RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 NGEFQ8N5V2 710 aa15.79■□□□□ 0.12
ACTN1-221ENST00000556571 RPGRQ92834 1020 aaKnown RBP15.79■□□□□ 0.12
ACTN1-221ENST00000556571 DDX21Q9NR30 783 aaKnown RBP eCLIP15.79■□□□□ 0.12
ACTN1-221ENST00000556571 MIS18AQ9NYP9 233 aa15.79■□□□□ 0.12
ACTN1-221ENST00000556571 GJA3Q9Y6H8 435 aa15.79■□□□□ 0.12
ACTN1-221ENST00000556571 SNED1Q8TER0 1413 aa15.78■□□□□ 0.12
ACTN1-221ENST00000556571 MAP3K15Q6ZN16 1313 aa15.78■□□□□ 0.12
ACTN1-221ENST00000556571 KIF6Q6ZMV9 814 aa15.78■□□□□ 0.12
ACTN1-221ENST00000556571 LARGE2Q8N3Y3 721 aa15.78■□□□□ 0.12
ACTN1-221ENST00000556571 ADAMTSL1Q8N6G6 1762 aa15.77■□□□□ 0.12
ACTN1-221ENST00000556571 ABCC12Q96J65 1359 aa15.77■□□□□ 0.12
ACTN1-221ENST00000556571 NEFMP07197 916 aa15.77■□□□□ 0.12
ACTN1-221ENST00000556571 HSPA8P11142 646 aaKnown RBP15.77■□□□□ 0.12
ACTN1-221ENST00000556571 RBM17Q96I25 401 aaKnown RBP15.77■□□□□ 0.12
ACTN1-221ENST00000556571 CRAMP1Q96RY5 1269 aa15.77■□□□□ 0.12
ACTN1-221ENST00000556571 EPS15P42566 896 aa15.76■□□□□ 0.11
ACTN1-221ENST00000556571 TTLL7Q6ZT98 887 aa15.76■□□□□ 0.11
ACTN1-221ENST00000556571 USP50Q70EL3 339 aaPredicted RBP15.76■□□□□ 0.11
ACTN1-221ENST00000556571 RRP7AQ9Y3A4 280 aaKnown RBP15.76■□□□□ 0.11
ACTN1-221ENST00000556571 IBTKQ9P2D0 1353 aaPredicted RBP15.75■□□□□ 0.11
ACTN1-221ENST00000556571 GPTP24298 496 aa15.75■□□□□ 0.11
ACTN1-221ENST00000556571 ECE1P42892 770 aa15.75■□□□□ 0.11
ACTN1-221ENST00000556571 SCNN1DP51172 638 aa15.75■□□□□ 0.11
ACTN1-221ENST00000556571 EIF4A1P60842 406 aaKnown RBP15.75■□□□□ 0.11
ACTN1-221ENST00000556571 SUSD4Q5VX71 490 aa15.75■□□□□ 0.11
ACTN1-221ENST00000556571 RIC1Q4ADV7 1423 aa15.75■□□□□ 0.11
ACTN1-221ENST00000556571 PPEF1O14829 653 aaPredicted RBP15.74■□□□□ 0.11
ACTN1-221ENST00000556571 MYL6BP14649 208 aa15.74■□□□□ 0.11
ACTN1-221ENST00000556571 NIM1KQ8IY84 436 aa15.74■□□□□ 0.11
ACTN1-221ENST00000556571 ZNF34Q8IZ26 560 aa15.74■□□□□ 0.11
ACTN1-221ENST00000556571 ABHD8Q96I13 439 aa15.74■□□□□ 0.11
ACTN1-221ENST00000556571 CAPNS2Q96L46 248 aa15.74■□□□□ 0.11
ACTN1-221ENST00000556571 BEGAINQ9BUH8 593 aa15.74■□□□□ 0.11
ACTN1-221ENST00000556571 TMX4Q9H1E5 349 aaPredicted RBP15.74■□□□□ 0.11
ACTN1-221ENST00000556571 VPS33BQ9H267 617 aa15.74■□□□□ 0.11
ACTN1-221ENST00000556571 ZBTB3Q9H5J0 574 aa15.74■□□□□ 0.11
ACTN1-221ENST00000556571 UBN2Q6ZU65 1347 aa15.73■□□□□ 0.11
ACTN1-221ENST00000556571 PAXIP1Q6ZW49 1069 aaPredicted RBP15.73■□□□□ 0.11
ACTN1-221ENST00000556571 PPP1R42Q7Z4L9 355 aa15.73■□□□□ 0.11
ACTN1-221ENST00000556571 TCERG1O14776 1098 aaKnown RBP15.72■□□□□ 0.11
ACTN1-221ENST00000556571 NTSR2O95665 410 aa15.72■□□□□ 0.11
ACTN1-221ENST00000556571 FMR1Q06787 632 aaKnown RBP eCLIP15.72■□□□□ 0.11
ACTN1-221ENST00000556571 PARP10Q53GL7 1025 aa15.72■□□□□ 0.11
ACTN1-221ENST00000556571 GIGYF2Q6Y7W6 1299 aaKnown RBP15.72■□□□□ 0.11
ACTN1-221ENST00000556571 NLRP3Q96P20 1036 aa15.72■□□□□ 0.11
ACTN1-221ENST00000556571 GPR101Q96P66 508 aaPredicted RBP15.72■□□□□ 0.11
ACTN1-221ENST00000556571 COL4A5P29400 1685 aa15.72■□□□□ 0.11
ACTN1-221ENST00000556571 ERBB4Q15303 1308 aa15.71■□□□□ 0.11
ACTN1-221ENST00000556571 PPIP5K2O43314 1243 aa15.71■□□□□ 0.11
ACTN1-221ENST00000556571 CST9Q5W186 159 aa15.71■□□□□ 0.11
ACTN1-221ENST00000556571 ADARB2Q9NS39 739 aaKnown RBP15.71■□□□□ 0.11
ACTN1-221ENST00000556571 TLL2Q9Y6L7 1015 aa15.71■□□□□ 0.11
ACTN1-221ENST00000556571 TRAF5O00463 557 aa15.7■□□□□ 0.1
ACTN1-221ENST00000556571 MAP2K2P36507 400 aa15.7■□□□□ 0.1
ACTN1-221ENST00000556571 GRM1Q13255 1194 aa15.7■□□□□ 0.1
ACTN1-221ENST00000556571 SLC10A5Q5PT55 438 aa15.7■□□□□ 0.1
ACTN1-221ENST00000556571 CYP4F22Q6NT55 531 aa15.7■□□□□ 0.1
ACTN1-221ENST00000556571 C3orf67Q6ZVT6 689 aa15.7■□□□□ 0.1
ACTN1-221ENST00000556571 SUPT20HQ8NEM7 779 aa15.7■□□□□ 0.1
ACTN1-221ENST00000556571 GPRC5DQ9NZD1 345 aa15.7■□□□□ 0.1
ACTN1-221ENST00000556571 ZNRF3Q9ULT6 936 aa15.7■□□□□ 0.1
ACTN1-221ENST00000556571 ATP6V0A2Q9Y487 856 aa15.7■□□□□ 0.1
ACTN1-221ENST00000556571 NFE2L2Q16236 605 aa15.69■□□□□ 0.1
ACTN1-221ENST00000556571 AOC3Q16853 763 aa15.69■□□□□ 0.1
ACTN1-221ENST00000556571 PLEKHF1Q96S99 279 aa15.69■□□□□ 0.1
ACTN1-221ENST00000556571 UTP14AQ9BVJ6 771 aaKnown RBP15.69■□□□□ 0.1
ACTN1-221ENST00000556571 LTBP1Q14766 1721 aa15.68■□□□□ 0.1
ACTN1-221ENST00000556571 LAMB4A4D0S4 1761 aa15.68■□□□□ 0.1
ACTN1-221ENST00000556571 CXCL9Q07325 125 aa15.68■□□□□ 0.1
ACTN1-221ENST00000556571 SLC51AQ86UW1 340 aa15.68■□□□□ 0.1
ACTN1-221ENST00000556571 THUMPD2Q9BTF0 503 aaKnown RBP15.68■□□□□ 0.1
ACTN1-221ENST00000556571 RTFDC1Q9BY42 306 aaPredicted RBP15.68■□□□□ 0.1
ACTN1-221ENST00000556571 PNNQ9H307 717 aaKnown RBP15.68■□□□□ 0.1
ACTN1-221ENST00000556571 NUP98P52948 1817 aa15.68■□□□□ 0.1
ACTN1-221ENST00000556571 BBOX1O75936 387 aa15.67■□□□□ 0.1
ACTN1-221ENST00000556571 PGAP2Q9UHJ9 254 aa15.67■□□□□ 0.1
ACTN1-221ENST00000556571 CA12O43570 354 aa15.66■□□□□ 0.1
ACTN1-221ENST00000556571 CELF2O95319 508 aaKnown RBP15.66■□□□□ 0.1
ACTN1-221ENST00000556571 GMPSP49915 693 aaPredicted RBP15.66■□□□□ 0.1
ACTN1-221ENST00000556571 FAM161AQ3B820 660 aa15.66■□□□□ 0.1
ACTN1-221ENST00000556571 DPP8Q6V1X1 898 aaPredicted RBP15.66■□□□□ 0.1
ACTN1-221ENST00000556571 SAPCD2Q86UD0 394 aa15.66■□□□□ 0.1
ACTN1-221ENST00000556571 SP8Q8IXZ3 490 aa15.66■□□□□ 0.1
ACTN1-221ENST00000556571 ZC3H15Q8WU90 426 aaKnown RBP15.66■□□□□ 0.1
ACTN1-221ENST00000556571 HHIPL1Q96JK4 782 aa15.66■□□□□ 0.1
ACTN1-221ENST00000556571 ABCC4O15439 1325 aa15.66■□□□□ 0.1
ACTN1-221ENST00000556571 CDHR2Q9BYE9 1310 aa15.66■□□□□ 0.1
ACTN1-221ENST00000556571 CCDC85CA6NKD9 419 aa15.65■□□□□ 0.1
ACTN1-221ENST00000556571 AOC2O75106 756 aa15.65■□□□□ 0.1
ACTN1-221ENST00000556571 TNIP1Q15025 636 aa15.65■□□□□ 0.1
ACTN1-221ENST00000556571 PDIA6Q15084 440 aa15.65■□□□□ 0.1
ACTN1-221ENST00000556571 CIAPIN1Q6FI81 312 aa15.65■□□□□ 0.1
ACTN1-221ENST00000556571 LRP10Q7Z4F1 713 aa15.65■□□□□ 0.1
ACTN1-221ENST00000556571 MPNDQ8N594 471 aa15.65■□□□□ 0.1
ACTN1-221ENST00000556571 BCL2L13Q9BXK5 485 aa15.65■□□□□ 0.1
ACTN1-221ENST00000556571 TSPYL4Q9UJ04 414 aa15.65■□□□□ 0.1
ACTN1-221ENST00000556571 MAPK8IP3Q9UPT6 1336 aa15.65■□□□□ 0.1
ACTN1-221ENST00000556571 KDM3BQ7LBC6 1761 aa15.64■□□□□ 0.1
ACTN1-221ENST00000556571 EIF2S2P20042 333 aaKnown RBP15.64■□□□□ 0.09
ACTN1-221ENST00000556571 KIAA2012Q0VF49 1180 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms