RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 PPP1R1BQ9UD71 204 aaPredicted RBP6.14□□□□□ -1.43
TMEM260-210ENST00000556422 NRDCO43847 1150 aa6.14□□□□□ -1.43
TMEM260-210ENST00000556422 PEX14O75381 377 aa6.14□□□□□ -1.43
TMEM260-210ENST00000556422 POLA2Q14181 598 aa6.14□□□□□ -1.43
TMEM260-210ENST00000556422 DNAAF4Q8WXU2 420 aa6.14□□□□□ -1.43
TMEM260-210ENST00000556422 SNX21Q969T3 373 aa6.14□□□□□ -1.43
TMEM260-210ENST00000556422 RBM42Q9BTD8 480 aaKnown RBP6.14□□□□□ -1.43
TMEM260-210ENST00000556422 TOGARAM1Q9Y4F4 1720 aa6.13□□□□□ -1.43
TMEM260-210ENST00000556422 CYP27B1O15528 508 aa6.13□□□□□ -1.43
TMEM260-210ENST00000556422 UTP14CQ5TAP6 766 aaKnown RBP6.13□□□□□ -1.43
TMEM260-210ENST00000556422 CCDC181Q5TID7 509 aa6.13□□□□□ -1.43
TMEM260-210ENST00000556422 ZBTB9Q96C00 473 aa6.13□□□□□ -1.43
TMEM260-210ENST00000556422 PAIP2Q9BPZ3 127 aaKnown RBP6.13□□□□□ -1.43
TMEM260-210ENST00000556422 SRCIN1Q9C0H9 1055 aa6.13□□□□□ -1.43
TMEM260-210ENST00000556422 NLRP2Q9NX02 1062 aa6.13□□□□□ -1.43
TMEM260-210ENST00000556422 DBF4Q9UBU7 674 aaPredicted RBP6.13□□□□□ -1.43
TMEM260-210ENST00000556422 UBTFL1P0CB47 393 aaPredicted RBP6.13□□□□□ -1.43
TMEM260-210ENST00000556422 FOXD4Q12950 439 aaPredicted RBP6.13□□□□□ -1.43
TMEM260-210ENST00000556422 ZNF790Q6PG37 636 aa6.13□□□□□ -1.43
TMEM260-210ENST00000556422 TSHZ1Q6ZSZ6 1077 aa6.13□□□□□ -1.43
TMEM260-210ENST00000556422 SLC52A2Q9HAB3 445 aa6.13□□□□□ -1.43
TMEM260-210ENST00000556422 ZNF335Q9H4Z2 1342 aaPredicted RBP6.13□□□□□ -1.43
TMEM260-210ENST00000556422 COL5A2P05997 1499 aaPredicted RBP6.13□□□□□ -1.43
TMEM260-210ENST00000556422 SLC39A6Q13433 755 aa6.13□□□□□ -1.43
TMEM260-210ENST00000556422 LRP10Q7Z4F1 713 aa6.13□□□□□ -1.43
TMEM260-210ENST00000556422 SPRYD3Q8NCJ5 442 aa6.13□□□□□ -1.43
TMEM260-210ENST00000556422 LRRCC1Q9C099 1032 aa6.13□□□□□ -1.43
TMEM260-210ENST00000556422 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.13□□□□□ -1.432e-7■■■■■ 28.3
TMEM260-210ENST00000556422 STK24Q9Y6E0 443 aa6.13□□□□□ -1.43
TMEM260-210ENST00000556422 SOS2Q07890 1332 aaPredicted RBP6.13□□□□□ -1.43
TMEM260-210ENST00000556422 MARCH6O60337 910 aa6.12□□□□□ -1.43
TMEM260-210ENST00000556422 PPP1R42Q7Z4L9 355 aa6.12□□□□□ -1.43
TMEM260-210ENST00000556422 RAPGEF4Q8WZA2 1011 aa6.12□□□□□ -1.43
TMEM260-210ENST00000556422 FBXW7Q969H0 707 aa6.12□□□□□ -1.43
TMEM260-210ENST00000556422 USP26Q9BXU7 913 aa6.12□□□□□ -1.43
TMEM260-210ENST00000556422 FAM13BQ9NYF5 915 aa6.12□□□□□ -1.43
TMEM260-210ENST00000556422 NUP188Q5SRE5 1749 aa6.12□□□□□ -1.43
TMEM260-210ENST00000556422 PRR29P0C7W0 189 aa6.12□□□□□ -1.43
TMEM260-210ENST00000556422 CALRP27797 417 aaKnown RBP6.12□□□□□ -1.43
TMEM260-210ENST00000556422 NFATC2IPQ8NCF5 419 aa6.12□□□□□ -1.43
TMEM260-210ENST00000556422 MAP3K2Q9Y2U5 619 aa6.12□□□□□ -1.43
TMEM260-210ENST00000556422 TPD52L2O43399 206 aaKnown RBP6.11□□□□□ -1.43
TMEM260-210ENST00000556422 TATP17735 454 aaPredicted RBP6.11□□□□□ -1.43
TMEM260-210ENST00000556422 MX1P20591 662 aa6.11□□□□□ -1.43
TMEM260-210ENST00000556422 MTX1Q13505 466 aa6.11□□□□□ -1.43
TMEM260-210ENST00000556422 CWF19L2Q2TBE0 894 aaKnown RBP6.11□□□□□ -1.43
TMEM260-210ENST00000556422 UNC5CLQ8IV45 518 aa6.11□□□□□ -1.43
TMEM260-210ENST00000556422 KAZALD1Q96I82 304 aa6.11□□□□□ -1.43
TMEM260-210ENST00000556422 STAP2Q9UGK3 403 aa6.11□□□□□ -1.43
TMEM260-210ENST00000556422 KIF4AO95239 1232 aa6.11□□□□□ -1.43
TMEM260-210ENST00000556422 SATB1Q01826 763 aa6.11□□□□□ -1.43
TMEM260-210ENST00000556422 KSR2Q6VAB6 950 aa6.11□□□□□ -1.43
TMEM260-210ENST00000556422 GET4Q7L5D6 327 aaPredicted RBP6.11□□□□□ -1.43
TMEM260-210ENST00000556422 IFNL2Q8IZJ0 200 aa6.11□□□□□ -1.43
TMEM260-210ENST00000556422 ZNF496Q96IT1 587 aaPredicted RBP6.11□□□□□ -1.43
TMEM260-210ENST00000556422 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.11□□□□□ -1.43
TMEM260-210ENST00000556422 DDX21Q9NR30 783 aaKnown RBP eCLIP6.11□□□□□ -1.43
TMEM260-210ENST00000556422 GEMIN8Q9NWZ8 242 aaKnown RBP6.11□□□□□ -1.43
TMEM260-210ENST00000556422 TJP1Q07157 1748 aa6.11□□□□□ -1.43
TMEM260-210ENST00000556422 SRGAP3O43295 1099 aa6.11□□□□□ -1.43
TMEM260-210ENST00000556422 LETM1O95202 739 aaPredicted RBP6.11□□□□□ -1.43
TMEM260-210ENST00000556422 TNNT1P13805 278 aa6.11□□□□□ -1.43
TMEM260-210ENST00000556422 CCDC96Q2M329 555 aa6.11□□□□□ -1.43
TMEM260-210ENST00000556422 HSCBQ8IWL3 235 aa6.11□□□□□ -1.43
TMEM260-210ENST00000556422 ATL2Q8NHH9 583 aa6.11□□□□□ -1.43
TMEM260-210ENST00000556422 IL25Q9H293 177 aa6.11□□□□□ -1.43
TMEM260-210ENST00000556422 IL1RAPL2Q9NP60 686 aa6.11□□□□□ -1.43
TMEM260-210ENST00000556422 RBM28Q9NW13 759 aaKnown RBP6.11□□□□□ -1.43
TMEM260-210ENST00000556422 UTYO14607 1347 aa6.1□□□□□ -1.43
TMEM260-210ENST00000556422 WDR17Q8IZU2 1322 aa6.1□□□□□ -1.43
TMEM260-210ENST00000556422 KCPQ6ZWJ8 1503 aa6.1□□□□□ -1.43
TMEM260-210ENST00000556422 DMTNQ08495 405 aa6.1□□□□□ -1.43
TMEM260-210ENST00000556422 RNF217Q8TC41 542 aa6.1□□□□□ -1.43
TMEM260-210ENST00000556422 SLAIN2Q9P270 581 aa6.1□□□□□ -1.43
TMEM260-210ENST00000556422 SPG7Q9UQ90 795 aa6.1□□□□□ -1.43
TMEM260-210ENST00000556422 GOLGA6CA6NDK9 693 aa6.1□□□□□ -1.43
TMEM260-210ENST00000556422 GOLGA6BA6NDN3 693 aa6.1□□□□□ -1.43
TMEM260-210ENST00000556422 IGKV5-2P06315 115 aa6.1□□□□□ -1.43
TMEM260-210ENST00000556422 GOLGA6DP0CG33 693 aa6.1□□□□□ -1.43
TMEM260-210ENST00000556422 PI4K2BQ8TCG2 481 aa6.1□□□□□ -1.43
TMEM260-210ENST00000556422 DCAF5Q96JK2 942 aa6.1□□□□□ -1.43
TMEM260-210ENST00000556422 CALR3Q96L12 384 aaKnown RBP6.1□□□□□ -1.43
TMEM260-210ENST00000556422 HYPKQ9NX55 129 aa6.1□□□□□ -1.43
TMEM260-210ENST00000556422 GOLGA6AQ9NYA3 693 aa6.1□□□□□ -1.43
TMEM260-210ENST00000556422 ITGB4P16144 1822 aa6.1□□□□□ -1.43
TMEM260-210ENST00000556422 ALDH1L1O75891 902 aa6.1□□□□□ -1.43
TMEM260-210ENST00000556422 CSB-PGBD3P0DP91 1061 aa6.1□□□□□ -1.43
TMEM260-210ENST00000556422 NAP1L1P55209 391 aaKnown RBP6.1□□□□□ -1.43
TMEM260-210ENST00000556422 RHPN1Q8TCX5 695 aa6.1□□□□□ -1.43
TMEM260-210ENST00000556422 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.1□□□□□ -1.43
TMEM260-210ENST00000556422 RRAGDQ9NQL2 400 aaPredicted RBP6.1□□□□□ -1.43
TMEM260-210ENST00000556422 USP16Q9Y5T5 823 aa6.1□□□□□ -1.43
TMEM260-210ENST00000556422 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.1□□□□□ -1.43
TMEM260-210ENST00000556422 SURF6O75683 361 aaKnown RBP6.09□□□□□ -1.43
TMEM260-210ENST00000556422 PIP4K2BP78356 416 aa6.09□□□□□ -1.43
TMEM260-210ENST00000556422 MTERF4Q7Z6M4 381 aaKnown RBP6.09□□□□□ -1.43
TMEM260-210ENST00000556422 AOX1Q06278 1338 aa6.09□□□□□ -1.43
TMEM260-210ENST00000556422 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.09□□□□□ -1.43
TMEM260-210ENST00000556422 K7ELQ4 463 aaPredicted RBP6.09□□□□□ -1.43
TMEM260-210ENST00000556422 TOM1O60784 492 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms