RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 K7ELQ4 463 aaPredicted RBP7.13□□□□□ -1.27
CHD8-212ENST00000557329 KHNYNO15037 678 aaKnown RBP7.13□□□□□ -1.27
CHD8-212ENST00000557329 EFSO43281 561 aa7.13□□□□□ -1.27
CHD8-212ENST00000557329 ARAFP10398 606 aa7.13□□□□□ -1.27
CHD8-212ENST00000557329 MAPTP10636 758 aaKnown RBP7.13□□□□□ -1.27
CHD8-212ENST00000557329 OCLNQ16625 522 aa7.13□□□□□ -1.27
CHD8-212ENST00000557329 LRRC69Q6ZNQ3 347 aa7.13□□□□□ -1.27
CHD8-212ENST00000557329 ALYREFQ86V81 257 aaKnown RBP7.13□□□□□ -1.27
CHD8-212ENST00000557329 ATP2B4P23634 1241 aa7.12□□□□□ -1.27
CHD8-212ENST00000557329 ABHD17AQ96GS6 310 aa7.12□□□□□ -1.27
CHD8-212ENST00000557329 NGLY1Q96IV0 654 aa7.12□□□□□ -1.27
CHD8-212ENST00000557329 CEP63Q96MT8 703 aa7.12□□□□□ -1.27
CHD8-212ENST00000557329 PIK3R2O00459 728 aa7.11□□□□□ -1.27
CHD8-212ENST00000557329 PRMT3O60678 531 aa7.11□□□□□ -1.27
CHD8-212ENST00000557329 THBS1P07996 1170 aa7.11□□□□□ -1.27
CHD8-212ENST00000557329 BRD2P25440 801 aaKnown RBP7.11□□□□□ -1.27
CHD8-212ENST00000557329 C16orf46Q6P387 395 aa7.11□□□□□ -1.27
CHD8-212ENST00000557329 OXCT2Q9BYC2 517 aaPredicted RBP7.11□□□□□ -1.27
CHD8-212ENST00000557329 PRR12Q9ULL5 1215 aa7.11□□□□□ -1.27
CHD8-212ENST00000557329 FKBP5Q13451 457 aaPredicted RBP7.1□□□□□ -1.27
CHD8-212ENST00000557329 SH3PXD2AQ5TCZ1 1133 aa7.1□□□□□ -1.27
CHD8-212ENST00000557329 BTLAQ7Z6A9 289 aa7.1□□□□□ -1.27
CHD8-212ENST00000557329 PRIMPOLQ96LW4 560 aa7.1□□□□□ -1.27
CHD8-212ENST00000557329 BRD7Q9NPI1 651 aa7.1□□□□□ -1.27
CHD8-212ENST00000557329 KCNH4Q9UQ05 1017 aa7.1□□□□□ -1.27
CHD8-212ENST00000557329 DCDC2BA2VCK2 349 aa7.09□□□□□ -1.27
CHD8-212ENST00000557329 KRBA1A5PL33 1030 aa7.09□□□□□ -1.27
CHD8-212ENST00000557329 TMEM88BA6NKF7 163 aa7.09□□□□□ -1.27
CHD8-212ENST00000557329 ADH6P28332 368 aa7.09□□□□□ -1.27
CHD8-212ENST00000557329 BAG6P46379 1132 aa7.09□□□□□ -1.27
CHD8-212ENST00000557329 PCSK7Q16549 785 aa7.09□□□□□ -1.27
CHD8-212ENST00000557329 ABTB2Q8N961 1025 aa7.09□□□□□ -1.27
CHD8-212ENST00000557329 KLRG1Q96E93 195 aa7.09□□□□□ -1.27
CHD8-212ENST00000557329 MKL2Q9ULH7 1088 aa7.09□□□□□ -1.27
CHD8-212ENST00000557329 RPLP1P05386 114 aaKnown RBP7.08□□□□□ -1.28
CHD8-212ENST00000557329 ARID4AP29374 1257 aaPredicted RBP7.08□□□□□ -1.28
CHD8-212ENST00000557329 ARSDP51689 593 aa7.08□□□□□ -1.28
CHD8-212ENST00000557329 SNRPNP63162 240 aaKnown RBP7.08□□□□□ -1.28
CHD8-212ENST00000557329 TYRO3Q06418 890 aa7.08□□□□□ -1.28
CHD8-212ENST00000557329 DGKZQ13574 1117 aa7.08□□□□□ -1.28
CHD8-212ENST00000557329 ZNF468Q5VIY5 522 aaPredicted RBP7.08□□□□□ -1.28
CHD8-212ENST00000557329 SLCO4C1Q6ZQN7 724 aa7.08□□□□□ -1.28
CHD8-212ENST00000557329 ARID3AQ99856 593 aa7.08□□□□□ -1.28
CHD8-212ENST00000557329 QTRT2Q9H974 415 aaKnown RBP7.08□□□□□ -1.28
CHD8-212ENST00000557329 SSFA2P28290 1259 aa7.07□□□□□ -1.28
CHD8-212ENST00000557329 IFT43Q96FT9 208 aa7.07□□□□□ -1.28
CHD8-212ENST00000557329 KRTAP4-8Q9BYQ9 185 aa7.07□□□□□ -1.28
CHD8-212ENST00000557329 NESP48681 1621 aa7.06□□□□□ -1.28
CHD8-212ENST00000557329 SIN3BO75182 1162 aa7.06□□□□□ -1.28
CHD8-212ENST00000557329 ALAS2P22557 587 aa7.06□□□□□ -1.28
CHD8-212ENST00000557329 CTBSQ01459 385 aa7.06□□□□□ -1.28
CHD8-212ENST00000557329 SHISA8B8ZZ34 492 aa7.05□□□□□ -1.28
CHD8-212ENST00000557329 MICAL2O94851 1124 aa7.05□□□□□ -1.28
CHD8-212ENST00000557329 CD33P20138 364 aa7.05□□□□□ -1.28
CHD8-212ENST00000557329 COX20Q5RI15 118 aa7.05□□□□□ -1.28
CHD8-212ENST00000557329 ALKBH2Q6NS38 261 aa7.05□□□□□ -1.28
CHD8-212ENST00000557329 Q8N3U1 123 aa7.05□□□□□ -1.28
CHD8-212ENST00000557329 HSH2DQ96JZ2 352 aa7.05□□□□□ -1.28
CHD8-212ENST00000557329 PNMA5Q96PV4 448 aa7.05□□□□□ -1.28
CHD8-212ENST00000557329 STIM2Q9P246 746 aa7.05□□□□□ -1.28
CHD8-212ENST00000557329 DMGDHQ9UI17 866 aaKnown RBP7.05□□□□□ -1.28
CHD8-212ENST00000557329 FNDC3AQ9Y2H6 1198 aaKnown RBP7.05□□□□□ -1.28
CHD8-212ENST00000557329 PCSK2P16519 638 aa7.04□□□□□ -1.28
CHD8-212ENST00000557329 COL8A1P27658 744 aa7.04□□□□□ -1.28
CHD8-212ENST00000557329 INPP5BP32019 993 aa7.04□□□□□ -1.28
CHD8-212ENST00000557329 IDH3AP50213 366 aa7.04□□□□□ -1.28
CHD8-212ENST00000557329 SPEM2Q0P670 501 aa7.04□□□□□ -1.28
CHD8-212ENST00000557329 SF3B2Q13435 895 aaKnown RBP7.04□□□□□ -1.28
CHD8-212ENST00000557329 CCINQ13939 588 aa7.04□□□□□ -1.28
CHD8-212ENST00000557329 ZNF280CQ8ND82 737 aa7.04□□□□□ -1.28
CHD8-212ENST00000557329 EDARADDQ8WWZ3 215 aa7.04□□□□□ -1.28
CHD8-212ENST00000557329 PATL2C9JE40 543 aaKnown RBP7.03□□□□□ -1.28
CHD8-212ENST00000557329 LGR5O75473 907 aa7.03□□□□□ -1.28
CHD8-212ENST00000557329 EGFRP00533 1210 aa7.03□□□□□ -1.28
CHD8-212ENST00000557329 C1orf229Q6ZS94 237 aaPredicted RBP7.03□□□□□ -1.28
CHD8-212ENST00000557329 TREML1Q86YW5 311 aa7.03□□□□□ -1.28
CHD8-212ENST00000557329 HELQQ8TDG4 1101 aa7.03□□□□□ -1.28
CHD8-212ENST00000557329 PIK3R5Q8WYR1 880 aa7.03□□□□□ -1.28
CHD8-212ENST00000557329 TNFRSF25Q93038 417 aa7.03□□□□□ -1.28
CHD8-212ENST00000557329 KLK14Q9P0G3 267 aa7.03□□□□□ -1.28
CHD8-212ENST00000557329 GGA1Q9UJY5 639 aa7.03□□□□□ -1.28
CHD8-212ENST00000557329 ELOA3CA0A087WX78 387 aaPredicted RBP7.02□□□□□ -1.29
CHD8-212ENST00000557329 ELOA3DA6NLF2 546 aaPredicted RBP7.02□□□□□ -1.29
CHD8-212ENST00000557329 ADARB2-AS1A8MUL3 147 aa7.02□□□□□ -1.29
CHD8-212ENST00000557329 C2CD2LO14523 706 aa7.02□□□□□ -1.29
CHD8-212ENST00000557329 FURINP09958 794 aa7.02□□□□□ -1.29
CHD8-212ENST00000557329 EPXP11678 715 aa7.02□□□□□ -1.29
CHD8-212ENST00000557329 SFSWAPQ12872 951 aaKnown RBP7.02□□□□□ -1.29
CHD8-212ENST00000557329 ELOA3BQ3SY89 546 aa7.02□□□□□ -1.29
CHD8-212ENST00000557329 SYT9Q86SS6 491 aa7.02□□□□□ -1.29
CHD8-212ENST00000557329 ELOA3Q8NG57 546 aa7.02□□□□□ -1.29
CHD8-212ENST00000557329 MKNK1Q9BUB5 465 aa7.02□□□□□ -1.29
CHD8-212ENST00000557329 EGFL7Q9UHF1 273 aa7.02□□□□□ -1.29
CHD8-212ENST00000557329 LRFN2Q9ULH4 789 aa7.02□□□□□ -1.29
CHD8-212ENST00000557329 SMARCA2P51531 1590 aa7.01□□□□□ -1.29
CHD8-212ENST00000557329 ZCCHC6Q5VYS8 1495 aaKnown RBP7.01□□□□□ -1.29
CHD8-212ENST00000557329 FAM13AO94988 1023 aa7.01□□□□□ -1.29
CHD8-212ENST00000557329 MAP3K6O95382 1288 aa7.01□□□□□ -1.29
CHD8-212ENST00000557329 LINC00114Q6XXX2 140 aa7.01□□□□□ -1.29
CHD8-212ENST00000557329 TTC16Q8NEE8 873 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms