RNA–Protein interactions for RNA: ENST00000557599.5

PRKCH-227, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-227ENST00000557599 ATF7IPQ6VMQ6 1270 aa13.37□□□□□ -0.27
PRKCH-227ENST00000557599 DZIP1LQ8IYY4 767 aaKnown RBP13.37□□□□□ -0.27
PRKCH-227ENST00000557599 DBF4Q9UBU7 674 aaPredicted RBP13.37□□□□□ -0.27
PRKCH-227ENST00000557599 TBC1D2BQ9UPU7 963 aa13.37□□□□□ -0.27
PRKCH-227ENST00000557599 USP16Q9Y5T5 823 aa13.37□□□□□ -0.27
PRKCH-227ENST00000557599 NUP98P52948 1817 aa13.36□□□□□ -0.27
PRKCH-227ENST00000557599 KLRG2A4D1S0 409 aaPredicted RBP13.36□□□□□ -0.27
PRKCH-227ENST00000557599 NBPF26B4DH59 902 aa13.36□□□□□ -0.27
PRKCH-227ENST00000557599 TCERG1O14776 1098 aaKnown RBP13.36□□□□□ -0.27
PRKCH-227ENST00000557599 FSTL1Q12841 308 aa13.36□□□□□ -0.27
PRKCH-227ENST00000557599 NBPF10Q6P3W6 841 aaKnown RBP13.36□□□□□ -0.27
PRKCH-227ENST00000557599 CLEC4GQ6UXB4 293 aa13.36□□□□□ -0.27
PRKCH-227ENST00000557599 C2CD5Q86YS7 1000 aa13.36□□□□□ -0.27
PRKCH-227ENST00000557599 NBPF15Q8N660 670 aa13.36□□□□□ -0.27
PRKCH-227ENST00000557599 NECTIN2Q92692 538 aa13.36□□□□□ -0.27
PRKCH-227ENST00000557599 NOB1Q9ULX3 412 aaKnown RBP13.36□□□□□ -0.27
PRKCH-227ENST00000557599 ERBB4Q15303 1308 aa13.36□□□□□ -0.27
PRKCH-227ENST00000557599 H0YIN7 160 aa13.35□□□□□ -0.27
PRKCH-227ENST00000557599 NPM2Q86SE8 214 aaKnown RBP13.35□□□□□ -0.27
PRKCH-227ENST00000557599 HYPKQ9NX55 129 aa13.35□□□□□ -0.27
PRKCH-227ENST00000557599 RIC1Q4ADV7 1423 aa13.35□□□□□ -0.27
PRKCH-227ENST00000557599 ADAMTSL1Q8N6G6 1762 aa13.35□□□□□ -0.27
PRKCH-227ENST00000557599 GLTPD2A6NH11 291 aa13.34□□□□□ -0.27
PRKCH-227ENST00000557599 DDX58O95786 925 aaKnown RBP13.34□□□□□ -0.27
PRKCH-227ENST00000557599 SRGNP10124 158 aa13.34□□□□□ -0.27
PRKCH-227ENST00000557599 PDE6BP35913 854 aa13.34□□□□□ -0.27
PRKCH-227ENST00000557599 AAMPQ13685 434 aa13.34□□□□□ -0.27
PRKCH-227ENST00000557599 DZIP3Q86Y13 1208 aaKnown RBP13.34□□□□□ -0.27
PRKCH-227ENST00000557599 POTECB2RU33 542 aa13.33□□□□□ -0.28
PRKCH-227ENST00000557599 FKBP5Q13451 457 aaPredicted RBP13.33□□□□□ -0.28
PRKCH-227ENST00000557599 IFFO2Q5TF58 517 aa13.33□□□□□ -0.28
PRKCH-227ENST00000557599 STYK1Q6J9G0 422 aa13.33□□□□□ -0.28
PRKCH-227ENST00000557599 BICDL1Q6ZP65 573 aa13.33□□□□□ -0.28
PRKCH-227ENST00000557599 C7orf43Q8WVR3 580 aa13.33□□□□□ -0.28
PRKCH-227ENST00000557599 CLUAP1Q96AJ1 413 aa13.33□□□□□ -0.28
PRKCH-227ENST00000557599 DDX21Q9NR30 783 aaKnown RBP eCLIP13.33□□□□□ -0.28
PRKCH-227ENST00000557599 CHPF2Q9P2E5 772 aa13.33□□□□□ -0.28
PRKCH-227ENST00000557599 TRIM27P14373 513 aa13.32□□□□□ -0.28
PRKCH-227ENST00000557599 FLIIQ13045 1269 aa13.32□□□□□ -0.28
PRKCH-227ENST00000557599 ITPRIPQ8IWB1 547 aa13.32□□□□□ -0.28
PRKCH-227ENST00000557599 JMYQ8N9B5 988 aa13.32□□□□□ -0.28
PRKCH-227ENST00000557599 CNBD1Q8NA66 436 aa13.32□□□□□ -0.28
PRKCH-227ENST00000557599 DDX19BQ9UMR2 479 aa13.32□□□□□ -0.28
PRKCH-227ENST00000557599 ANKRD36CQ5JPF3 1778 aa13.32□□□□□ -0.28
PRKCH-227ENST00000557599 SCN4AP35499 1836 aa13.32□□□□□ -0.28
PRKCH-227ENST00000557599 IBTKQ9P2D0 1353 aaPredicted RBP13.32□□□□□ -0.28
PRKCH-227ENST00000557599 PIP4K2AP48426 406 aaPredicted RBP13.31□□□□□ -0.28
PRKCH-227ENST00000557599 PANK1Q8TE04 598 aa13.31□□□□□ -0.28
PRKCH-227ENST00000557599 CRBNQ96SW2 442 aa13.31□□□□□ -0.28
PRKCH-227ENST00000557599 SETDB2Q96T68 719 aa13.31□□□□□ -0.28
PRKCH-227ENST00000557599 RRAGCQ9HB90 399 aa13.31□□□□□ -0.28
PRKCH-227ENST00000557599 PPP4R2Q9NY27 417 aa13.31□□□□□ -0.28
PRKCH-227ENST00000557599 MVPQ14764 893 aaKnown RBP13.3□□□□□ -0.28
PRKCH-227ENST00000557599 PRPF40BQ6NWY9 871 aaKnown RBP13.3□□□□□ -0.28
PRKCH-227ENST00000557599 CCDC24Q8N4L8 307 aa13.3□□□□□ -0.28
PRKCH-227ENST00000557599 COG6Q9Y2V7 657 aa13.3□□□□□ -0.28
PRKCH-227ENST00000557599 C21orf2O43822 256 aa13.29□□□□□ -0.28
PRKCH-227ENST00000557599 CCT4P50991 539 aaKnown RBP13.29□□□□□ -0.28
PRKCH-227ENST00000557599 LRP10Q7Z4F1 713 aa13.29□□□□□ -0.28
PRKCH-227ENST00000557599 EXOC6Q8TAG9 804 aa13.29□□□□□ -0.28
PRKCH-227ENST00000557599 KLRG1Q96E93 195 aa13.29□□□□□ -0.28
PRKCH-227ENST00000557599 MASTLQ96GX5 879 aa13.29□□□□□ -0.28
PRKCH-227ENST00000557599 MYL6BP14649 208 aa13.28□□□□□ -0.28
PRKCH-227ENST00000557599 VEGFAP15692 232 aaPredicted RBP13.28□□□□□ -0.28
PRKCH-227ENST00000557599 ST5P78524 1137 aa13.28□□□□□ -0.28
PRKCH-227ENST00000557599 CRY2Q49AN0 593 aa13.28□□□□□ -0.28
PRKCH-227ENST00000557599 C20orf194Q5TEA3 1177 aa13.28□□□□□ -0.28
PRKCH-227ENST00000557599 SLC4A10Q6U841 1118 aa13.28□□□□□ -0.28
PRKCH-227ENST00000557599 SMC1BQ8NDV3 1235 aa13.28□□□□□ -0.28
PRKCH-227ENST00000557599 CNKSR1Q969H4 720 aa13.28□□□□□ -0.28
PRKCH-227ENST00000557599 ZNF652Q9Y2D9 606 aa13.28□□□□□ -0.28
PRKCH-227ENST00000557599 ZNF330Q9Y3S2 320 aaPredicted RBP13.28□□□□□ -0.28
PRKCH-227ENST00000557599 ABCC4O15439 1325 aa13.28□□□□□ -0.28
PRKCH-227ENST00000557599 ABCC12Q96J65 1359 aa13.28□□□□□ -0.28
PRKCH-227ENST00000557599 COL4A5P29400 1685 aa13.28□□□□□ -0.28
PRKCH-227ENST00000557599 LAMB2P55268 1798 aa13.27□□□□□ -0.28
PRKCH-227ENST00000557599 ERVV-1B6SEH8 477 aa13.27□□□□□ -0.29
PRKCH-227ENST00000557599 NEXNQ0ZGT2 675 aa13.27□□□□□ -0.29
PRKCH-227ENST00000557599 HLFQ16534 295 aa13.27□□□□□ -0.29
PRKCH-227ENST00000557599 SOGA3Q5TF21 947 aa13.27□□□□□ -0.29
PRKCH-227ENST00000557599 ZNF622Q969S3 477 aaKnown RBP eCLIP13.27□□□□□ -0.29
PRKCH-227ENST00000557599 CCDC136Q96JN2 1154 aa13.27□□□□□ -0.29
PRKCH-227ENST00000557599 TAOK3Q9H2K8 898 aa13.27□□□□□ -0.29
PRKCH-227ENST00000557599 NPR1P16066 1061 aa13.26□□□□□ -0.29
PRKCH-227ENST00000557599 HTRA3P83110 453 aa13.26□□□□□ -0.29
PRKCH-227ENST00000557599 AIMP1Q12904 312 aaKnown RBP13.26□□□□□ -0.29
PRKCH-227ENST00000557599 KIF6Q6ZMV9 814 aa13.26□□□□□ -0.29
PRKCH-227ENST00000557599 G2E3Q7L622 706 aa13.26□□□□□ -0.29
PRKCH-227ENST00000557599 RIC3Q7Z5B4 369 aa13.26□□□□□ -0.29
PRKCH-227ENST00000557599 C16orf71Q8IYS4 520 aaPredicted RBP13.26□□□□□ -0.29
PRKCH-227ENST00000557599 TMEM57Q8N5G2 664 aa13.26□□□□□ -0.29
PRKCH-227ENST00000557599 DNAAF4Q8WXU2 420 aa13.26□□□□□ -0.29
PRKCH-227ENST00000557599 PHAXQ9H814 394 aaKnown RBP13.26□□□□□ -0.29
PRKCH-227ENST00000557599 HDAC5Q9UQL6 1122 aa13.26□□□□□ -0.29
PRKCH-227ENST00000557599 LTBP1Q14766 1721 aa13.25□□□□□ -0.29
PRKCH-227ENST00000557599 UBN2Q6ZU65 1347 aa13.25□□□□□ -0.29
PRKCH-227ENST00000557599 ANXA1P04083 346 aa13.25□□□□□ -0.29
PRKCH-227ENST00000557599 RLBP1P12271 317 aa13.25□□□□□ -0.29
PRKCH-227ENST00000557599 ERFEQ4G0M1 354 aa13.25□□□□□ -0.29
PRKCH-227ENST00000557599 INTS3Q68E01 1043 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms