RNA–Protein interactions for RNA: ENST00000557349.5

TVP23C-CDRT4-204, Transcript of TVP23C-CDRT4 readthrough, humanhuman

TSL 2

Gene TVP23C-CDRT4, Length 1,005 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-CDRT4-204ENST00000557349 SLFN5Q08AF3 891 aa21.43■■□□□ 1.02
TVP23C-CDRT4-204ENST00000557349 RIC1Q4ADV7 1423 aa21.43■■□□□ 1.02
TVP23C-CDRT4-204ENST00000557349 SRGNP10124 158 aa21.42■■□□□ 1.02
TVP23C-CDRT4-204ENST00000557349 HNRNPUQ00839 825 aaKnown RBP eCLIP21.42■■□□□ 1.02
TVP23C-CDRT4-204ENST00000557349 STYK1Q6J9G0 422 aa21.42■■□□□ 1.02
TVP23C-CDRT4-204ENST00000557349 ZNF428Q96B54 188 aa21.42■■□□□ 1.02
TVP23C-CDRT4-204ENST00000557349 CDCA7LQ96GN5 454 aa21.42■■□□□ 1.02
TVP23C-CDRT4-204ENST00000557349 MASTLQ96GX5 879 aa21.42■■□□□ 1.02
TVP23C-CDRT4-204ENST00000557349 MYD88Q99836 296 aa21.42■■□□□ 1.02
TVP23C-CDRT4-204ENST00000557349 TRMT112Q9UI30 125 aaKnown RBP21.42■■□□□ 1.02
TVP23C-CDRT4-204ENST00000557349 NPR1P16066 1061 aa21.41■■□□□ 1.02
TVP23C-CDRT4-204ENST00000557349 FLIIQ13045 1269 aa21.41■■□□□ 1.02
TVP23C-CDRT4-204ENST00000557349 ARHGAP27Q6ZUM4 889 aa21.41■■□□□ 1.02
TVP23C-CDRT4-204ENST00000557349 G2E3Q7L622 706 aa21.41■■□□□ 1.02
TVP23C-CDRT4-204ENST00000557349 ISCA1Q9BUE6 129 aa21.41■■□□□ 1.02
TVP23C-CDRT4-204ENST00000557349 MAP3K2Q9Y2U5 619 aa21.41■■□□□ 1.02
TVP23C-CDRT4-204ENST00000557349 SH3TC1Q8TE82 1336 aa21.4■■□□□ 1.02
TVP23C-CDRT4-204ENST00000557349 PI4KAP2A4QPH2 592 aa21.4■■□□□ 1.02
TVP23C-CDRT4-204ENST00000557349 FKBP5Q13451 457 aaPredicted RBP21.4■■□□□ 1.02
TVP23C-CDRT4-204ENST00000557349 KSR2Q6VAB6 950 aa21.4■■□□□ 1.02
TVP23C-CDRT4-204ENST00000557349 PI4KAP1Q8N8J0 262 aa21.4■■□□□ 1.02
TVP23C-CDRT4-204ENST00000557349 CNKSR1Q969H4 720 aa21.4■■□□□ 1.02
TVP23C-CDRT4-204ENST00000557349 UTRNP46939 3433 aa21.4■■□□□ 1.02
TVP23C-CDRT4-204ENST00000557349 CACNA1SQ13698 1873 aa21.39■■□□□ 1.02
TVP23C-CDRT4-204ENST00000557349 KLRG2A4D1S0 409 aaPredicted RBP21.39■■□□□ 1.01
TVP23C-CDRT4-204ENST00000557349 RPGRQ92834 1020 aaKnown RBP21.39■■□□□ 1.01
TVP23C-CDRT4-204ENST00000557349 METTL22Q9BUU2 404 aaPredicted RBP21.39■■□□□ 1.01
TVP23C-CDRT4-204ENST00000557349 ADCY9O60503 1353 aa21.38■■□□□ 1.01
TVP23C-CDRT4-204ENST00000557349 NEXNQ0ZGT2 675 aa21.38■■□□□ 1.01
TVP23C-CDRT4-204ENST00000557349 PRPF40BQ6NWY9 871 aaKnown RBP21.38■■□□□ 1.01
TVP23C-CDRT4-204ENST00000557349 ZNF219Q9P2Y4 722 aaPredicted RBP21.38■■□□□ 1.01
TVP23C-CDRT4-204ENST00000557349 CACNA1FO60840 1977 aa21.37■■□□□ 1.01
TVP23C-CDRT4-204ENST00000557349 CRY2Q49AN0 593 aa21.37■■□□□ 1.01
TVP23C-CDRT4-204ENST00000557349 NLRP3Q96P20 1036 aa21.37■■□□□ 1.01
TVP23C-CDRT4-204ENST00000557349 TRIM28Q13263 835 aaKnown RBP21.36■■□□□ 1.01
TVP23C-CDRT4-204ENST00000557349 C21orf2O43822 256 aa21.35■■□□□ 1.01
TVP23C-CDRT4-204ENST00000557349 HCLS1P14317 486 aaPredicted RBP21.35■■□□□ 1.01
TVP23C-CDRT4-204ENST00000557349 RTL5Q5HYW3 569 aaPredicted RBP21.35■■□□□ 1.01
TVP23C-CDRT4-204ENST00000557349 SYNE4Q8N205 404 aa21.35■■□□□ 1.01
TVP23C-CDRT4-204ENST00000557349 CCDC191Q8NCU4 936 aa21.35■■□□□ 1.01
TVP23C-CDRT4-204ENST00000557349 FAM89AQ96GI7 184 aa21.35■■□□□ 1.01
TVP23C-CDRT4-204ENST00000557349 CWC25Q9NXE8 425 aaPredicted RBP21.35■■□□□ 1.01
TVP23C-CDRT4-204ENST00000557349 ALDH1B1P30837 517 aa21.34■■□□□ 1.01
TVP23C-CDRT4-204ENST00000557349 SLC10A5Q5PT55 438 aa21.34■■□□□ 1.01
TVP23C-CDRT4-204ENST00000557349 C3orf67Q6ZVT6 689 aa21.34■■□□□ 1.01
TVP23C-CDRT4-204ENST00000557349 SLX4Q8IY92 1834 aa21.34■■□□□ 1.01
TVP23C-CDRT4-204ENST00000557349 TRMT2AQ8IZ69 625 aaKnown RBP21.33■■□□□ 1.01
TVP23C-CDRT4-204ENST00000557349 DNAAF4Q8WXU2 420 aa21.33■■□□□ 1.01
TVP23C-CDRT4-204ENST00000557349 RBM17Q96I25 401 aaKnown RBP21.33■■□□□ 1.01
TVP23C-CDRT4-204ENST00000557349 DDX60Q8IY21 1712 aaKnown RBP21.32■■□□□ 1
TVP23C-CDRT4-204ENST00000557349 SOGA3Q5TF21 947 aa21.32■■□□□ 1
TVP23C-CDRT4-204ENST00000557349 ZBTB38Q8NAP3 1195 aaPredicted RBP21.32■■□□□ 1
TVP23C-CDRT4-204ENST00000557349 LAMB2P55268 1798 aa21.32■■□□□ 1
TVP23C-CDRT4-204ENST00000557349 IRS4O14654 1257 aaPredicted RBP21.31■■□□□ 1
TVP23C-CDRT4-204ENST00000557349 RASSF7Q02833 373 aa21.31■■□□□ 1
TVP23C-CDRT4-204ENST00000557349 CWF19L2Q2TBE0 894 aaKnown RBP21.31■■□□□ 1
TVP23C-CDRT4-204ENST00000557349 NEURL1BA8MQ27 555 aa21.3■■□□□ 1
TVP23C-CDRT4-204ENST00000557349 PCCAP05165 728 aaPredicted RBP21.3■■□□□ 1
TVP23C-CDRT4-204ENST00000557349 IGKV5-2P06315 115 aa21.3■■□□□ 1
TVP23C-CDRT4-204ENST00000557349 CT47B1P0C2W7 299 aaPredicted RBP21.3■■□□□ 1
TVP23C-CDRT4-204ENST00000557349 HSP90B1P14625 803 aaKnown RBP21.3■■□□□ 1
TVP23C-CDRT4-204ENST00000557349 HOXA10P31260 410 aaPredicted RBP21.3■■□□□ 1
TVP23C-CDRT4-204ENST00000557349 BCL2L13Q9BXK5 485 aa21.3■■□□□ 1
TVP23C-CDRT4-204ENST00000557349 CCDC93Q567U6 631 aa21.29■■□□□ 1
TVP23C-CDRT4-204ENST00000557349 SSH1Q8WYL5 1049 aa21.29■■□□□ 1
TVP23C-CDRT4-204ENST00000557349 CRAMP1Q96RY5 1269 aa21.29■■□□□ 1
TVP23C-CDRT4-204ENST00000557349 SMC4Q9NTJ3 1288 aa21.29■■□□□ 1
TVP23C-CDRT4-204ENST00000557349 ZBED9Q6R2W3 1325 aa21.29■■□□□ 1
TVP23C-CDRT4-204ENST00000557349 F6X3S4 739 aa21.28■■□□□ 1
TVP23C-CDRT4-204ENST00000557349 NFKBIEO00221 500 aa21.28■■□□□ 1
TVP23C-CDRT4-204ENST00000557349 C9orf131Q5VYM1 1079 aa21.28■■□□□ 1
TVP23C-CDRT4-204ENST00000557349 DDX46Q7L014 1031 aaKnown RBP21.28■■□□□ 1
TVP23C-CDRT4-204ENST00000557349 MRPL50Q8N5N7 158 aaKnown RBP21.28■■□□□ 1
TVP23C-CDRT4-204ENST00000557349 LINS1Q8NG48 757 aa21.28■■□□□ 1
TVP23C-CDRT4-204ENST00000557349 RNF181Q9P0P0 153 aa21.28■■□□□ 1
TVP23C-CDRT4-204ENST00000557349 PPEF1O14829 653 aaPredicted RBP21.27■■□□□ 1
TVP23C-CDRT4-204ENST00000557349 ALDH1L2Q3SY69 923 aa21.27■■□□□ 1
TVP23C-CDRT4-204ENST00000557349 JARID2Q92833 1246 aaPredicted RBP21.27■■□□□ 1
TVP23C-CDRT4-204ENST00000557349 TAOK3Q9H2K8 898 aa21.27■■□□□ 1
TVP23C-CDRT4-204ENST00000557349 ABCC4O15439 1325 aa21.27■□□□□ 0.99
TVP23C-CDRT4-204ENST00000557349 ZNF784Q8NCA9 323 aaPredicted RBP21.26■□□□□ 0.99
TVP23C-CDRT4-204ENST00000557349 FER1L6Q2WGJ9 1857 aa21.26■□□□□ 0.99
TVP23C-CDRT4-204ENST00000557349 CDHR2Q9BYE9 1310 aa21.26■□□□□ 0.99
TVP23C-CDRT4-204ENST00000557349 LMNB1P20700 586 aa21.25■□□□□ 0.99
TVP23C-CDRT4-204ENST00000557349 SLC4A10Q6U841 1118 aa21.25■□□□□ 0.99
TVP23C-CDRT4-204ENST00000557349 OLFM4Q6UX06 510 aa21.25■□□□□ 0.99
TVP23C-CDRT4-204ENST00000557349 C7orf43Q8WVR3 580 aa21.25■□□□□ 0.99
TVP23C-CDRT4-204ENST00000557349 TMX4Q9H1E5 349 aaPredicted RBP21.25■□□□□ 0.99
TVP23C-CDRT4-204ENST00000557349 PTPRCP08575 1304 aa21.25■□□□□ 0.99
TVP23C-CDRT4-204ENST00000557349 PDE8AO60658 829 aa21.24■□□□□ 0.99
TVP23C-CDRT4-204ENST00000557349 GCKRQ14397 625 aa21.24■□□□□ 0.99
TVP23C-CDRT4-204ENST00000557349 SF3B3Q15393 1217 aaKnown RBP21.24■□□□□ 0.99
TVP23C-CDRT4-204ENST00000557349 UBE3BQ7Z3V4 1068 aa21.24■□□□□ 0.99
TVP23C-CDRT4-204ENST00000557349 LTBP3Q9NS15 1303 aa21.24■□□□□ 0.99
TVP23C-CDRT4-204ENST00000557349 GRAPQ13588 217 aa21.23■□□□□ 0.99
TVP23C-CDRT4-204ENST00000557349 BEND3Q5T5X7 828 aa21.23■□□□□ 0.99
TVP23C-CDRT4-204ENST00000557349 RTKN2Q8IZC4 609 aa21.23■□□□□ 0.99
TVP23C-CDRT4-204ENST00000557349 GRAPLQ8TC17 118 aaPredicted RBP21.23■□□□□ 0.99
TVP23C-CDRT4-204ENST00000557349 SBF1O95248 1867 aa21.22■□□□□ 0.99
TVP23C-CDRT4-204ENST00000557349 TIAM2Q8IVF5 1701 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms