RNA–Protein interactions for RNA: ENST00000556347.1

AL355916.3-201, humanhuman

APPRIS P1 TSL 4 BASIC

Gene AL355916.3, Length 779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL355916.3-201ENST00000556347 COL3A1P02461 1466 aaPredicted RBP12.52□□□□□ -0.41
AL355916.3-201ENST00000556347 SNRPA1P09661 255 aaKnown RBP12.51□□□□□ -0.41
AL355916.3-201ENST00000556347 EPHX2P34913 555 aa12.51□□□□□ -0.41
AL355916.3-201ENST00000556347 PNMA8AQ86V59 439 aaPredicted RBP12.51□□□□□ -0.41
AL355916.3-201ENST00000556347 RTF1Q92541 710 aaKnown RBP12.51□□□□□ -0.41
AL355916.3-201ENST00000556347 NIP7Q9Y221 180 aaKnown RBP eCLIP12.51□□□□□ -0.41
AL355916.3-201ENST00000556347 RASSF10A6NK89 507 aa12.5□□□□□ -0.41
AL355916.3-201ENST00000556347 HSPA8P11142 646 aaKnown RBP12.5□□□□□ -0.41
AL355916.3-201ENST00000556347 GTF2E1P29083 439 aaPredicted RBP12.5□□□□□ -0.41
AL355916.3-201ENST00000556347 ALDH1B1P30837 517 aa12.5□□□□□ -0.41
AL355916.3-201ENST00000556347 PRKAR2BP31323 418 aa12.5□□□□□ -0.41
AL355916.3-201ENST00000556347 ABHD8Q96I13 439 aa12.5□□□□□ -0.41
AL355916.3-201ENST00000556347 CFAP53Q96M91 514 aa12.5□□□□□ -0.41
AL355916.3-201ENST00000556347 ZNF541Q9H0D2 1346 aa12.5□□□□□ -0.41
AL355916.3-201ENST00000556347 LTBP1Q14766 1721 aa12.49□□□□□ -0.41
AL355916.3-201ENST00000556347 NPC1L1Q9UHC9 1359 aa12.49□□□□□ -0.41
AL355916.3-201ENST00000556347 KLRG2A4D1S0 409 aaPredicted RBP12.49□□□□□ -0.41
AL355916.3-201ENST00000556347 FAM177BA6PVY3 158 aa12.49□□□□□ -0.41
AL355916.3-201ENST00000556347 RGL2O15211 777 aa12.49□□□□□ -0.41
AL355916.3-201ENST00000556347 IARSP41252 1262 aaKnown RBP12.49□□□□□ -0.41
AL355916.3-201ENST00000556347 LBX1P52954 281 aa12.49□□□□□ -0.41
AL355916.3-201ENST00000556347 DEFB115Q30KQ5 88 aa12.49□□□□□ -0.41
AL355916.3-201ENST00000556347 FAM161AQ3B820 660 aa12.49□□□□□ -0.41
AL355916.3-201ENST00000556347 CNTROBQ8N137 903 aa12.49□□□□□ -0.41
AL355916.3-201ENST00000556347 PHACTR3Q96KR7 559 aa12.49□□□□□ -0.41
AL355916.3-201ENST00000556347 RNF123Q5XPI4 1314 aa12.48□□□□□ -0.41
AL355916.3-201ENST00000556347 PRAMEF22A3QJZ6 481 aa12.48□□□□□ -0.41
AL355916.3-201ENST00000556347 RGS19P49795 217 aa12.48□□□□□ -0.41
AL355916.3-201ENST00000556347 MAP1SQ66K74 1059 aaPredicted RBP12.48□□□□□ -0.41
AL355916.3-201ENST00000556347 OLFM4Q6UX06 510 aa12.48□□□□□ -0.41
AL355916.3-201ENST00000556347 GPC2Q8N158 579 aa12.48□□□□□ -0.41
AL355916.3-201ENST00000556347 SYNE4Q8N205 404 aa12.48□□□□□ -0.41
AL355916.3-201ENST00000556347 JDP2Q8WYK2 163 aa12.48□□□□□ -0.41
AL355916.3-201ENST00000556347 ABT1Q9ULW3 272 aaKnown RBP12.48□□□□□ -0.41
AL355916.3-201ENST00000556347 NUDCQ9Y266 331 aa12.48□□□□□ -0.41
AL355916.3-201ENST00000556347 NUP98P52948 1817 aa12.48□□□□□ -0.41
AL355916.3-201ENST00000556347 COL4A5P29400 1685 aa12.48□□□□□ -0.41
AL355916.3-201ENST00000556347 FZD9O00144 591 aa12.47□□□□□ -0.41
AL355916.3-201ENST00000556347 GALR2O43603 387 aaPredicted RBP12.47□□□□□ -0.41
AL355916.3-201ENST00000556347 MAP2K1Q02750 393 aaPredicted RBP12.47□□□□□ -0.41
AL355916.3-201ENST00000556347 MCM10Q7L590 875 aa12.47□□□□□ -0.41
AL355916.3-201ENST00000556347 RSPH6AQ9H0K4 717 aa12.47□□□□□ -0.41
AL355916.3-201ENST00000556347 TRPM7Q96QT4 1865 aa12.46□□□□□ -0.41
AL355916.3-201ENST00000556347 LMOD1P29536 600 aaPredicted RBP12.46□□□□□ -0.41
AL355916.3-201ENST00000556347 EIF6P56537 245 aaKnown RBP12.46□□□□□ -0.41
AL355916.3-201ENST00000556347 PSMD1Q99460 953 aa12.46□□□□□ -0.41
AL355916.3-201ENST00000556347 NYXQ9GZU5 481 aa12.46□□□□□ -0.41
AL355916.3-201ENST00000556347 LAMB4A4D0S4 1761 aa12.46□□□□□ -0.42
AL355916.3-201ENST00000556347 WDR33Q9C0J8 1336 aaKnown RBP12.45□□□□□ -0.42
AL355916.3-201ENST00000556347 NBPF26B4DH59 902 aa12.45□□□□□ -0.42
AL355916.3-201ENST00000556347 U2AF1L5P0DN76 240 aaPredicted RBP12.45□□□□□ -0.42
AL355916.3-201ENST00000556347 U2AF1Q01081 240 aaKnown RBP eCLIP12.45□□□□□ -0.42
AL355916.3-201ENST00000556347 CC2D2BQ6DHV5 1058 aa12.45□□□□□ -0.42
AL355916.3-201ENST00000556347 NBPF10Q6P3W6 841 aaKnown RBP12.45□□□□□ -0.42
AL355916.3-201ENST00000556347 PAXIP1Q6ZW49 1069 aaPredicted RBP12.45□□□□□ -0.42
AL355916.3-201ENST00000556347 NBPF15Q8N660 670 aa12.45□□□□□ -0.42
AL355916.3-201ENST00000556347 BEGAINQ9BUH8 593 aa12.45□□□□□ -0.42
AL355916.3-201ENST00000556347 GJA3Q9Y6H8 435 aa12.45□□□□□ -0.42
AL355916.3-201ENST00000556347 HLFQ16534 295 aa12.44□□□□□ -0.42
AL355916.3-201ENST00000556347 RPGRQ92834 1020 aaKnown RBP12.44□□□□□ -0.42
AL355916.3-201ENST00000556347 PDE4DIPQ5VU43 2346 aa12.43□□□□□ -0.42
AL355916.3-201ENST00000556347 HTATSF1O43719 755 aaKnown RBP12.43□□□□□ -0.42
AL355916.3-201ENST00000556347 DCTN1Q14203 1278 aa12.43□□□□□ -0.42
AL355916.3-201ENST00000556347 TAF7Q15545 349 aaPredicted RBP12.43□□□□□ -0.42
AL355916.3-201ENST00000556347 GRIPAP1Q4V328 841 aa12.43□□□□□ -0.42
AL355916.3-201ENST00000556347 NUTM1Q86Y26 1132 aa12.43□□□□□ -0.42
AL355916.3-201ENST00000556347 LARGE2Q8N3Y3 721 aa12.43□□□□□ -0.42
AL355916.3-201ENST00000556347 NGEFQ8N5V2 710 aa12.43□□□□□ -0.42
AL355916.3-201ENST00000556347 DDX21Q9NR30 783 aaKnown RBP eCLIP12.43□□□□□ -0.42
AL355916.3-201ENST00000556347 PCDH10Q9P2E7 1040 aa12.43□□□□□ -0.42
AL355916.3-201ENST00000556347 ECE1P42892 770 aa12.42□□□□□ -0.42
AL355916.3-201ENST00000556347 MNX1P50219 401 aaPredicted RBP12.42□□□□□ -0.42
AL355916.3-201ENST00000556347 GRM1Q13255 1194 aa12.42□□□□□ -0.42
AL355916.3-201ENST00000556347 CRY2Q49AN0 593 aa12.42□□□□□ -0.42
AL355916.3-201ENST00000556347 KIF6Q6ZMV9 814 aa12.42□□□□□ -0.42
AL355916.3-201ENST00000556347 TMX4Q9H1E5 349 aaPredicted RBP12.42□□□□□ -0.42
AL355916.3-201ENST00000556347 DLG5Q8TDM6 1919 aa12.42□□□□□ -0.42
AL355916.3-201ENST00000556347 ERVV-1B6SEH8 477 aa12.41□□□□□ -0.42
AL355916.3-201ENST00000556347 NEFMP07197 916 aa12.41□□□□□ -0.42
AL355916.3-201ENST00000556347 RBM17Q96I25 401 aaKnown RBP12.41□□□□□ -0.42
AL355916.3-201ENST00000556347 PHF12Q96QT6 1004 aa12.41□□□□□ -0.42
AL355916.3-201ENST00000556347 MIS18AQ9NYP9 233 aa12.41□□□□□ -0.42
AL355916.3-201ENST00000556347 ABCC12Q96J65 1359 aa12.41□□□□□ -0.42
AL355916.3-201ENST00000556347 MAP3K15Q6ZN16 1313 aa12.4□□□□□ -0.42
AL355916.3-201ENST00000556347 TCERG1O14776 1098 aaKnown RBP12.4□□□□□ -0.42
AL355916.3-201ENST00000556347 HOXA10P31260 410 aaPredicted RBP12.4□□□□□ -0.42
AL355916.3-201ENST00000556347 EPS15P42566 896 aa12.4□□□□□ -0.42
AL355916.3-201ENST00000556347 USP50Q70EL3 339 aaPredicted RBP12.4□□□□□ -0.42
AL355916.3-201ENST00000556347 NIM1KQ8IY84 436 aa12.4□□□□□ -0.42
AL355916.3-201ENST00000556347 PNISRQ8TF01 805 aaKnown RBP12.4□□□□□ -0.42
AL355916.3-201ENST00000556347 CAPNS2Q96L46 248 aa12.4□□□□□ -0.42
AL355916.3-201ENST00000556347 RRP7AQ9Y3A4 280 aaKnown RBP12.4□□□□□ -0.42
AL355916.3-201ENST00000556347 KDM3BQ7LBC6 1761 aa12.39□□□□□ -0.43
AL355916.3-201ENST00000556347 PPEF1O14829 653 aaPredicted RBP12.39□□□□□ -0.43
AL355916.3-201ENST00000556347 GPTP24298 496 aa12.39□□□□□ -0.43
AL355916.3-201ENST00000556347 SCNN1DP51172 638 aa12.39□□□□□ -0.43
AL355916.3-201ENST00000556347 MLLT1Q03111 559 aaPredicted RBP12.39□□□□□ -0.43
AL355916.3-201ENST00000556347 FMR1Q06787 632 aaKnown RBP eCLIP12.39□□□□□ -0.43
AL355916.3-201ENST00000556347 GPR101Q96P66 508 aaPredicted RBP12.39□□□□□ -0.43
AL355916.3-201ENST00000556347 CRAMP1Q96RY5 1269 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms