RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 ISCA1Q9BUE6 129 aa19.51■□□□□ 0.71
ACTN1-217ENST00000556203 COL11A2P13942 1736 aaPredicted RBP19.51■□□□□ 0.71
ACTN1-217ENST00000556203 DLEC1Q9Y238 1755 aa19.5■□□□□ 0.71
ACTN1-217ENST00000556203 E9PSI1 815 aa19.5■□□□□ 0.71
ACTN1-217ENST00000556203 TRMT112Q9UI30 125 aaKnown RBP19.5■□□□□ 0.71
ACTN1-217ENST00000556203 CRY2Q49AN0 593 aa19.49■□□□□ 0.71
ACTN1-217ENST00000556203 PRPF40BQ6NWY9 871 aaKnown RBP19.49■□□□□ 0.71
ACTN1-217ENST00000556203 G2E3Q7L622 706 aa19.49■□□□□ 0.71
ACTN1-217ENST00000556203 ZNF219Q9P2Y4 722 aaPredicted RBP19.49■□□□□ 0.71
ACTN1-217ENST00000556203 RIC1Q4ADV7 1423 aa19.49■□□□□ 0.71
ACTN1-217ENST00000556203 RNF123Q5XPI4 1314 aa19.49■□□□□ 0.71
ACTN1-217ENST00000556203 SH3TC1Q8TE82 1336 aa19.49■□□□□ 0.71
ACTN1-217ENST00000556203 C21orf2O43822 256 aa19.48■□□□□ 0.71
ACTN1-217ENST00000556203 SLFN5Q08AF3 891 aa19.48■□□□□ 0.71
ACTN1-217ENST00000556203 SLC10A5Q5PT55 438 aa19.48■□□□□ 0.71
ACTN1-217ENST00000556203 C3orf67Q6ZVT6 689 aa19.48■□□□□ 0.71
ACTN1-217ENST00000556203 ZNF784Q8NCA9 323 aaPredicted RBP19.48■□□□□ 0.71
ACTN1-217ENST00000556203 MYD88Q99836 296 aa19.48■□□□□ 0.71
ACTN1-217ENST00000556203 MAP3K2Q9Y2U5 619 aa19.48■□□□□ 0.71
ACTN1-217ENST00000556203 CHD4Q14839 1912 aa19.48■□□□□ 0.71
ACTN1-217ENST00000556203 TNRC6CQ9HCJ0 1690 aaKnown RBP19.47■□□□□ 0.71
ACTN1-217ENST00000556203 TRIM28Q13263 835 aaKnown RBP19.47■□□□□ 0.71
ACTN1-217ENST00000556203 KSR2Q6VAB6 950 aa19.47■□□□□ 0.71
ACTN1-217ENST00000556203 SYNE4Q8N205 404 aa19.47■□□□□ 0.71
ACTN1-217ENST00000556203 CDCA7LQ96GN5 454 aa19.47■□□□□ 0.71
ACTN1-217ENST00000556203 NLRP3Q96P20 1036 aa19.47■□□□□ 0.71
ACTN1-217ENST00000556203 METTL22Q9BUU2 404 aaPredicted RBP19.47■□□□□ 0.71
ACTN1-217ENST00000556203 ARFGEF1Q9Y6D6 1849 aa19.46■□□□□ 0.71
ACTN1-217ENST00000556203 PI4KAP2A4QPH2 592 aa19.46■□□□□ 0.71
ACTN1-217ENST00000556203 HCLS1P14317 486 aaPredicted RBP19.46■□□□□ 0.71
ACTN1-217ENST00000556203 FLIIQ13045 1269 aa19.46■□□□□ 0.71
ACTN1-217ENST00000556203 PI4KAP1Q8N8J0 262 aa19.46■□□□□ 0.71
ACTN1-217ENST00000556203 RPGRQ92834 1020 aaKnown RBP19.46■□□□□ 0.71
ACTN1-217ENST00000556203 ANKRD36CQ5JPF3 1778 aa19.46■□□□□ 0.71
ACTN1-217ENST00000556203 ADCY9O60503 1353 aa19.45■□□□□ 0.7
ACTN1-217ENST00000556203 ALDH1B1P30837 517 aa19.45■□□□□ 0.7
ACTN1-217ENST00000556203 RASSF7Q02833 373 aa19.45■□□□□ 0.7
ACTN1-217ENST00000556203 FAM89AQ96GI7 184 aa19.45■□□□□ 0.7
ACTN1-217ENST00000556203 FKBP5Q13451 457 aaPredicted RBP19.44■□□□□ 0.7
ACTN1-217ENST00000556203 C9orf131Q5VYM1 1079 aa19.44■□□□□ 0.7
ACTN1-217ENST00000556203 RBM17Q96I25 401 aaKnown RBP19.44■□□□□ 0.7
ACTN1-217ENST00000556203 ARFGEF2Q9Y6D5 1785 aa19.44■□□□□ 0.7
ACTN1-217ENST00000556203 HOXA10P31260 410 aaPredicted RBP19.43■□□□□ 0.7
ACTN1-217ENST00000556203 RTL5Q5HYW3 569 aaPredicted RBP19.43■□□□□ 0.7
ACTN1-217ENST00000556203 SOGA3Q5TF21 947 aa19.43■□□□□ 0.7
ACTN1-217ENST00000556203 CCDC191Q8NCU4 936 aa19.43■□□□□ 0.7
ACTN1-217ENST00000556203 C7orf43Q8WVR3 580 aa19.43■□□□□ 0.7
ACTN1-217ENST00000556203 CWC25Q9NXE8 425 aaPredicted RBP19.43■□□□□ 0.7
ACTN1-217ENST00000556203 NFKBIEO00221 500 aa19.42■□□□□ 0.7
ACTN1-217ENST00000556203 NEXNQ0ZGT2 675 aa19.42■□□□□ 0.7
ACTN1-217ENST00000556203 ZBTB38Q8NAP3 1195 aaPredicted RBP19.42■□□□□ 0.7
ACTN1-217ENST00000556203 RNF181Q9P0P0 153 aa19.42■□□□□ 0.7
ACTN1-217ENST00000556203 IGKV5-2P06315 115 aa19.41■□□□□ 0.7
ACTN1-217ENST00000556203 TRMT2AQ8IZ69 625 aaKnown RBP19.41■□□□□ 0.7
ACTN1-217ENST00000556203 CRAMP1Q96RY5 1269 aa19.41■□□□□ 0.7
ACTN1-217ENST00000556203 SLX4Q8IY92 1834 aa19.41■□□□□ 0.7
ACTN1-217ENST00000556203 IRS4O14654 1257 aaPredicted RBP19.4■□□□□ 0.7
ACTN1-217ENST00000556203 CCDC93Q567U6 631 aa19.4■□□□□ 0.7
ACTN1-217ENST00000556203 OLFM4Q6UX06 510 aa19.4■□□□□ 0.7
ACTN1-217ENST00000556203 DNAAF4Q8WXU2 420 aa19.4■□□□□ 0.7
ACTN1-217ENST00000556203 TAOK3Q9H2K8 898 aa19.4■□□□□ 0.7
ACTN1-217ENST00000556203 PCCAP05165 728 aaPredicted RBP19.39■□□□□ 0.69
ACTN1-217ENST00000556203 LMNB1P20700 586 aa19.39■□□□□ 0.69
ACTN1-217ENST00000556203 PRELPP51888 382 aa19.39■□□□□ 0.69
ACTN1-217ENST00000556203 HNRNPUQ00839 825 aaKnown RBP eCLIP19.39■□□□□ 0.69
ACTN1-217ENST00000556203 CWF19L2Q2TBE0 894 aaKnown RBP19.39■□□□□ 0.69
ACTN1-217ENST00000556203 JARID2Q92833 1246 aaPredicted RBP19.39■□□□□ 0.69
ACTN1-217ENST00000556203 NEURL1BA8MQ27 555 aa19.38■□□□□ 0.69
ACTN1-217ENST00000556203 PPEF1O14829 653 aaPredicted RBP19.38■□□□□ 0.69
ACTN1-217ENST00000556203 ABCC4O15439 1325 aa19.38■□□□□ 0.69
ACTN1-217ENST00000556203 ZNF526Q8TF50 670 aaPredicted RBP19.38■□□□□ 0.69
ACTN1-217ENST00000556203 F6X3S4 739 aa19.37■□□□□ 0.69
ACTN1-217ENST00000556203 DDX46Q7L014 1031 aaKnown RBP19.37■□□□□ 0.69
ACTN1-217ENST00000556203 LTBP3Q9NS15 1303 aa19.36■□□□□ 0.69
ACTN1-217ENST00000556203 HSP90B1P14625 803 aaKnown RBP19.36■□□□□ 0.69
ACTN1-217ENST00000556203 SF3B3Q15393 1217 aaKnown RBP19.36■□□□□ 0.69
ACTN1-217ENST00000556203 RTKN2Q8IZC4 609 aa19.36■□□□□ 0.69
ACTN1-217ENST00000556203 MRPL50Q8N5N7 158 aaKnown RBP19.36■□□□□ 0.69
ACTN1-217ENST00000556203 FKBP4Q02790 459 aaKnown RBP eCLIP19.35■□□□□ 0.69
ACTN1-217ENST00000556203 GRAPQ13588 217 aa19.35■□□□□ 0.69
ACTN1-217ENST00000556203 SLC51AQ86UW1 340 aa19.35■□□□□ 0.69
ACTN1-217ENST00000556203 LINS1Q8NG48 757 aa19.35■□□□□ 0.69
ACTN1-217ENST00000556203 GRAPLQ8TC17 118 aaPredicted RBP19.35■□□□□ 0.69
ACTN1-217ENST00000556203 SSH1Q8WYL5 1049 aa19.35■□□□□ 0.69
ACTN1-217ENST00000556203 GPBP1L1Q9HC44 474 aaPredicted RBP19.35■□□□□ 0.69
ACTN1-217ENST00000556203 GCKRQ14397 625 aa19.34■□□□□ 0.69
ACTN1-217ENST00000556203 CC2D2BQ6DHV5 1058 aa19.34■□□□□ 0.69
ACTN1-217ENST00000556203 BCL2L13Q9BXK5 485 aa19.34■□□□□ 0.69
ACTN1-217ENST00000556203 CACNA1SQ13698 1873 aa19.34■□□□□ 0.69
ACTN1-217ENST00000556203 CDHR2Q9BYE9 1310 aa19.33■□□□□ 0.69
ACTN1-217ENST00000556203 PDE8AO60658 829 aa19.33■□□□□ 0.68
ACTN1-217ENST00000556203 BBOX1O75936 387 aa19.33■□□□□ 0.68
ACTN1-217ENST00000556203 ATP6V0A2Q9Y487 856 aa19.33■□□□□ 0.68
ACTN1-217ENST00000556203 DDX60Q8IY21 1712 aaKnown RBP19.32■□□□□ 0.68
ACTN1-217ENST00000556203 H7C1W4 665 aa19.32■□□□□ 0.68
ACTN1-217ENST00000556203 CT47B1P0C2W7 299 aaPredicted RBP19.32■□□□□ 0.68
ACTN1-217ENST00000556203 ALDH1L2Q3SY69 923 aa19.32■□□□□ 0.68
ACTN1-217ENST00000556203 BEND3Q5T5X7 828 aa19.32■□□□□ 0.68
ACTN1-217ENST00000556203 UBE3BQ7Z3V4 1068 aa19.32■□□□□ 0.68
ACTN1-217ENST00000556203 TMX4Q9H1E5 349 aaPredicted RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms