RNA–Protein interactions for RNA: ENST00000556890.1

AL390334.1-204, humanhuman

TSL 1 (best)

Gene AL390334.1, Length 578 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390334.1-204ENST00000556890 SF3B2Q13435 895 aaKnown RBP9.54□□□□□ -0.88
AL390334.1-204ENST00000556890 ARID5BQ14865 1188 aa9.54□□□□□ -0.88
AL390334.1-204ENST00000556890 AGERQ15109 404 aa9.54□□□□□ -0.88
AL390334.1-204ENST00000556890 LIMD1Q9UGP4 676 aa9.54□□□□□ -0.88
AL390334.1-204ENST00000556890 BLMP54132 1417 aaPredicted RBP9.54□□□□□ -0.88
AL390334.1-204ENST00000556890 THSD7AQ9UPZ6 1657 aa9.54□□□□□ -0.88
AL390334.1-204ENST00000556890 GMPRP36959 345 aa9.53□□□□□ -0.88
AL390334.1-204ENST00000556890 SRPK2P78362 688 aaKnown RBP9.53□□□□□ -0.88
AL390334.1-204ENST00000556890 NBPF1Q3BBV0 1214 aa9.53□□□□□ -0.88
AL390334.1-204ENST00000556890 PURBQ96QR8 312 aaKnown RBP9.53□□□□□ -0.88
AL390334.1-204ENST00000556890 PRDM11Q9NQV5 511 aa9.53□□□□□ -0.88
AL390334.1-204ENST00000556890 TNS1Q9HBL0 1735 aaKnown RBP9.53□□□□□ -0.88
AL390334.1-204ENST00000556890 CENPJQ9HC77 1338 aaPredicted RBP9.53□□□□□ -0.88
AL390334.1-204ENST00000556890 POLR3AO14802 1390 aaPredicted RBP9.52□□□□□ -0.88
AL390334.1-204ENST00000556890 WNK3Q9BYP7 1800 aa9.52□□□□□ -0.89
AL390334.1-204ENST00000556890 ZIC2O95409 532 aaPredicted RBP9.52□□□□□ -0.89
AL390334.1-204ENST00000556890 NBPF14Q5TI25 921 aa9.52□□□□□ -0.89
AL390334.1-204ENST00000556890 NUTM2GQ5VZR2 741 aa9.52□□□□□ -0.89
AL390334.1-204ENST00000556890 PPIP5K1Q6PFW1 1433 aa9.52□□□□□ -0.89
AL390334.1-204ENST00000556890 KRT27Q7Z3Y8 459 aa9.52□□□□□ -0.89
AL390334.1-204ENST00000556890 HELBQ8NG08 1087 aaPredicted RBP9.52□□□□□ -0.89
AL390334.1-204ENST00000556890 TSC1Q92574 1164 aa9.52□□□□□ -0.89
AL390334.1-204ENST00000556890 ACEP12821 1306 aa9.52□□□□□ -0.89
AL390334.1-204ENST00000556890 GRM5P41594 1212 aa9.51□□□□□ -0.89
AL390334.1-204ENST00000556890 QPCTQ16769 361 aa9.51□□□□□ -0.89
AL390334.1-204ENST00000556890 C4orf48Q5BLP8 95 aa9.51□□□□□ -0.89
AL390334.1-204ENST00000556890 RSPH6AQ9H0K4 717 aa9.51□□□□□ -0.89
AL390334.1-204ENST00000556890 LMO7Q8WWI1 1683 aa9.51□□□□□ -0.89
AL390334.1-204ENST00000556890 KIAA0232Q92628 1395 aa9.5□□□□□ -0.89
AL390334.1-204ENST00000556890 ZC3H6P61129 1189 aaKnown RBP9.5□□□□□ -0.89
AL390334.1-204ENST00000556890 NEUROD1Q13562 356 aa9.5□□□□□ -0.89
AL390334.1-204ENST00000556890 NBPF8Q3BBV2 869 aa9.5□□□□□ -0.89
AL390334.1-204ENST00000556890 ABTB2Q8N961 1025 aa9.5□□□□□ -0.89
AL390334.1-204ENST00000556890 L3MBTL2Q969R5 705 aa9.5□□□□□ -0.89
AL390334.1-204ENST00000556890 C1QTNF2Q9BXJ5 285 aa9.5□□□□□ -0.89
AL390334.1-204ENST00000556890 MAP4K5Q9Y4K4 846 aa9.5□□□□□ -0.89
AL390334.1-204ENST00000556890 PIK3C2AO00443 1686 aa9.5□□□□□ -0.89
AL390334.1-204ENST00000556890 KAT6BQ8WYB5 2073 aa9.5□□□□□ -0.89
AL390334.1-204ENST00000556890 MON2Q7Z3U7 1717 aa9.5□□□□□ -0.89
AL390334.1-204ENST00000556890 ROCK2O75116 1388 aaKnown RBP9.5□□□□□ -0.89
AL390334.1-204ENST00000556890 PARP4Q9UKK3 1724 aaKnown RBP9.49□□□□□ -0.89
AL390334.1-204ENST00000556890 NR3C2P08235 984 aa9.49□□□□□ -0.89
AL390334.1-204ENST00000556890 VEGFBP49765 207 aa9.49□□□□□ -0.89
AL390334.1-204ENST00000556890 CHRNA2Q15822 529 aa9.49□□□□□ -0.89
AL390334.1-204ENST00000556890 SH3RF1Q7Z6J0 888 aa9.49□□□□□ -0.89
AL390334.1-204ENST00000556890 ZSCAN1Q8NBB4 408 aa9.49□□□□□ -0.89
AL390334.1-204ENST00000556890 GPKOWQ92917 476 aaPredicted RBP eCLIP9.49□□□□□ -0.89
AL390334.1-204ENST00000556890 ITPKCQ96DU7 683 aa9.49□□□□□ -0.89
AL390334.1-204ENST00000556890 SIN3AQ96ST3 1273 aa9.49□□□□□ -0.89
AL390334.1-204ENST00000556890 ZFAND3Q9H8U3 227 aa9.49□□□□□ -0.89
AL390334.1-204ENST00000556890 STRN4Q9NRL3 753 aa9.49□□□□□ -0.89
AL390334.1-204ENST00000556890 LTN1O94822 1766 aa9.49□□□□□ -0.89
AL390334.1-204ENST00000556890 SPATA31A5Q5VU36 1347 aa9.49□□□□□ -0.89
AL390334.1-204ENST00000556890 SPATA31A7Q8IWB4 1347 aa9.49□□□□□ -0.89
AL390334.1-204ENST00000556890 SBF2Q86WG5 1849 aa9.49□□□□□ -0.89
AL390334.1-204ENST00000556890 UPP2O95045 317 aa9.48□□□□□ -0.89
AL390334.1-204ENST00000556890 CLK2P49760 499 aaKnown RBP9.48□□□□□ -0.89
AL390334.1-204ENST00000556890 DEFB132Q7Z7B7 95 aa9.48□□□□□ -0.89
AL390334.1-204ENST00000556890 TRMT44Q8IYL2 757 aaKnown RBP9.48□□□□□ -0.89
AL390334.1-204ENST00000556890 EVC2Q86UK5 1308 aa9.48□□□□□ -0.89
AL390334.1-204ENST00000556890 BAG6P46379 1132 aa9.47□□□□□ -0.89
AL390334.1-204ENST00000556890 EVA1CP58658 441 aa9.47□□□□□ -0.89
AL390334.1-204ENST00000556890 NLRP13Q86W25 1043 aa9.47□□□□□ -0.89
AL390334.1-204ENST00000556890 USP35Q9P2H5 1018 aa9.47□□□□□ -0.89
AL390334.1-204ENST00000556890 CAMTA1Q9Y6Y1 1673 aa9.47□□□□□ -0.89
AL390334.1-204ENST00000556890 ERBB4Q15303 1308 aa9.47□□□□□ -0.89
AL390334.1-204ENST00000556890 BRD4O60885 1362 aaPredicted RBP9.47□□□□□ -0.89
AL390334.1-204ENST00000556890 SRCAPQ6ZRS2 3230 aa9.46□□□□□ -0.89
AL390334.1-204ENST00000556890 COL18A1P39060 1754 aa9.46□□□□□ -0.9
AL390334.1-204ENST00000556890 ZBTB7CA1YPR0 619 aa9.46□□□□□ -0.9
AL390334.1-204ENST00000556890 VSIG8P0DPA2 414 aa9.46□□□□□ -0.9
AL390334.1-204ENST00000556890 RTL5Q5HYW3 569 aaPredicted RBP9.46□□□□□ -0.9
AL390334.1-204ENST00000556890 SH3BP5LQ7L8J4 393 aa9.46□□□□□ -0.9
AL390334.1-204ENST00000556890 SLC24A3Q9HC58 644 aa9.46□□□□□ -0.9
AL390334.1-204ENST00000556890 SPATA31A1Q5TZJ5 1347 aa9.46□□□□□ -0.9
AL390334.1-204ENST00000556890 USP6P35125 1406 aa9.46□□□□□ -0.9
AL390334.1-204ENST00000556890 SSH2Q76I76 1423 aa9.46□□□□□ -0.9
AL390334.1-204ENST00000556890 RREB1Q92766 1687 aa9.45□□□□□ -0.9
AL390334.1-204ENST00000556890 MAN1A2O60476 641 aa9.45□□□□□ -0.9
AL390334.1-204ENST00000556890 LORP23490 312 aaPredicted RBP9.45□□□□□ -0.9
AL390334.1-204ENST00000556890 FAM182BQ5T319 152 aa9.45□□□□□ -0.9
AL390334.1-204ENST00000556890 MEIOBQ8N635 442 aa9.45□□□□□ -0.9
AL390334.1-204ENST00000556890 CABP1Q9NZU7 370 aa9.45□□□□□ -0.9
AL390334.1-204ENST00000556890 USP19O94966 1318 aa9.45□□□□□ -0.9
AL390334.1-204ENST00000556890 SLIT3O75094 1523 aa9.45□□□□□ -0.9
AL390334.1-204ENST00000556890 LRP5O75197 1615 aa9.45□□□□□ -0.9
AL390334.1-204ENST00000556890 C6orf118Q5T5N4 469 aa9.44□□□□□ -0.9
AL390334.1-204ENST00000556890 VASH1Q7L8A9 365 aaPredicted RBP9.44□□□□□ -0.9
AL390334.1-204ENST00000556890 EMILIN1Q9Y6C2 1016 aa9.44□□□□□ -0.9
AL390334.1-204ENST00000556890 CPDO75976 1380 aa9.44□□□□□ -0.9
AL390334.1-204ENST00000556890 LRRC37A3O60309 1634 aa9.44□□□□□ -0.9
AL390334.1-204ENST00000556890 NUP188Q5SRE5 1749 aa9.44□□□□□ -0.9
AL390334.1-204ENST00000556890 USP54Q70EL1 1684 aa9.43□□□□□ -0.9
AL390334.1-204ENST00000556890 COL5A2P05997 1499 aaPredicted RBP9.43□□□□□ -0.9
AL390334.1-204ENST00000556890 TONSLQ96HA7 1378 aa9.43□□□□□ -0.9
AL390334.1-204ENST00000556890 SOBPA7XYQ1 873 aa9.43□□□□□ -0.9
AL390334.1-204ENST00000556890 GCP02774 474 aa9.43□□□□□ -0.9
AL390334.1-204ENST00000556890 BMP2P12643 396 aa9.43□□□□□ -0.9
AL390334.1-204ENST00000556890 FSHRP23945 695 aa9.43□□□□□ -0.9
AL390334.1-204ENST00000556890 PDE3BQ13370 1112 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms