RNA–Protein interactions for RNA: ENST00000556923.1

LINC00648-203, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 276 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-203ENST00000556923 ELOA3Q8NG57 546 aa9.53□□□□□ -0.88
LINC00648-203ENST00000556923 QTRT2Q9H974 415 aaKnown RBP9.53□□□□□ -0.88
LINC00648-203ENST00000556923 TGFBR3LH3BV60 316 aa9.52□□□□□ -0.89
LINC00648-203ENST00000556923 GNB5O14775 395 aa9.52□□□□□ -0.89
LINC00648-203ENST00000556923 ELOAQ14241 798 aaKnown RBP9.52□□□□□ -0.89
LINC00648-203ENST00000556923 PLA2G4EQ3MJ16 856 aa9.52□□□□□ -0.89
LINC00648-203ENST00000556923 KLK14Q9P0G3 267 aa9.52□□□□□ -0.89
LINC00648-203ENST00000556923 DMGDHQ9UI17 866 aaKnown RBP9.52□□□□□ -0.89
LINC00648-203ENST00000556923 ADARB2-AS1A8MUL3 147 aa9.51□□□□□ -0.89
LINC00648-203ENST00000556923 STK32AQ8WU08 396 aa9.51□□□□□ -0.89
LINC00648-203ENST00000556923 TNFRSF25Q93038 417 aa9.51□□□□□ -0.89
LINC00648-203ENST00000556923 ACIN1Q9UKV3 1341 aaKnown RBP9.51□□□□□ -0.89
LINC00648-203ENST00000556923 FAM69CQ0P6D2 419 aa9.5□□□□□ -0.89
LINC00648-203ENST00000556923 DGKZQ13574 1117 aa9.5□□□□□ -0.89
LINC00648-203ENST00000556923 SWI5Q1ZZU3 235 aa9.5□□□□□ -0.89
LINC00648-203ENST00000556923 VTI1AQ96AJ9 217 aa9.5□□□□□ -0.89
LINC00648-203ENST00000556923 PRIMPOLQ96LW4 560 aa9.5□□□□□ -0.89
LINC00648-203ENST00000556923 KRBA1A5PL33 1030 aa9.49□□□□□ -0.89
LINC00648-203ENST00000556923 ARID3CA6NKF2 412 aa9.49□□□□□ -0.89
LINC00648-203ENST00000556923 IGHA1P01876 353 aa9.49□□□□□ -0.89
LINC00648-203ENST00000556923 ALAS2P22557 587 aa9.49□□□□□ -0.89
LINC00648-203ENST00000556923 FKBP5Q13451 457 aaPredicted RBP9.49□□□□□ -0.89
LINC00648-203ENST00000556923 NEUROD1Q13562 356 aa9.49□□□□□ -0.89
LINC00648-203ENST00000556923 BHMTQ93088 406 aa9.49□□□□□ -0.89
LINC00648-203ENST00000556923 PIK3R2O00459 728 aa9.48□□□□□ -0.89
LINC00648-203ENST00000556923 PRMT3O60678 531 aa9.48□□□□□ -0.89
LINC00648-203ENST00000556923 ATG7O95352 703 aa9.48□□□□□ -0.89
LINC00648-203ENST00000556923 GRNP28799 593 aaKnown RBP9.48□□□□□ -0.89
LINC00648-203ENST00000556923 OCLNQ16625 522 aa9.48□□□□□ -0.89
LINC00648-203ENST00000556923 CCDC97Q96F63 343 aaPredicted RBP9.48□□□□□ -0.89
LINC00648-203ENST00000556923 MYO19Q96H55 970 aa9.48□□□□□ -0.89
LINC00648-203ENST00000556923 ADH7P40394 386 aa9.47□□□□□ -0.89
LINC00648-203ENST00000556923 IDH3AP50213 366 aa9.47□□□□□ -0.89
LINC00648-203ENST00000556923 ALYREFQ86V81 257 aaKnown RBP9.47□□□□□ -0.89
LINC00648-203ENST00000556923 TRIM11Q96F44 468 aa9.47□□□□□ -0.89
LINC00648-203ENST00000556923 LRFN2Q9ULH4 789 aa9.47□□□□□ -0.89
LINC00648-203ENST00000556923 STARD13Q9Y3M8 1113 aa9.47□□□□□ -0.89
LINC00648-203ENST00000556923 INPP5BP32019 993 aa9.46□□□□□ -0.9
LINC00648-203ENST00000556923 GSX2Q9BZM3 304 aa9.46□□□□□ -0.9
LINC00648-203ENST00000556923 SERPINA10Q9UK55 444 aa9.46□□□□□ -0.9
LINC00648-203ENST00000556923 C11orf91Q3C1V1 193 aa9.45□□□□□ -0.9
LINC00648-203ENST00000556923 TMEM164Q5U3C3 297 aa9.45□□□□□ -0.9
LINC00648-203ENST00000556923 PBXIP1Q96AQ6 731 aa9.45□□□□□ -0.9
LINC00648-203ENST00000556923 SPOCK3Q9BQ16 436 aa9.45□□□□□ -0.9
LINC00648-203ENST00000556923 NOP53Q9NZM5 478 aaKnown RBP9.45□□□□□ -0.9
LINC00648-203ENST00000556923 ALBP02768 609 aa9.44□□□□□ -0.9
LINC00648-203ENST00000556923 PROCP04070 461 aa9.44□□□□□ -0.9
LINC00648-203ENST00000556923 M0R082 166 aa9.43□□□□□ -0.9
LINC00648-203ENST00000556923 MSTNO14793 375 aa9.43□□□□□ -0.9
LINC00648-203ENST00000556923 MICAL2O94851 1124 aa9.43□□□□□ -0.9
LINC00648-203ENST00000556923 CCINQ13939 588 aa9.43□□□□□ -0.9
LINC00648-203ENST00000556923 COX20Q5RI15 118 aa9.43□□□□□ -0.9
LINC00648-203ENST00000556923 C8orf86Q6ZUL3 223 aa9.43□□□□□ -0.9
LINC00648-203ENST00000556923 ZNF417Q8TAU3 575 aa9.43□□□□□ -0.9
LINC00648-203ENST00000556923 ZNF587Q96SQ5 575 aaPredicted RBP9.43□□□□□ -0.9
LINC00648-203ENST00000556923 PLVAPQ9BX97 442 aa9.43□□□□□ -0.9
LINC00648-203ENST00000556923 UBE2OQ9C0C9 1292 aaKnown RBP9.43□□□□□ -0.9
LINC00648-203ENST00000556923 EFCC1Q9HA90 598 aa9.43□□□□□ -0.9
LINC00648-203ENST00000556923 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.43□□□□□ -0.9
LINC00648-203ENST00000556923 EPB42P16452 691 aa9.42□□□□□ -0.9
LINC00648-203ENST00000556923 NFKB1P19838 968 aa9.42□□□□□ -0.9
LINC00648-203ENST00000556923 ARSDP51689 593 aa9.42□□□□□ -0.9
LINC00648-203ENST00000556923 TBC1D8BQ0IIM8 1120 aa9.42□□□□□ -0.9
LINC00648-203ENST00000556923 COL9A3Q14050 684 aaPredicted RBP9.42□□□□□ -0.9
LINC00648-203ENST00000556923 MICALL1Q8N3F8 863 aa9.42□□□□□ -0.9
LINC00648-203ENST00000556923 CXXC1Q9P0U4 656 aaPredicted RBP9.42□□□□□ -0.9
LINC00648-203ENST00000556923 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.42□□□□□ -0.9
LINC00648-203ENST00000556923 C20orf204Q6ZNR8 217 aa9.41□□□□□ -0.9
LINC00648-203ENST00000556923 IFT43Q96FT9 208 aa9.41□□□□□ -0.9
LINC00648-203ENST00000556923 PNMA5Q96PV4 448 aa9.41□□□□□ -0.9
LINC00648-203ENST00000556923 IGFLR1Q9H665 355 aa9.41□□□□□ -0.9
LINC00648-203ENST00000556923 SLC6A14Q9UN76 642 aa9.41□□□□□ -0.9
LINC00648-203ENST00000556923 OPLAHO14841 1288 aa9.4□□□□□ -0.9
LINC00648-203ENST00000556923 CAPN12Q6ZSI9 719 aa9.4□□□□□ -0.9
LINC00648-203ENST00000556923 MKNK1Q9BUB5 465 aa9.4□□□□□ -0.9
LINC00648-203ENST00000556923 SAP130Q9H0E3 1048 aa9.4□□□□□ -0.9
LINC00648-203ENST00000556923 PRDM6Q9NQX0 595 aa9.4□□□□□ -0.9
LINC00648-203ENST00000556923 TREML1Q86YW5 311 aa9.39□□□□□ -0.91
LINC00648-203ENST00000556923 CLP1Q92989 425 aaKnown RBP9.39□□□□□ -0.91
LINC00648-203ENST00000556923 COL26A1Q96A83 441 aa9.39□□□□□ -0.91
LINC00648-203ENST00000556923 DNAJB12Q9NXW2 375 aaKnown RBP9.39□□□□□ -0.91
LINC00648-203ENST00000556923 ZFATQ9P243 1243 aa9.39□□□□□ -0.91
LINC00648-203ENST00000556923 SLAIN2Q9P270 581 aa9.39□□□□□ -0.91
LINC00648-203ENST00000556923 USP20Q9Y2K6 914 aa9.39□□□□□ -0.91
LINC00648-203ENST00000556923 NID1P14543 1247 aa9.38□□□□□ -0.91
LINC00648-203ENST00000556923 CHRNA4P43681 627 aa9.38□□□□□ -0.91
LINC00648-203ENST00000556923 SUZ12Q15022 739 aaKnown RBP9.38□□□□□ -0.91
LINC00648-203ENST00000556923 KRT25Q7Z3Z0 450 aa9.38□□□□□ -0.91
LINC00648-203ENST00000556923 CCDC82Q8N4S0 544 aa9.38□□□□□ -0.91
LINC00648-203ENST00000556923 C1orf115Q9H7X2 142 aa9.38□□□□□ -0.91
LINC00648-203ENST00000556923 NAGPAQ9UK23 515 aa9.38□□□□□ -0.91
LINC00648-203ENST00000556923 C1QTNF9BB2RNN3 333 aa9.37□□□□□ -0.91
LINC00648-203ENST00000556923 TARSP26639 723 aaKnown RBP9.37□□□□□ -0.91
LINC00648-203ENST00000556923 FAM26DQ5JW98 314 aa9.37□□□□□ -0.91
LINC00648-203ENST00000556923 C16orf46Q6P387 395 aa9.37□□□□□ -0.91
LINC00648-203ENST00000556923 CD163Q86VB7 1156 aa9.37□□□□□ -0.91
LINC00648-203ENST00000556923 ETFBKMTQ8IXQ9 262 aa9.37□□□□□ -0.91
LINC00648-203ENST00000556923 RTCBQ9Y3I0 505 aaKnown RBP9.37□□□□□ -0.91
LINC00648-203ENST00000556923 MAP3K6O95382 1288 aa9.36□□□□□ -0.91
LINC00648-203ENST00000556923 RGL4Q8IZJ4 473 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms