL	Q6NUI6	762 aa		28.24	■■■□□ 2.11
TCF12-208	ENST00000557947	JDP2	Q8WYK2	163 aa		28.24	■■■□□ 2.11
TCF12-208	ENST00000557947	MRS2	Q9HD23	443 aa		28.24	■■■□□ 2.11
TCF12-208	ENST00000557947	GRAP	Q13588	217 aa		28.22	■■■□□ 2.11
TCF12-208	ENST00000557947	DDX46	Q7L014	1031 aa	Known RBP	28.22	■■■□□ 2.11
TCF12-208	ENST00000557947	RIC3	Q7Z5B4	369 aa		28.22	■■■□□ 2.11
TCF12-208	ENST00000557947	SP8	Q8IXZ3	490 aa		28.22	■■■□□ 2.11
TCF12-208	ENST00000557947	LARGE2	Q8N3Y3	721 aa		28.22	■■■□□ 2.11
TCF12-208	ENST00000557947	GRAPL	Q8TC17	118 aa	Predicted RBP	28.22	■■■□□ 2.11
TCF12-208	ENST00000557947	RTFDC1	Q9BY42	306 aa	Predicted RBP	28.22	■■■□□ 2.11
TCF12-208	ENST00000557947	ANP32C	O43423	234 aa		28.21	■■■□□ 2.11
TCF12-208	ENST00000557947	RTL5	Q5HYW3	569 aa	Predicted RBP	28.21	■■■□□ 2.11
TCF12-208	ENST00000557947	GPC2	Q8N158	579 aa		28.21	■■■□□ 2.11
TCF12-208	ENST00000557947	COL4A1	P02462	1669 aa		28.21	■■■□□ 2.11
TCF12-208	ENST00000557947	GOLGA2	Q08379	1002 aa		28.2	■■■□□ 2.1
TCF12-208	ENST00000557947	SF3B3	Q15393	1217 aa	Known RBP	28.2	■■■□□ 2.1
TCF12-208	ENST00000557947	AOC3	Q16853	763 aa		28.2	■■■□□ 2.1
TCF12-208	ENST00000557947	HACL1	Q9UJ83	578 aa		28.2	■■■□□ 2.1
TCF12-208	ENST00000557947	CCDC30	Q5VVM6	783 aa		28.19	■■■□□ 2.1
TCF12-208	ENST00000557947	LDHD	Q86WU2	507 aa		28.19	■■■□□ 2.1
TCF12-208	ENST00000557947	PPIP5K2	O43314	1243 aa		28.18	■■■□□ 2.1
TCF12-208	ENST00000557947	EPHX2	P34913	555 aa		28.18	■■■□□ 2.1
TCF12-208	ENST00000557947	EIF6	P56537	245 aa	Known RBP	28.18	■■■□□ 2.1
TCF12-208	ENST00000557947	NCBP3	Q53F19	620 aa	Known RBP	28.18	■■■□□ 2.1
TCF12-208	ENST00000557947	JMY	Q8N9B5	988 aa		28.18	■■■□□ 2.1

Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms