RNA–Protein interactions for RNA: ENST00000557084.1

SYNE2-226, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 689 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-226ENST00000557084 ALDH1B1P30837 517 aa15.39■□□□□ 0.05
SYNE2-226ENST00000557084 RASSF7Q02833 373 aa15.39■□□□□ 0.05
SYNE2-226ENST00000557084 GOLGA2Q08379 1002 aa15.39■□□□□ 0.05
SYNE2-226ENST00000557084 CCDC30Q5VVM6 783 aa15.39■□□□□ 0.05
SYNE2-226ENST00000557084 C8orf58Q8NAV2 365 aa15.39■□□□□ 0.05
SYNE2-226ENST00000557084 PLBD2Q8NHP8 589 aa15.39■□□□□ 0.05
SYNE2-226ENST00000557084 KLRG2A4D1S0 409 aaPredicted RBP15.38■□□□□ 0.05
SYNE2-226ENST00000557084 TCIRG1Q13488 830 aa15.38■□□□□ 0.05
SYNE2-226ENST00000557084 IL16Q14005 1332 aa15.38■□□□□ 0.05
SYNE2-226ENST00000557084 IBTKQ9P2D0 1353 aaPredicted RBP15.37■□□□□ 0.05
SYNE2-226ENST00000557084 NTSR2O95665 410 aa15.37■□□□□ 0.05
SYNE2-226ENST00000557084 RIC3Q7Z5B4 369 aa15.37■□□□□ 0.05
SYNE2-226ENST00000557084 NLRP3Q96P20 1036 aa15.37■□□□□ 0.05
SYNE2-226ENST00000557084 STK31Q9BXU1 1019 aa15.37■□□□□ 0.05
SYNE2-226ENST00000557084 TRMT112Q9UI30 125 aaKnown RBP15.37■□□□□ 0.05
SYNE2-226ENST00000557084 ANKRD31Q8N7Z5 1873 aa15.37■□□□□ 0.05
SYNE2-226ENST00000557084 ABCC12Q96J65 1359 aa15.36■□□□□ 0.05
SYNE2-226ENST00000557084 NUP98P52948 1817 aa15.36■□□□□ 0.05
SYNE2-226ENST00000557084 NFKBIEO00221 500 aa15.36■□□□□ 0.05
SYNE2-226ENST00000557084 C1QTNF8P60827 252 aa15.36■□□□□ 0.05
SYNE2-226ENST00000557084 CCDC93Q567U6 631 aa15.36■□□□□ 0.05
SYNE2-226ENST00000557084 NLRP10Q86W26 655 aa15.36■□□□□ 0.05
SYNE2-226ENST00000557084 WDR63Q8IWG1 891 aa15.36■□□□□ 0.05
SYNE2-226ENST00000557084 RBM17Q96I25 401 aaKnown RBP15.36■□□□□ 0.05
SYNE2-226ENST00000557084 TMX4Q9H1E5 349 aaPredicted RBP15.36■□□□□ 0.05
SYNE2-226ENST00000557084 TAOK3Q9H2K8 898 aa15.36■□□□□ 0.05
SYNE2-226ENST00000557084 RNF123Q5XPI4 1314 aa15.36■□□□□ 0.05
SYNE2-226ENST00000557084 KDM2BQ8NHM5 1336 aa15.36■□□□□ 0.05
SYNE2-226ENST00000557084 DLEC1Q9Y238 1755 aa15.35■□□□□ 0.05
SYNE2-226ENST00000557084 DDX58O95786 925 aaKnown RBP15.35■□□□□ 0.05
SYNE2-226ENST00000557084 ATP5J2-PTCD1G3V325 749 aa15.34■□□□□ 0.05
SYNE2-226ENST00000557084 CAPN15O75808 1086 aa15.34■□□□□ 0.05
SYNE2-226ENST00000557084 TWISTNBQ3B726 338 aaPredicted RBP15.34■□□□□ 0.05
SYNE2-226ENST00000557084 CRY2Q49AN0 593 aa15.34■□□□□ 0.05
SYNE2-226ENST00000557084 RTKN2Q8IZC4 609 aa15.34■□□□□ 0.05
SYNE2-226ENST00000557084 TSPYL6Q8N831 410 aa15.34■□□□□ 0.05
SYNE2-226ENST00000557084 ZNF428Q96B54 188 aa15.34■□□□□ 0.05
SYNE2-226ENST00000557084 PHAXQ9H814 394 aaKnown RBP15.34■□□□□ 0.05
SYNE2-226ENST00000557084 SH3TC1Q8TE82 1336 aa15.34■□□□□ 0.05
SYNE2-226ENST00000557084 HCLS1P14317 486 aaPredicted RBP15.33■□□□□ 0.04
SYNE2-226ENST00000557084 C16orf71Q8IYS4 520 aaPredicted RBP15.33■□□□□ 0.04
SYNE2-226ENST00000557084 MYH16Q9H6N6 1097 aa15.33■□□□□ 0.04
SYNE2-226ENST00000557084 COL11A2P13942 1736 aaPredicted RBP15.33■□□□□ 0.04
SYNE2-226ENST00000557084 ZC3H4Q9UPT8 1303 aaKnown RBP15.33■□□□□ 0.04
SYNE2-226ENST00000557084 TCERG1O14776 1098 aaKnown RBP15.32■□□□□ 0.04
SYNE2-226ENST00000557084 HOXA10P31260 410 aaPredicted RBP15.32■□□□□ 0.04
SYNE2-226ENST00000557084 SLC10A5Q5PT55 438 aa15.32■□□□□ 0.04
SYNE2-226ENST00000557084 C7orf43Q8WVR3 580 aa15.32■□□□□ 0.04
SYNE2-226ENST00000557084 FANCIQ9NVI1 1328 aa15.32■□□□□ 0.04
SYNE2-226ENST00000557084 CC2D2BQ6DHV5 1058 aa15.31■□□□□ 0.04
SYNE2-226ENST00000557084 DPY19L2Q6NUT2 758 aa15.31■□□□□ 0.04
SYNE2-226ENST00000557084 CRAMP1Q96RY5 1269 aa15.31■□□□□ 0.04
SYNE2-226ENST00000557084 ISCA1Q9BUE6 129 aa15.31■□□□□ 0.04
SYNE2-226ENST00000557084 NMRK2Q9NPI5 230 aa15.31■□□□□ 0.04
SYNE2-226ENST00000557084 LTBP3Q9NS15 1303 aa15.31■□□□□ 0.04
SYNE2-226ENST00000557084 RIC1Q4ADV7 1423 aa15.31■□□□□ 0.04
SYNE2-226ENST00000557084 SLX4Q8IY92 1834 aa15.31■□□□□ 0.04
SYNE2-226ENST00000557084 PPEF1O14829 653 aaPredicted RBP15.3■□□□□ 0.04
SYNE2-226ENST00000557084 HSP90B1P14625 803 aaKnown RBP15.3■□□□□ 0.04
SYNE2-226ENST00000557084 FKBP4Q02790 459 aaKnown RBP eCLIP15.3■□□□□ 0.04
SYNE2-226ENST00000557084 RTL5Q5HYW3 569 aaPredicted RBP15.3■□□□□ 0.04
SYNE2-226ENST00000557084 OLFM4Q6UX06 510 aa15.3■□□□□ 0.04
SYNE2-226ENST00000557084 C3orf67Q6ZVT6 689 aa15.3■□□□□ 0.04
SYNE2-226ENST00000557084 DDX46Q7L014 1031 aaKnown RBP15.3■□□□□ 0.04
SYNE2-226ENST00000557084 SYNE4Q8N205 404 aa15.3■□□□□ 0.04
SYNE2-226ENST00000557084 FAM89AQ96GI7 184 aa15.3■□□□□ 0.04
SYNE2-226ENST00000557084 MYD88Q99836 296 aa15.3■□□□□ 0.04
SYNE2-226ENST00000557084 PRELPP51888 382 aa15.29■□□□□ 0.04
SYNE2-226ENST00000557084 NEXNQ0ZGT2 675 aa15.29■□□□□ 0.04
SYNE2-226ENST00000557084 TRIM28Q13263 835 aaKnown RBP15.29■□□□□ 0.04
SYNE2-226ENST00000557084 GRIPAP1Q4V328 841 aa15.29■□□□□ 0.04
SYNE2-226ENST00000557084 RRAGCQ9HB90 399 aa15.29■□□□□ 0.04
SYNE2-226ENST00000557084 ZNF277Q9NRM2 450 aaPredicted RBP15.29■□□□□ 0.04
SYNE2-226ENST00000557084 CEP350Q5VT06 3117 aa15.28■□□□□ 0.04
SYNE2-226ENST00000557084 GLTPD2A6NH11 291 aa15.28■□□□□ 0.04
SYNE2-226ENST00000557084 KIF3CO14782 793 aa15.28■□□□□ 0.04
SYNE2-226ENST00000557084 EXOSC9Q06265 439 aaKnown RBP15.28■□□□□ 0.04
SYNE2-226ENST00000557084 MAP3K2Q9Y2U5 619 aa15.28■□□□□ 0.04
SYNE2-226ENST00000557084 PI4KAP2A4QPH2 592 aa15.27■□□□□ 0.04
SYNE2-226ENST00000557084 IRS4O14654 1257 aaPredicted RBP15.27■□□□□ 0.04
SYNE2-226ENST00000557084 BBOX1O75936 387 aa15.27■□□□□ 0.04
SYNE2-226ENST00000557084 KSR2Q6VAB6 950 aa15.27■□□□□ 0.04
SYNE2-226ENST00000557084 PI4KAP1Q8N8J0 262 aa15.27■□□□□ 0.04
SYNE2-226ENST00000557084 CCDC191Q8NCU4 936 aa15.27■□□□□ 0.04
SYNE2-226ENST00000557084 METTL22Q9BUU2 404 aaPredicted RBP15.27■□□□□ 0.04
SYNE2-226ENST00000557084 CWC25Q9NXE8 425 aaPredicted RBP15.27■□□□□ 0.04
SYNE2-226ENST00000557084 TNRC6CQ9HCJ0 1690 aaKnown RBP15.27■□□□□ 0.03
SYNE2-226ENST00000557084 ABCC4O15439 1325 aa15.26■□□□□ 0.03
SYNE2-226ENST00000557084 CCER2I3L3R5 266 aa15.26■□□□□ 0.03
SYNE2-226ENST00000557084 TOMM70O94826 608 aa15.26■□□□□ 0.03
SYNE2-226ENST00000557084 FKBP5Q13451 457 aaPredicted RBP15.26■□□□□ 0.03
SYNE2-226ENST00000557084 ZBTB38Q8NAP3 1195 aaPredicted RBP15.26■□□□□ 0.03
SYNE2-226ENST00000557084 JDP2Q8WYK2 163 aa15.26■□□□□ 0.03
SYNE2-226ENST00000557084 SBF1O95248 1867 aa15.26■□□□□ 0.03
SYNE2-226ENST00000557084 CACNA1SQ13698 1873 aa15.26■□□□□ 0.03
SYNE2-226ENST00000557084 VEGFAP15692 232 aaPredicted RBP15.25■□□□□ 0.03
SYNE2-226ENST00000557084 FLIIQ13045 1269 aa15.25■□□□□ 0.03
SYNE2-226ENST00000557084 GRAPQ13588 217 aa15.25■□□□□ 0.03
SYNE2-226ENST00000557084 GRAPLQ8TC17 118 aaPredicted RBP15.25■□□□□ 0.03
SYNE2-226ENST00000557084 PSMD1Q99460 953 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms