RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 HOXB7P09629 217 aa11.72□□□□□ -0.53
CHD8-214ENST00000557727 PIP4K2AP48426 406 aaPredicted RBP11.72□□□□□ -0.53
CHD8-214ENST00000557727 EIF5P55010 431 aaKnown RBP11.72□□□□□ -0.53
CHD8-214ENST00000557727 HNRNPUQ00839 825 aaKnown RBP eCLIP11.72□□□□□ -0.53
CHD8-214ENST00000557727 DUSP27Q5VZP5 1158 aa11.72□□□□□ -0.53
CHD8-214ENST00000557727 COL15A1P39059 1388 aa11.71□□□□□ -0.53
CHD8-214ENST00000557727 ZBED9Q6R2W3 1325 aa11.71□□□□□ -0.53
CHD8-214ENST00000557727 SRCAPQ6ZRS2 3230 aa11.71□□□□□ -0.53
CHD8-214ENST00000557727 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.71□□□□□ -0.53
CHD8-214ENST00000557727 C2orf72A6NCS6 295 aa11.71□□□□□ -0.53
CHD8-214ENST00000557727 STARD3NLO95772 234 aa11.71□□□□□ -0.53
CHD8-214ENST00000557727 SSFA2P28290 1259 aa11.71□□□□□ -0.53
CHD8-214ENST00000557727 PROSER3Q2NL68 480 aa11.71□□□□□ -0.53
CHD8-214ENST00000557727 AK7Q96M32 723 aa11.71□□□□□ -0.53
CHD8-214ENST00000557727 TFCP2L1Q9NZI6 479 aa11.71□□□□□ -0.53
CHD8-214ENST00000557727 AFDNP55196 1824 aaKnown RBP11.71□□□□□ -0.54
CHD8-214ENST00000557727 ANKRD36CQ5JPF3 1778 aa11.71□□□□□ -0.54
CHD8-214ENST00000557727 ARFGEF2Q9Y6D5 1785 aa11.7□□□□□ -0.54
CHD8-214ENST00000557727 NRXN2Q9P2S2 1712 aa11.69□□□□□ -0.54
CHD8-214ENST00000557727 ERBB4Q15303 1308 aa11.69□□□□□ -0.54
CHD8-214ENST00000557727 E9PSI1 815 aa11.69□□□□□ -0.54
CHD8-214ENST00000557727 VAMP4O75379 141 aa11.69□□□□□ -0.54
CHD8-214ENST00000557727 HMGB2P26583 209 aaKnown RBP11.69□□□□□ -0.54
CHD8-214ENST00000557727 CANXP27824 592 aaKnown RBP11.69□□□□□ -0.54
CHD8-214ENST00000557727 IL6STP40189 918 aaPredicted RBP11.69□□□□□ -0.54
CHD8-214ENST00000557727 EXOSC9Q06265 439 aaKnown RBP11.69□□□□□ -0.54
CHD8-214ENST00000557727 ARHGEF1Q92888 912 aaKnown RBP11.69□□□□□ -0.54
CHD8-214ENST00000557727 BCL2L12Q9HB09 334 aa11.69□□□□□ -0.54
CHD8-214ENST00000557727 RTCBQ9Y3I0 505 aaKnown RBP11.69□□□□□ -0.54
CHD8-214ENST00000557727 USP42Q9H9J4 1324 aaKnown RBP11.68□□□□□ -0.54
CHD8-214ENST00000557727 KIF13BQ9NQT8 1826 aa11.68□□□□□ -0.54
CHD8-214ENST00000557727 ELL2O00472 640 aaPredicted RBP11.68□□□□□ -0.54
CHD8-214ENST00000557727 PHF14O94880 888 aa11.68□□□□□ -0.54
CHD8-214ENST00000557727 MYH16Q9H6N6 1097 aa11.68□□□□□ -0.54
CHD8-214ENST00000557727 SLC34A2O95436 690 aa11.67□□□□□ -0.54
CHD8-214ENST00000557727 ANXA1P04083 346 aa11.67□□□□□ -0.54
CHD8-214ENST00000557727 EIF2S2P20042 333 aaKnown RBP11.67□□□□□ -0.54
CHD8-214ENST00000557727 TWISTNBQ3B726 338 aaPredicted RBP11.67□□□□□ -0.54
CHD8-214ENST00000557727 TRAPPC3LQ5T215 181 aa11.67□□□□□ -0.54
CHD8-214ENST00000557727 FLAD1Q8NFF5 587 aa11.67□□□□□ -0.54
CHD8-214ENST00000557727 KHSRPQ92945 711 aaKnown RBP eCLIP11.67□□□□□ -0.54
CHD8-214ENST00000557727 CHPF2Q9P2E5 772 aa11.67□□□□□ -0.54
CHD8-214ENST00000557727 SRP68Q9UHB9 627 aaKnown RBP11.67□□□□□ -0.54
CHD8-214ENST00000557727 KIAA1551Q9HCM1 1747 aa11.66□□□□□ -0.54
CHD8-214ENST00000557727 GYS1P13807 737 aa11.66□□□□□ -0.54
CHD8-214ENST00000557727 PTGER2P43116 358 aa11.66□□□□□ -0.54
CHD8-214ENST00000557727 HDGFL1Q5TGJ6 251 aa11.66□□□□□ -0.54
CHD8-214ENST00000557727 NECTIN2Q92692 538 aa11.66□□□□□ -0.54
CHD8-214ENST00000557727 DDX21Q9NR30 783 aaKnown RBP eCLIP11.66□□□□□ -0.54
CHD8-214ENST00000557727 NARFQ9UHQ1 456 aa11.66□□□□□ -0.54
CHD8-214ENST00000557727 N4BP2Q86UW6 1770 aaPredicted RBP11.65□□□□□ -0.54
CHD8-214ENST00000557727 CAMTA2O94983 1202 aa11.65□□□□□ -0.54
CHD8-214ENST00000557727 ZBTB7AO95365 584 aa11.65□□□□□ -0.54
CHD8-214ENST00000557727 TTLL7Q6ZT98 887 aa11.65□□□□□ -0.54
CHD8-214ENST00000557727 SLC16A10Q8TF71 515 aa11.65□□□□□ -0.54
CHD8-214ENST00000557727 RNF166Q96A37 237 aaPredicted RBP11.65□□□□□ -0.54
CHD8-214ENST00000557727 ANKRD31Q8N7Z5 1873 aa11.65□□□□□ -0.54
CHD8-214ENST00000557727 MYL6BP14649 208 aa11.64□□□□□ -0.55
CHD8-214ENST00000557727 USPL1Q5W0Q7 1092 aa11.64□□□□□ -0.55
CHD8-214ENST00000557727 TMC2Q8TDI7 906 aa11.64□□□□□ -0.55
CHD8-214ENST00000557727 MTFR1LQ9H019 292 aa11.64□□□□□ -0.55
CHD8-214ENST00000557727 TBC1D2BQ9UPU7 963 aa11.64□□□□□ -0.55
CHD8-214ENST00000557727 TCERG1O14776 1098 aaKnown RBP11.63□□□□□ -0.55
CHD8-214ENST00000557727 RFC4P35249 363 aa11.63□□□□□ -0.55
CHD8-214ENST00000557727 G2E3Q7L622 706 aa11.63□□□□□ -0.55
CHD8-214ENST00000557727 PHAXQ9H814 394 aaKnown RBP11.63□□□□□ -0.55
CHD8-214ENST00000557727 DBF4Q9UBU7 674 aaPredicted RBP11.63□□□□□ -0.55
CHD8-214ENST00000557727 A0A087WZG4 1122 aa11.62□□□□□ -0.55
CHD8-214ENST00000557727 TM4SF1P30408 202 aa11.62□□□□□ -0.55
CHD8-214ENST00000557727 DDR1Q08345 913 aa11.62□□□□□ -0.55
CHD8-214ENST00000557727 HLFQ16534 295 aa11.62□□□□□ -0.55
CHD8-214ENST00000557727 CCDC30Q5VVM6 783 aa11.62□□□□□ -0.55
CHD8-214ENST00000557727 MSL1Q68DK7 614 aa11.62□□□□□ -0.55
CHD8-214ENST00000557727 DZIP3Q86Y13 1208 aaKnown RBP11.62□□□□□ -0.55
CHD8-214ENST00000557727 XAGE3Q8WTP9 111 aa11.62□□□□□ -0.55
CHD8-214ENST00000557727 MAP3K15Q6ZN16 1313 aa11.61□□□□□ -0.55
CHD8-214ENST00000557727 BRCA1P38398 1863 aaKnown RBP11.61□□□□□ -0.55
CHD8-214ENST00000557727 ATP10DQ9P241 1426 aa11.61□□□□□ -0.55
CHD8-214ENST00000557727 COPS6Q7L5N1 327 aa11.61□□□□□ -0.55
CHD8-214ENST00000557727 HYPKQ9NX55 129 aa11.61□□□□□ -0.55
CHD8-214ENST00000557727 ZNF330Q9Y3S2 320 aaPredicted RBP11.61□□□□□ -0.55
CHD8-214ENST00000557727 ADCY9O60503 1353 aa11.61□□□□□ -0.55
CHD8-214ENST00000557727 DLEC1Q9Y238 1755 aa11.61□□□□□ -0.55
CHD8-214ENST00000557727 LAMB2P55268 1798 aa11.6□□□□□ -0.55
CHD8-214ENST00000557727 ERVV-1B6SEH8 477 aa11.6□□□□□ -0.55
CHD8-214ENST00000557727 PPP1R37O75864 691 aa11.6□□□□□ -0.55
CHD8-214ENST00000557727 NFIXQ14938 502 aa11.6□□□□□ -0.55
CHD8-214ENST00000557727 TBC1D9BQ66K14 1250 aa11.6□□□□□ -0.55
CHD8-214ENST00000557727 SSH1Q8WYL5 1049 aa11.6□□□□□ -0.55
CHD8-214ENST00000557727 PCDHGA4Q9Y5G9 962 aa11.6□□□□□ -0.55
CHD8-214ENST00000557727 COL11A2P13942 1736 aaPredicted RBP11.6□□□□□ -0.55
CHD8-214ENST00000557727 DDX60Q8IY21 1712 aaKnown RBP11.6□□□□□ -0.55
CHD8-214ENST00000557727 TNRC6CQ9HCJ0 1690 aaKnown RBP11.59□□□□□ -0.55
CHD8-214ENST00000557727 POLRMTO00411 1230 aaKnown RBP11.59□□□□□ -0.55
CHD8-214ENST00000557727 ZPR1O75312 459 aa11.59□□□□□ -0.55
CHD8-214ENST00000557727 NUDT7P0C024 238 aa11.59□□□□□ -0.55
CHD8-214ENST00000557727 CT47B1P0C2W7 299 aaPredicted RBP11.59□□□□□ -0.55
CHD8-214ENST00000557727 CLEC4GQ6UXB4 293 aa11.59□□□□□ -0.55
CHD8-214ENST00000557727 NLGN1Q8N2Q7 840 aa11.59□□□□□ -0.55
CHD8-214ENST00000557727 MRPL50Q8N5N7 158 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms