RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 BTLAQ7Z6A9 289 aa9.09□□□□□ -0.95
VRK1-207ENST00000557352 ELOA3Q8NG57 546 aa9.09□□□□□ -0.95
VRK1-207ENST00000557352 C1QTNF9BB2RNN3 333 aa9.08□□□□□ -0.96
VRK1-207ENST00000557352 WEE1P30291 646 aa9.08□□□□□ -0.96
VRK1-207ENST00000557352 HIF1AQ16665 826 aa9.08□□□□□ -0.96
VRK1-207ENST00000557352 RAB44Q7Z6P3 723 aaPredicted RBP9.08□□□□□ -0.96
VRK1-207ENST00000557352 CD163Q86VB7 1156 aa9.08□□□□□ -0.96
VRK1-207ENST00000557352 FAM200AQ8TCP9 573 aa9.08□□□□□ -0.96
VRK1-207ENST00000557352 TRIM11Q96F44 468 aa9.08□□□□□ -0.96
VRK1-207ENST00000557352 NOP53Q9NZM5 478 aaKnown RBP9.08□□□□□ -0.96
VRK1-207ENST00000557352 ADARB2-AS1A8MUL3 147 aa9.07□□□□□ -0.96
VRK1-207ENST00000557352 ALAS2P22557 587 aa9.07□□□□□ -0.96
VRK1-207ENST00000557352 TNFRSF25Q93038 417 aa9.07□□□□□ -0.96
VRK1-207ENST00000557352 BCS1LQ9Y276 419 aa9.07□□□□□ -0.96
VRK1-207ENST00000557352 IER5Q5VY09 327 aa9.06□□□□□ -0.96
VRK1-207ENST00000557352 ZMYND15Q9H091 742 aa9.06□□□□□ -0.96
VRK1-207ENST00000557352 NOVA2Q9UNW9 492 aaKnown RBP9.06□□□□□ -0.96
VRK1-207ENST00000557352 TGFBR3LH3BV60 316 aa9.05□□□□□ -0.96
VRK1-207ENST00000557352 FOXO3O43524 673 aa9.05□□□□□ -0.96
VRK1-207ENST00000557352 CHRNA4P43681 627 aa9.05□□□□□ -0.96
VRK1-207ENST00000557352 NEUROD1Q13562 356 aa9.05□□□□□ -0.96
VRK1-207ENST00000557352 DMGDHQ9UI17 866 aaKnown RBP9.05□□□□□ -0.96
VRK1-207ENST00000557352 PLVAPQ9BX97 442 aa9.04□□□□□ -0.96
VRK1-207ENST00000557352 K7ELQ4 463 aaPredicted RBP9.03□□□□□ -0.96
VRK1-207ENST00000557352 BHMTQ93088 406 aa9.03□□□□□ -0.96
VRK1-207ENST00000557352 QTRT2Q9H974 415 aaKnown RBP9.03□□□□□ -0.96
VRK1-207ENST00000557352 KLK14Q9P0G3 267 aa9.03□□□□□ -0.96
VRK1-207ENST00000557352 STARD13Q9Y3M8 1113 aa9.03□□□□□ -0.96
VRK1-207ENST00000557352 FURINP09958 794 aa9.02□□□□□ -0.97
VRK1-207ENST00000557352 ADH7P40394 386 aa9.02□□□□□ -0.97
VRK1-207ENST00000557352 SRPK2P78362 688 aaKnown RBP9.02□□□□□ -0.97
VRK1-207ENST00000557352 COL9A3Q14050 684 aaPredicted RBP9.02□□□□□ -0.97
VRK1-207ENST00000557352 VTI1AQ96AJ9 217 aa9.02□□□□□ -0.97
VRK1-207ENST00000557352 ZMIZ1Q9ULJ6 1067 aa9.02□□□□□ -0.97
VRK1-207ENST00000557352 DGKZQ13574 1117 aa9.01□□□□□ -0.97
VRK1-207ENST00000557352 ELOAQ14241 798 aaKnown RBP9.01□□□□□ -0.97
VRK1-207ENST00000557352 GSX2Q9BZM3 304 aa9.01□□□□□ -0.97
VRK1-207ENST00000557352 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9□□□□□ -0.97
VRK1-207ENST00000557352 SWI5Q1ZZU3 235 aa9□□□□□ -0.97
VRK1-207ENST00000557352 MYO19Q96H55 970 aa9□□□□□ -0.97
VRK1-207ENST00000557352 ACIN1Q9UKV3 1341 aaKnown RBP9□□□□□ -0.97
VRK1-207ENST00000557352 M0R082 166 aa8.99□□□□□ -0.97
VRK1-207ENST00000557352 ALBP02768 609 aa8.99□□□□□ -0.97
VRK1-207ENST00000557352 GRNP28799 593 aaKnown RBP8.99□□□□□ -0.97
VRK1-207ENST00000557352 INPP5BP32019 993 aa8.99□□□□□ -0.97
VRK1-207ENST00000557352 IDH3AP50213 366 aa8.99□□□□□ -0.97
VRK1-207ENST00000557352 ZNF417Q8TAU3 575 aa8.99□□□□□ -0.97
VRK1-207ENST00000557352 PRIMPOLQ96LW4 560 aa8.99□□□□□ -0.97
VRK1-207ENST00000557352 ZNF587Q96SQ5 575 aaPredicted RBP8.99□□□□□ -0.97
VRK1-207ENST00000557352 EFCC1Q9HA90 598 aa8.99□□□□□ -0.97
VRK1-207ENST00000557352 SPATA31C1P0DKV0 1188 aa8.98□□□□□ -0.97
VRK1-207ENST00000557352 FAM69CQ0P6D2 419 aa8.98□□□□□ -0.97
VRK1-207ENST00000557352 FKBP5Q13451 457 aaPredicted RBP8.98□□□□□ -0.97
VRK1-207ENST00000557352 CCINQ13939 588 aa8.98□□□□□ -0.97
VRK1-207ENST00000557352 C11orf91Q3C1V1 193 aa8.98□□□□□ -0.97
VRK1-207ENST00000557352 C8orf86Q6ZUL3 223 aa8.98□□□□□ -0.97
VRK1-207ENST00000557352 MICALL1Q8N3F8 863 aa8.98□□□□□ -0.97
VRK1-207ENST00000557352 STK32AQ8WU08 396 aa8.98□□□□□ -0.97
VRK1-207ENST00000557352 PRDM6Q9NQX0 595 aa8.98□□□□□ -0.97
VRK1-207ENST00000557352 LRFN2Q9ULH4 789 aa8.98□□□□□ -0.97
VRK1-207ENST00000557352 PRMT3O60678 531 aa8.97□□□□□ -0.97
VRK1-207ENST00000557352 MICAL2O94851 1124 aa8.97□□□□□ -0.97
VRK1-207ENST00000557352 EPB42P16452 691 aa8.97□□□□□ -0.97
VRK1-207ENST00000557352 TBC1D8BQ0IIM8 1120 aa8.97□□□□□ -0.97
VRK1-207ENST00000557352 C20orf204Q6ZNR8 217 aa8.97□□□□□ -0.97
VRK1-207ENST00000557352 UBE2OQ9C0C9 1292 aaKnown RBP8.97□□□□□ -0.97
VRK1-207ENST00000557352 IGFLR1Q9H665 355 aa8.97□□□□□ -0.97
VRK1-207ENST00000557352 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.97□□□□□ -0.973e-7■■□□□ 14.4
VRK1-207ENST00000557352 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.97□□□□□ -0.97
VRK1-207ENST00000557352 ATG7O95352 703 aa8.96□□□□□ -0.98
VRK1-207ENST00000557352 NFKB1P19838 968 aa8.96□□□□□ -0.98
VRK1-207ENST00000557352 OCLNQ16625 522 aa8.96□□□□□ -0.98
VRK1-207ENST00000557352 PNMA5Q96PV4 448 aa8.96□□□□□ -0.98
VRK1-207ENST00000557352 GTF3C3Q9Y5Q9 886 aa8.96□□□□□ -0.98
VRK1-207ENST00000557352 ARSDP51689 593 aa8.95□□□□□ -0.98
VRK1-207ENST00000557352 COX20Q5RI15 118 aa8.95□□□□□ -0.98
VRK1-207ENST00000557352 IFT43Q96FT9 208 aa8.95□□□□□ -0.98
VRK1-207ENST00000557352 SLC6A14Q9UN76 642 aa8.95□□□□□ -0.98
VRK1-207ENST00000557352 SPDYE3A6NKU9 549 aa8.94□□□□□ -0.98
VRK1-207ENST00000557352 NID1P14543 1247 aa8.94□□□□□ -0.98
VRK1-207ENST00000557352 DNAJB12Q9NXW2 375 aaKnown RBP8.94□□□□□ -0.98
VRK1-207ENST00000557352 FAM229AH3BQW9 127 aa8.93□□□□□ -0.98
VRK1-207ENST00000557352 OPLAHO14841 1288 aa8.93□□□□□ -0.98
VRK1-207ENST00000557352 ITGB7P26010 798 aa8.93□□□□□ -0.98
VRK1-207ENST00000557352 DOC2BQ14184 412 aa8.93□□□□□ -0.98
VRK1-207ENST00000557352 XP32Q5T750 250 aa8.93□□□□□ -0.98
VRK1-207ENST00000557352 TMEM164Q5U3C3 297 aa8.93□□□□□ -0.98
VRK1-207ENST00000557352 CCDC97Q96F63 343 aaPredicted RBP8.93□□□□□ -0.98
VRK1-207ENST00000557352 C11orf16Q9NQ32 467 aa8.93□□□□□ -0.98
VRK1-207ENST00000557352 GATA4P43694 442 aa8.92□□□□□ -0.98
VRK1-207ENST00000557352 PRRT3Q5FWE3 981 aa8.92□□□□□ -0.98
VRK1-207ENST00000557352 PBXIP1Q96AQ6 731 aa8.92□□□□□ -0.98
VRK1-207ENST00000557352 ZFATQ9P243 1243 aa8.92□□□□□ -0.98
VRK1-207ENST00000557352 SERPINA10Q9UK55 444 aa8.92□□□□□ -0.98
VRK1-207ENST00000557352 ARID3CA6NKF2 412 aa8.91□□□□□ -0.98
VRK1-207ENST00000557352 LILRB5O75023 590 aa8.91□□□□□ -0.98
VRK1-207ENST00000557352 MAP3K6O95382 1288 aa8.91□□□□□ -0.98
VRK1-207ENST00000557352 TARSP26639 723 aaKnown RBP8.91□□□□□ -0.98
VRK1-207ENST00000557352 KRT25Q7Z3Z0 450 aa8.91□□□□□ -0.98
VRK1-207ENST00000557352 TREML1Q86YW5 311 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms