RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 PLBD2Q8NHP8 589 aa10.5□□□□□ -0.73
VTI1B-206ENST00000556461 UTP14AQ9BVJ6 771 aaKnown RBP10.5□□□□□ -0.73
VTI1B-206ENST00000556461 GPBP1L1Q9HC44 474 aaPredicted RBP10.5□□□□□ -0.73
VTI1B-206ENST00000556461 HYPKQ9NX55 129 aa10.5□□□□□ -0.73
VTI1B-206ENST00000556461 IL16Q14005 1332 aa10.5□□□□□ -0.73
VTI1B-206ENST00000556461 FANCIQ9NVI1 1328 aa10.5□□□□□ -0.73
VTI1B-206ENST00000556461 HCLS1P14317 486 aaPredicted RBP10.49□□□□□ -0.73
VTI1B-206ENST00000556461 SLC10A5Q5PT55 438 aa10.49□□□□□ -0.73
VTI1B-206ENST00000556461 PPP1R42Q7Z4L9 355 aa10.49□□□□□ -0.73
VTI1B-206ENST00000556461 ISCA1Q9BUE6 129 aa10.49□□□□□ -0.73
VTI1B-206ENST00000556461 KIF3CO14782 793 aa10.48□□□□□ -0.73
VTI1B-206ENST00000556461 LMNB1P20700 586 aa10.48□□□□□ -0.73
VTI1B-206ENST00000556461 C1QTNF8P60827 252 aa10.48□□□□□ -0.73
VTI1B-206ENST00000556461 TWISTNBQ3B726 338 aaPredicted RBP10.48□□□□□ -0.73
VTI1B-206ENST00000556461 HSP90AB3PQ58FF7 597 aa10.48□□□□□ -0.73
VTI1B-206ENST00000556461 G2E3Q7L622 706 aa10.48□□□□□ -0.73
VTI1B-206ENST00000556461 WDR63Q8IWG1 891 aa10.48□□□□□ -0.73
VTI1B-206ENST00000556461 NMRK2Q9NPI5 230 aa10.48□□□□□ -0.73
VTI1B-206ENST00000556461 SBF1O95248 1867 aa10.48□□□□□ -0.73
VTI1B-206ENST00000556461 RIC1Q4ADV7 1423 aa10.48□□□□□ -0.73
VTI1B-206ENST00000556461 CACNA1SQ13698 1873 aa10.47□□□□□ -0.73
VTI1B-206ENST00000556461 HOXA10P31260 410 aaPredicted RBP10.47□□□□□ -0.73
VTI1B-206ENST00000556461 EXOSC9Q06265 439 aaKnown RBP10.47□□□□□ -0.73
VTI1B-206ENST00000556461 CCDC30Q5VVM6 783 aa10.47□□□□□ -0.73
VTI1B-206ENST00000556461 RIC3Q7Z5B4 369 aa10.47□□□□□ -0.73
VTI1B-206ENST00000556461 TRMT112Q9UI30 125 aaKnown RBP10.47□□□□□ -0.73
VTI1B-206ENST00000556461 SNED1Q8TER0 1413 aa10.47□□□□□ -0.73
VTI1B-206ENST00000556461 ANKRD36CQ5JPF3 1778 aa10.47□□□□□ -0.73
VTI1B-206ENST00000556461 ARFGEF2Q9Y6D5 1785 aa10.47□□□□□ -0.73
VTI1B-206ENST00000556461 CEP350Q5VT06 3117 aa10.47□□□□□ -0.73
VTI1B-206ENST00000556461 VAMP4O75379 141 aa10.46□□□□□ -0.73
VTI1B-206ENST00000556461 GOLGA2Q08379 1002 aa10.46□□□□□ -0.73
VTI1B-206ENST00000556461 CCDC93Q567U6 631 aa10.46□□□□□ -0.73
VTI1B-206ENST00000556461 RTL5Q5HYW3 569 aaPredicted RBP10.46□□□□□ -0.73
VTI1B-206ENST00000556461 RPGRQ92834 1020 aaKnown RBP10.46□□□□□ -0.73
VTI1B-206ENST00000556461 FAM89AQ96GI7 184 aa10.46□□□□□ -0.73
VTI1B-206ENST00000556461 MYD88Q99836 296 aa10.46□□□□□ -0.73
VTI1B-206ENST00000556461 TAOK3Q9H2K8 898 aa10.46□□□□□ -0.73
VTI1B-206ENST00000556461 SH3TC1Q8TE82 1336 aa10.46□□□□□ -0.73
VTI1B-206ENST00000556461 ZNF521Q96K83 1311 aa10.46□□□□□ -0.73
VTI1B-206ENST00000556461 FER1L6Q2WGJ9 1857 aa10.46□□□□□ -0.74
VTI1B-206ENST00000556461 LTBP3Q9NS15 1303 aa10.45□□□□□ -0.74
VTI1B-206ENST00000556461 ALDH1B1P30837 517 aa10.45□□□□□ -0.74
VTI1B-206ENST00000556461 TRIM28Q13263 835 aaKnown RBP10.45□□□□□ -0.74
VTI1B-206ENST00000556461 JARID2Q92833 1246 aaPredicted RBP10.45□□□□□ -0.74
VTI1B-206ENST00000556461 RBM17Q96I25 401 aaKnown RBP10.45□□□□□ -0.74
VTI1B-206ENST00000556461 NLRP3Q96P20 1036 aa10.45□□□□□ -0.74
VTI1B-206ENST00000556461 CRAMP1Q96RY5 1269 aa10.45□□□□□ -0.74
VTI1B-206ENST00000556461 ZNF277Q9NRM2 450 aaPredicted RBP10.45□□□□□ -0.74
VTI1B-206ENST00000556461 ABCC4O15439 1325 aa10.44□□□□□ -0.74
VTI1B-206ENST00000556461 RNF123Q5XPI4 1314 aa10.44□□□□□ -0.74
VTI1B-206ENST00000556461 PI4KAP2A4QPH2 592 aa10.44□□□□□ -0.74
VTI1B-206ENST00000556461 PPEF1O14829 653 aaPredicted RBP10.44□□□□□ -0.74
VTI1B-206ENST00000556461 SLC4A2P04920 1241 aa10.44□□□□□ -0.74
VTI1B-206ENST00000556461 FKBP4Q02790 459 aaKnown RBP eCLIP10.44□□□□□ -0.74
VTI1B-206ENST00000556461 SOGA3Q5TF21 947 aa10.44□□□□□ -0.74
VTI1B-206ENST00000556461 PI4KAP1Q8N8J0 262 aa10.44□□□□□ -0.74
VTI1B-206ENST00000556461 METTL22Q9BUU2 404 aaPredicted RBP10.44□□□□□ -0.74
VTI1B-206ENST00000556461 MAP3K2Q9Y2U5 619 aa10.44□□□□□ -0.74
VTI1B-206ENST00000556461 COL4A1P02462 1669 aa10.44□□□□□ -0.74
VTI1B-206ENST00000556461 CCER2I3L3R5 266 aa10.43□□□□□ -0.74
VTI1B-206ENST00000556461 IGKV5-2P06315 115 aa10.43□□□□□ -0.74
VTI1B-206ENST00000556461 KSR2Q6VAB6 950 aa10.43□□□□□ -0.74
VTI1B-206ENST00000556461 STK31Q9BXU1 1019 aa10.43□□□□□ -0.74
VTI1B-206ENST00000556461 RRAGCQ9HB90 399 aa10.43□□□□□ -0.74
VTI1B-206ENST00000556461 CCDC88AQ3V6T2 1871 aa10.42□□□□□ -0.74
VTI1B-206ENST00000556461 LAMB2P55268 1798 aa10.42□□□□□ -0.74
VTI1B-206ENST00000556461 TIAM2Q8IVF5 1701 aa10.42□□□□□ -0.74
VTI1B-206ENST00000556461 ZC3H4Q9UPT8 1303 aaKnown RBP10.42□□□□□ -0.74
VTI1B-206ENST00000556461 COL4A5P29400 1685 aa10.42□□□□□ -0.74
VTI1B-206ENST00000556461 GLTPD2A6NH11 291 aa10.42□□□□□ -0.74
VTI1B-206ENST00000556461 POTECB2RU33 542 aa10.42□□□□□ -0.74
VTI1B-206ENST00000556461 IRS4O14654 1257 aaPredicted RBP10.42□□□□□ -0.74
VTI1B-206ENST00000556461 DDX58O95786 925 aaKnown RBP10.42□□□□□ -0.74
VTI1B-206ENST00000556461 RTKN2Q8IZC4 609 aa10.42□□□□□ -0.74
VTI1B-206ENST00000556461 ZBTB38Q8NAP3 1195 aaPredicted RBP10.42□□□□□ -0.74
VTI1B-206ENST00000556461 DDX60Q8IY21 1712 aaKnown RBP10.41□□□□□ -0.74
VTI1B-206ENST00000556461 KDM2BQ8NHM5 1336 aa10.41□□□□□ -0.74
VTI1B-206ENST00000556461 IARSP41252 1262 aaKnown RBP10.41□□□□□ -0.74
VTI1B-206ENST00000556461 FLIIQ13045 1269 aa10.41□□□□□ -0.74
VTI1B-206ENST00000556461 SF3B3Q15393 1217 aaKnown RBP10.41□□□□□ -0.74
VTI1B-206ENST00000556461 CWF19L2Q2TBE0 894 aaKnown RBP10.41□□□□□ -0.74
VTI1B-206ENST00000556461 CCDC191Q8NCU4 936 aa10.41□□□□□ -0.74
VTI1B-206ENST00000556461 CELF1Q92879 486 aaKnown RBP10.41□□□□□ -0.74
VTI1B-206ENST00000556461 CDCA7LQ96GN5 454 aa10.41□□□□□ -0.74
VTI1B-206ENST00000556461 CHMP4AQ9BY43 222 aa10.41□□□□□ -0.74
VTI1B-206ENST00000556461 MYH16Q9H6N6 1097 aa10.41□□□□□ -0.74
VTI1B-206ENST00000556461 CWC25Q9NXE8 425 aaPredicted RBP10.41□□□□□ -0.74
VTI1B-206ENST00000556461 ATP6V0A2Q9Y487 856 aa10.41□□□□□ -0.74
VTI1B-206ENST00000556461 TAF1P21675 1872 aa10.4□□□□□ -0.74
VTI1B-206ENST00000556461 ZNF541Q9H0D2 1346 aa10.4□□□□□ -0.74
VTI1B-206ENST00000556461 NEURL1BA8MQ27 555 aa10.4□□□□□ -0.74
VTI1B-206ENST00000556461 DDNO94850 711 aaPredicted RBP10.4□□□□□ -0.74
VTI1B-206ENST00000556461 PCCAP05165 728 aaPredicted RBP10.4□□□□□ -0.74
VTI1B-206ENST00000556461 GRAPQ13588 217 aa10.4□□□□□ -0.74
VTI1B-206ENST00000556461 CC2D2BQ6DHV5 1058 aa10.4□□□□□ -0.74
VTI1B-206ENST00000556461 DDX46Q7L014 1031 aaKnown RBP10.4□□□□□ -0.74
VTI1B-206ENST00000556461 MIER1Q8N108 512 aa10.4□□□□□ -0.74
VTI1B-206ENST00000556461 GRAPLQ8TC17 118 aaPredicted RBP10.4□□□□□ -0.74
VTI1B-206ENST00000556461 PSMD1Q99460 953 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms