RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 UNC13BO14795 1591 aa7.33□□□□□ -1.24
ATXN3-239ENST00000556315 RPGRIP1LQ68CZ1 1315 aa7.32□□□□□ -1.24
ATXN3-239ENST00000556315 CROCC2H7BZ55 1655 aa7.32□□□□□ -1.24
ATXN3-239ENST00000556315 RALGAPBQ86X10 1494 aa7.32□□□□□ -1.24
ATXN3-239ENST00000556315 USP17L8P0C7I0 530 aa7.32□□□□□ -1.24
ATXN3-239ENST00000556315 NBPF20Q3BBV1 942 aa7.32□□□□□ -1.24
ATXN3-239ENST00000556315 CCDC155Q8N6L0 562 aa7.32□□□□□ -1.24
ATXN3-239ENST00000556315 PNMA1Q8ND90 353 aa7.32□□□□□ -1.24
ATXN3-239ENST00000556315 AGBL1Q96MI9 1066 aa7.32□□□□□ -1.24
ATXN3-239ENST00000556315 CCDC9Q9Y3X0 531 aaKnown RBP7.32□□□□□ -1.24
ATXN3-239ENST00000556315 HFM1A2PYH4 1435 aa7.32□□□□□ -1.24
ATXN3-239ENST00000556315 GCC2Q8IWJ2 1684 aa7.32□□□□□ -1.24
ATXN3-239ENST00000556315 SPATA31A3Q5VYP0 1347 aa7.31□□□□□ -1.24
ATXN3-239ENST00000556315 ESPNB1AK53 854 aa7.31□□□□□ -1.24
ATXN3-239ENST00000556315 RFC5P40937 340 aa7.31□□□□□ -1.24
ATXN3-239ENST00000556315 CTSOP43234 321 aaPredicted RBP7.31□□□□□ -1.24
ATXN3-239ENST00000556315 PSME1Q06323 249 aa7.31□□□□□ -1.24
ATXN3-239ENST00000556315 KRT28Q7Z3Y7 464 aa7.31□□□□□ -1.24
ATXN3-239ENST00000556315 XRN1Q8IZH2 1706 aaKnown RBP7.31□□□□□ -1.24
ATXN3-239ENST00000556315 LILRA1O75019 489 aa7.3□□□□□ -1.24
ATXN3-239ENST00000556315 R3HDM1Q15032 1099 aaKnown RBP7.3□□□□□ -1.24
ATXN3-239ENST00000556315 INSM2Q96T92 566 aaPredicted RBP7.3□□□□□ -1.24
ATXN3-239ENST00000556315 TMPRSS4Q9NRS4 437 aa7.3□□□□□ -1.24
ATXN3-239ENST00000556315 SLIT2O94813 1529 aa7.3□□□□□ -1.24
ATXN3-239ENST00000556315 YY1P25490 414 aa7.29□□□□□ -1.24
ATXN3-239ENST00000556315 ADD1P35611 737 aaKnown RBP7.29□□□□□ -1.24
ATXN3-239ENST00000556315 ITGAEP38570 1179 aa7.29□□□□□ -1.24
ATXN3-239ENST00000556315 GSK3AP49840 483 aa7.29□□□□□ -1.24
ATXN3-239ENST00000556315 RELBQ01201 579 aa7.29□□□□□ -1.24
ATXN3-239ENST00000556315 KCNMA1Q12791 1236 aa7.29□□□□□ -1.24
ATXN3-239ENST00000556315 FLIIQ13045 1269 aa7.29□□□□□ -1.24
ATXN3-239ENST00000556315 TMEM259Q4ZIN3 620 aa7.29□□□□□ -1.24
ATXN3-239ENST00000556315 WAPLQ7Z5K2 1190 aa7.29□□□□□ -1.24
ATXN3-239ENST00000556315 KDF1Q8NAX2 398 aaPredicted RBP7.29□□□□□ -1.24
ATXN3-239ENST00000556315 ZNF784Q8NCA9 323 aaPredicted RBP7.29□□□□□ -1.24
ATXN3-239ENST00000556315 RNF217Q8TC41 542 aa7.29□□□□□ -1.24
ATXN3-239ENST00000556315 CNTNAP3BQ96NU0 1288 aa7.29□□□□□ -1.24
ATXN3-239ENST00000556315 COL25A1Q9BXS0 654 aaPredicted RBP7.29□□□□□ -1.24
ATXN3-239ENST00000556315 TRIM34Q9BYJ4 488 aa7.29□□□□□ -1.24
ATXN3-239ENST00000556315 CNTNAP3Q9BZ76 1288 aa7.29□□□□□ -1.24
ATXN3-239ENST00000556315 LAMC1P11047 1609 aa7.29□□□□□ -1.24
ATXN3-239ENST00000556315 PRAG1Q86YV5 1406 aa7.28□□□□□ -1.24
ATXN3-239ENST00000556315 NRXN3Q9Y4C0 1643 aa7.28□□□□□ -1.24
ATXN3-239ENST00000556315 FAM83GA6ND36 823 aa7.28□□□□□ -1.24
ATXN3-239ENST00000556315 ERVH48-1M5A8F1 160 aa7.28□□□□□ -1.24
ATXN3-239ENST00000556315 ADH1AP07327 375 aa7.28□□□□□ -1.24
ATXN3-239ENST00000556315 ITGA6P23229 1130 aa7.28□□□□□ -1.24
ATXN3-239ENST00000556315 DZIP3Q86Y13 1208 aaKnown RBP7.28□□□□□ -1.24
ATXN3-239ENST00000556315 ZNF395Q9H8N7 513 aaPredicted RBP7.28□□□□□ -1.24
ATXN3-239ENST00000556315 STK26Q9P289 416 aa7.28□□□□□ -1.24
ATXN3-239ENST00000556315 MYO5BQ9ULV0 1848 aa7.28□□□□□ -1.24
ATXN3-239ENST00000556315 PXDNQ92626 1479 aa7.28□□□□□ -1.24
ATXN3-239ENST00000556315 E9PCH4 1651 aa7.28□□□□□ -1.24
ATXN3-239ENST00000556315 SENP3-EIF4A1A0A087X0R7 540 aa7.27□□□□□ -1.25
ATXN3-239ENST00000556315 RNFT1Q5M7Z0 435 aa7.27□□□□□ -1.25
ATXN3-239ENST00000556315 BANK1Q8NDB2 785 aa7.27□□□□□ -1.25
ATXN3-239ENST00000556315 SIRT1Q96EB6 747 aa7.27□□□□□ -1.25
ATXN3-239ENST00000556315 POLMQ9NP87 494 aaPredicted RBP7.27□□□□□ -1.25
ATXN3-239ENST00000556315 COL22A1Q8NFW1 1626 aaPredicted RBP7.27□□□□□ -1.25
ATXN3-239ENST00000556315 PTGIRP43119 386 aa7.26□□□□□ -1.25
ATXN3-239ENST00000556315 FOXD4L5Q5VV16 416 aaPredicted RBP7.26□□□□□ -1.25
ATXN3-239ENST00000556315 IQGAP3Q86VI3 1631 aa7.26□□□□□ -1.25
ATXN3-239ENST00000556315 ABCC11Q96J66 1382 aa7.25□□□□□ -1.25
ATXN3-239ENST00000556315 SLURP2P0DP57 97 aa7.25□□□□□ -1.25
ATXN3-239ENST00000556315 RAB15P59190 212 aa7.25□□□□□ -1.25
ATXN3-239ENST00000556315 EZH2Q15910 746 aaKnown RBP7.25□□□□□ -1.25
ATXN3-239ENST00000556315 SV2AQ7L0J3 742 aa7.25□□□□□ -1.25
ATXN3-239ENST00000556315 VWA5B2Q8N398 1253 aa7.25□□□□□ -1.25
ATXN3-239ENST00000556315 CAMKK2Q96RR4 588 aa7.25□□□□□ -1.25
ATXN3-239ENST00000556315 BTG4Q9NY30 223 aa7.25□□□□□ -1.25
ATXN3-239ENST00000556315 NEXMIFQ5QGS0 1516 aa7.25□□□□□ -1.25
ATXN3-239ENST00000556315 CCDC144AA2RUR9 1427 aa7.25□□□□□ -1.25
ATXN3-239ENST00000556315 NAIPQ13075 1403 aa7.25□□□□□ -1.25
ATXN3-239ENST00000556315 GLI3P10071 1580 aa7.25□□□□□ -1.25
ATXN3-239ENST00000556315 SBNO1A3KN83 1393 aa7.24□□□□□ -1.25
ATXN3-239ENST00000556315 LRP5O75197 1615 aa7.24□□□□□ -1.25
ATXN3-239ENST00000556315 NBPF8Q3BBV2 869 aa7.24□□□□□ -1.25
ATXN3-239ENST00000556315 ZNF385CQ66K41 422 aaPredicted RBP7.24□□□□□ -1.25
ATXN3-239ENST00000556315 TMEM132EQ6IEE7 984 aa7.24□□□□□ -1.25
ATXN3-239ENST00000556315 FAM196AQ6ZSG2 479 aa7.24□□□□□ -1.25
ATXN3-239ENST00000556315 ADAMTS8Q9UP79 889 aa7.24□□□□□ -1.25
ATXN3-239ENST00000556315 ADGRF5Q8IZF2 1346 aa7.24□□□□□ -1.25
ATXN3-239ENST00000556315 NALCNQ8IZF0 1738 aa7.24□□□□□ -1.25
ATXN3-239ENST00000556315 ARHGEF10O15013 1369 aa7.23□□□□□ -1.25
ATXN3-239ENST00000556315 EP400Q96L91 3159 aa7.23□□□□□ -1.25
ATXN3-239ENST00000556315 APBA3O96018 575 aa7.23□□□□□ -1.25
ATXN3-239ENST00000556315 FAM182BQ5T319 152 aa7.23□□□□□ -1.25
ATXN3-239ENST00000556315 SPATA31A5Q5VU36 1347 aa7.23□□□□□ -1.25
ATXN3-239ENST00000556315 SPATA31A7Q8IWB4 1347 aa7.23□□□□□ -1.25
ATXN3-239ENST00000556315 PLEKHH1Q9ULM0 1364 aa7.22□□□□□ -1.25
ATXN3-239ENST00000556315 DISP2A7MBM2 1401 aa7.22□□□□□ -1.25
ATXN3-239ENST00000556315 TNS3Q68CZ2 1445 aa7.22□□□□□ -1.25
ATXN3-239ENST00000556315 CDC14CA4D256 554 aa7.22□□□□□ -1.25
ATXN3-239ENST00000556315 ZBBXA8MT70 800 aa7.22□□□□□ -1.25
ATXN3-239ENST00000556315 APBB1O00213 710 aa7.22□□□□□ -1.25
ATXN3-239ENST00000556315 TRIM37O94972 964 aa7.22□□□□□ -1.25
ATXN3-239ENST00000556315 RNF144AP50876 292 aaPredicted RBP7.22□□□□□ -1.25
ATXN3-239ENST00000556315 RGL3Q3MIN7 710 aa7.22□□□□□ -1.25
ATXN3-239ENST00000556315 LYSMD3Q7Z3D4 306 aa7.22□□□□□ -1.25
ATXN3-239ENST00000556315 PPP1R1BQ9UD71 204 aaPredicted RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms