RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 IGKV5-2P06315 115 aa32.51■■■□□ 2.8
SMAD6-202ENST00000557916 A0A0G2JLW4 131 aa32.51■■■□□ 2.79
SMAD6-202ENST00000557916 PDE6BP35913 854 aa32.51■■■□□ 2.79
SMAD6-202ENST00000557916 CCDC191Q8NCU4 936 aa32.51■■■□□ 2.79
SMAD6-202ENST00000557916 RNF123Q5XPI4 1314 aa32.5■■■□□ 2.79
SMAD6-202ENST00000557916 PXDNLA1KZ92 1463 aa32.5■■■□□ 2.79
SMAD6-202ENST00000557916 DPEP1P16444 411 aa32.5■■■□□ 2.79
SMAD6-202ENST00000557916 CWC25Q9NXE8 425 aaPredicted RBP32.5■■■□□ 2.79
SMAD6-202ENST00000557916 NOB1Q9ULX3 412 aaKnown RBP32.49■■■□□ 2.79
SMAD6-202ENST00000557916 BCAR3O75815 825 aa32.48■■■□□ 2.79
SMAD6-202ENST00000557916 CHRNA5P30532 468 aa32.48■■■□□ 2.79
SMAD6-202ENST00000557916 CWF19L2Q2TBE0 894 aaKnown RBP32.48■■■□□ 2.79
SMAD6-202ENST00000557916 SH3TC1Q8TE82 1336 aa32.48■■■□□ 2.79
SMAD6-202ENST00000557916 ABCC12Q96J65 1359 aa32.47■■■□□ 2.79
SMAD6-202ENST00000557916 NEURL1BA8MQ27 555 aa32.47■■■□□ 2.79
SMAD6-202ENST00000557916 C2CD5Q86YS7 1000 aa32.47■■■□□ 2.79
SMAD6-202ENST00000557916 LINS1Q8NG48 757 aa32.47■■■□□ 2.79
SMAD6-202ENST00000557916 SLC4A10Q6U841 1118 aa32.46■■■□□ 2.79
SMAD6-202ENST00000557916 SYNE4Q8N205 404 aa32.46■■■□□ 2.79
SMAD6-202ENST00000557916 KIF16BQ96L93 1317 aa32.46■■■□□ 2.79
SMAD6-202ENST00000557916 ANKRD31Q8N7Z5 1873 aa32.45■■■□□ 2.79
SMAD6-202ENST00000557916 H0YIN7 160 aa32.45■■■□□ 2.79
SMAD6-202ENST00000557916 BEND3Q5T5X7 828 aa32.45■■■□□ 2.79
SMAD6-202ENST00000557916 FAM89AQ96GI7 184 aa32.45■■■□□ 2.79
SMAD6-202ENST00000557916 PDZRN3Q9UPQ7 1066 aa32.45■■■□□ 2.79
SMAD6-202ENST00000557916 KIAA1551Q9HCM1 1747 aa32.44■■■□□ 2.78
SMAD6-202ENST00000557916 SLC10A5Q5PT55 438 aa32.44■■■□□ 2.78
SMAD6-202ENST00000557916 N4BP2Q86UW6 1770 aaPredicted RBP32.44■■■□□ 2.78
SMAD6-202ENST00000557916 KCNA3P22001 575 aa32.43■■■□□ 2.78
SMAD6-202ENST00000557916 RTL5Q5HYW3 569 aaPredicted RBP32.43■■■□□ 2.78
SMAD6-202ENST00000557916 ZBTB38Q8NAP3 1195 aaPredicted RBP32.43■■■□□ 2.78
SMAD6-202ENST00000557916 KLRG2A4D1S0 409 aaPredicted RBP32.43■■■□□ 2.78
SMAD6-202ENST00000557916 PCCAP05165 728 aaPredicted RBP32.42■■■□□ 2.78
SMAD6-202ENST00000557916 API5Q9BZZ5 524 aaKnown RBP32.42■■■□□ 2.78
SMAD6-202ENST00000557916 WWC3Q9ULE0 1092 aa32.42■■■□□ 2.78
SMAD6-202ENST00000557916 RIC1Q4ADV7 1423 aa32.41■■■□□ 2.78
SMAD6-202ENST00000557916 HCLS1P14317 486 aaPredicted RBP32.41■■■□□ 2.78
SMAD6-202ENST00000557916 GCKRQ14397 625 aa32.41■■■□□ 2.78
SMAD6-202ENST00000557916 ARHGAP45Q92619 1136 aa32.41■■■□□ 2.78
SMAD6-202ENST00000557916 FRAT1Q92837 279 aaPredicted RBP32.41■■■□□ 2.78
SMAD6-202ENST00000557916 IPO8O15397 1037 aaKnown RBP32.4■■■□□ 2.78
SMAD6-202ENST00000557916 NLRP3Q96P20 1036 aa32.4■■■□□ 2.78
SMAD6-202ENST00000557916 SRCIN1Q9C0H9 1055 aa32.4■■■□□ 2.78
SMAD6-202ENST00000557916 PIM2Q9P1W9 311 aa32.4■■■□□ 2.78
SMAD6-202ENST00000557916 SRGNP10124 158 aa32.39■■■□□ 2.78
SMAD6-202ENST00000557916 PELP1Q8IZL8 1130 aaKnown RBP32.39■■■□□ 2.78
SMAD6-202ENST00000557916 JARID2Q92833 1246 aaPredicted RBP32.39■■■□□ 2.78
SMAD6-202ENST00000557916 IRS4O14654 1257 aaPredicted RBP32.38■■■□□ 2.77
SMAD6-202ENST00000557916 ALDH1L1O75891 902 aa32.37■■■□□ 2.77
SMAD6-202ENST00000557916 C3orf67Q6ZVT6 689 aa32.37■■■□□ 2.77
SMAD6-202ENST00000557916 ZNF622Q969S3 477 aaKnown RBP eCLIP32.37■■■□□ 2.77
SMAD6-202ENST00000557916 TNRC6CQ9HCJ0 1690 aaKnown RBP32.37■■■□□ 2.77
SMAD6-202ENST00000557916 CRY2Q49AN0 593 aa32.36■■■□□ 2.77
SMAD6-202ENST00000557916 MASTLQ96GX5 879 aa32.36■■■□□ 2.77
SMAD6-202ENST00000557916 RCAN3Q9UKA8 241 aa32.36■■■□□ 2.77
SMAD6-202ENST00000557916 NPR1P16066 1061 aa32.35■■■□□ 2.77
SMAD6-202ENST00000557916 GPR162Q16538 588 aa32.35■■■□□ 2.77
SMAD6-202ENST00000557916 DCAF8L1A6NGE4 600 aa32.34■■■□□ 2.77
SMAD6-202ENST00000557916 H7C1W4 665 aa32.34■■■□□ 2.77
SMAD6-202ENST00000557916 HSP90B1P14625 803 aaKnown RBP32.34■■■□□ 2.77
SMAD6-202ENST00000557916 DALRD3Q5D0E6 543 aaKnown RBP32.34■■■□□ 2.77
SMAD6-202ENST00000557916 STYK1Q6J9G0 422 aa32.34■■■□□ 2.77
SMAD6-202ENST00000557916 UBE3BQ7Z3V4 1068 aa32.34■■■□□ 2.77
SMAD6-202ENST00000557916 COL11A2P13942 1736 aaPredicted RBP32.34■■■□□ 2.77
SMAD6-202ENST00000557916 CDHR2Q9BYE9 1310 aa32.34■■■□□ 2.77
SMAD6-202ENST00000557916 ATF7IPQ6VMQ6 1270 aa32.34■■■□□ 2.77
SMAD6-202ENST00000557916 TTLL6Q8N841 843 aa32.34■■■□□ 2.77
SMAD6-202ENST00000557916 BCS1LQ9Y276 419 aa32.34■■■□□ 2.77
SMAD6-202ENST00000557916 ZKSCAN2Q63HK3 967 aa32.33■■■□□ 2.77
SMAD6-202ENST00000557916 RPGRQ92834 1020 aaKnown RBP32.33■■■□□ 2.77
SMAD6-202ENST00000557916 TRIM27P14373 513 aa32.32■■■□□ 2.76
SMAD6-202ENST00000557916 YBX3P16989 372 aaKnown RBP eCLIP32.32■■■□□ 2.767e-7■■□□□ 14.4
SMAD6-202ENST00000557916 DLEC1Q9Y238 1755 aa32.31■■■□□ 2.76
SMAD6-202ENST00000557916 CNKSR1Q969H4 720 aa32.31■■■□□ 2.76
SMAD6-202ENST00000557916 C9orf78Q9NZ63 289 aaPredicted RBP32.31■■■□□ 2.76
SMAD6-202ENST00000557916 CCT4P50991 539 aaKnown RBP32.3■■■□□ 2.76
SMAD6-202ENST00000557916 DDX60Q8IY21 1712 aaKnown RBP32.3■■■□□ 2.76
SMAD6-202ENST00000557916 BRCA1P38398 1863 aaKnown RBP32.3■■■□□ 2.76
SMAD6-202ENST00000557916 GRM8O00222 908 aa32.29■■■□□ 2.76
SMAD6-202ENST00000557916 PDE8AO60658 829 aa32.29■■■□□ 2.76
SMAD6-202ENST00000557916 CASP7P55210 303 aa32.29■■■□□ 2.76
SMAD6-202ENST00000557916 RBM17Q96I25 401 aaKnown RBP32.29■■■□□ 2.76
SMAD6-202ENST00000557916 HOXA10P31260 410 aaPredicted RBP32.28■■■□□ 2.76
SMAD6-202ENST00000557916 TNNQ9UQP3 1299 aa32.28■■■□□ 2.76
SMAD6-202ENST00000557916 ABCC4O15439 1325 aa32.28■■■□□ 2.76
SMAD6-202ENST00000557916 ALDH1B1P30837 517 aa32.27■■■□□ 2.76
SMAD6-202ENST00000557916 SF3B3Q15393 1217 aaKnown RBP32.27■■■□□ 2.76
SMAD6-202ENST00000557916 CLUAP1Q96AJ1 413 aa32.27■■■□□ 2.76
SMAD6-202ENST00000557916 GOLGB1Q14789 3259 aaKnown RBP32.27■■■□□ 2.76
SMAD6-202ENST00000557916 LAMB2P55268 1798 aa32.25■■■□□ 2.75
SMAD6-202ENST00000557916 PRPF40BQ6NWY9 871 aaKnown RBP32.25■■■□□ 2.75
SMAD6-202ENST00000557916 CRAMP1Q96RY5 1269 aa32.25■■■□□ 2.75
SMAD6-202ENST00000557916 GRIN3BO60391 1043 aa32.24■■■□□ 2.75
SMAD6-202ENST00000557916 INTS3Q68E01 1043 aaKnown RBP32.24■■■□□ 2.75
SMAD6-202ENST00000557916 DDX46Q7L014 1031 aaKnown RBP32.24■■■□□ 2.75
SMAD6-202ENST00000557916 PLA2G12BQ9BX93 195 aa32.24■■■□□ 2.75
SMAD6-202ENST00000557916 CTSWP56202 376 aa32.23■■■□□ 2.75
SMAD6-202ENST00000557916 NBPF7P0C2Y1 421 aaPredicted RBP32.22■■■□□ 2.75
SMAD6-202ENST00000557916 CCDC152Q4G0S7 254 aa32.22■■■□□ 2.75
SMAD6-202ENST00000557916 USP44Q9H0E7 712 aa32.22■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms