RNA–Protein interactions for RNA: ENST00000555955.3

SIX1-205, Transcript of SIX homeobox 1, humanhuman

TSL 2

Gene SIX1, Length 2,844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-205ENST00000555955 CLSTN2Q9H4D0 955 aa17.09■□□□□ 0.33
SIX1-205ENST00000555955 ADGRF5Q8IZF2 1346 aa17.09■□□□□ 0.33
SIX1-205ENST00000555955 HOMER1Q86YM7 354 aa17.09■□□□□ 0.33
SIX1-205ENST00000555955 CCDC83Q8IWF9 413 aa17.09■□□□□ 0.33
SIX1-205ENST00000555955 KIAA1210Q9ULL0 1709 aa17.08■□□□□ 0.33
SIX1-205ENST00000555955 CAVIN2O95810 425 aa17.08■□□□□ 0.33
SIX1-205ENST00000555955 TPM1P09493 284 aa17.08■□□□□ 0.33
SIX1-205ENST00000555955 GSCP56915 257 aaPredicted RBP17.08■□□□□ 0.33
SIX1-205ENST00000555955 KRT24Q2M2I5 525 aa17.08■□□□□ 0.33
SIX1-205ENST00000555955 CCDC158Q5M9N0 1113 aa17.08■□□□□ 0.33
SIX1-205ENST00000555955 FOXR1Q6PIV2 292 aa17.08■□□□□ 0.33
SIX1-205ENST00000555955 FERMT3Q86UX7 667 aa17.08■□□□□ 0.33
SIX1-205ENST00000555955 TTC14Q96N46 770 aa17.08■□□□□ 0.33
SIX1-205ENST00000555955 IQCB1Q15051 598 aa17.08■□□□□ 0.32
SIX1-205ENST00000555955 SWT1Q5T5J6 900 aaKnown RBP17.08■□□□□ 0.32
SIX1-205ENST00000555955 MCTP2Q6DN12 878 aa17.08■□□□□ 0.32
SIX1-205ENST00000555955 SUGP1Q8IWZ8 645 aaKnown RBP17.08■□□□□ 0.32
SIX1-205ENST00000555955 SUFUQ9UMX1 484 aa17.08■□□□□ 0.32
SIX1-205ENST00000555955 TRAK1Q9UPV9 953 aa17.08■□□□□ 0.32
SIX1-205ENST00000555955 ARFGAP3Q9NP61 516 aa17.07■□□□□ 0.32
SIX1-205ENST00000555955 DNAI1Q9UI46 699 aa17.07■□□□□ 0.32
SIX1-205ENST00000555955 NSD2O96028 1365 aa17.07■□□□□ 0.32
SIX1-205ENST00000555955 EFCAB8A8MWE9 144 aa17.07■□□□□ 0.32
SIX1-205ENST00000555955 TADA3O75528 432 aa17.07■□□□□ 0.32
SIX1-205ENST00000555955 C8orf58Q8NAV2 365 aa17.07■□□□□ 0.32
SIX1-205ENST00000555955 MBIPQ9NS73 344 aa17.07■□□□□ 0.32
SIX1-205ENST00000555955 EFCAB6Q5THR3 1501 aa17.07■□□□□ 0.32
SIX1-205ENST00000555955 BECN2A8MW95 431 aa17.06■□□□□ 0.32
SIX1-205ENST00000555955 DIAPH1O60610 1272 aaKnown RBP17.06■□□□□ 0.32
SIX1-205ENST00000555955 NR1I2O75469 434 aa17.06■□□□□ 0.32
SIX1-205ENST00000555955 LARGE1O95461 756 aa17.06■□□□□ 0.32
SIX1-205ENST00000555955 GSDMDP57764 484 aa17.06■□□□□ 0.32
SIX1-205ENST00000555955 GNAI1P63096 354 aa17.06■□□□□ 0.32
SIX1-205ENST00000555955 CARD6Q9BX69 1037 aa17.06■□□□□ 0.32
SIX1-205ENST00000555955 USP32Q8NFA0 1604 aa17.06■□□□□ 0.32
SIX1-205ENST00000555955 EVCP57679 992 aa17.06■□□□□ 0.32
SIX1-205ENST00000555955 IL25Q9H293 177 aa17.06■□□□□ 0.32
SIX1-205ENST00000555955 PDRG1Q9NUG6 133 aa17.06■□□□□ 0.32
SIX1-205ENST00000555955 HMMRO75330 724 aa17.06■□□□□ 0.32
SIX1-205ENST00000555955 URI1O94763 535 aaPredicted RBP17.06■□□□□ 0.32
SIX1-205ENST00000555955 CORO7P57737 925 aa17.06■□□□□ 0.32
SIX1-205ENST00000555955 ETF1P62495 437 aaKnown RBP17.06■□□□□ 0.32
SIX1-205ENST00000555955 MMS22LQ6ZRQ5 1243 aa17.06■□□□□ 0.32
SIX1-205ENST00000555955 EGFL6Q8IUX8 553 aa17.06■□□□□ 0.32
SIX1-205ENST00000555955 MEIS3Q99687 375 aa17.06■□□□□ 0.32
SIX1-205ENST00000555955 TTC21BQ7Z4L5 1316 aa17.05■□□□□ 0.32
SIX1-205ENST00000555955 H3BQF6 201 aa17.05■□□□□ 0.32
SIX1-205ENST00000555955 TUBB4AP04350 444 aa17.05■□□□□ 0.32
SIX1-205ENST00000555955 MAP2K2P36507 400 aa17.05■□□□□ 0.32
SIX1-205ENST00000555955 SRRTQ9BXP5 876 aaKnown RBP17.05■□□□□ 0.32
SIX1-205ENST00000555955 FUT8Q9BYC5 575 aa17.05■□□□□ 0.32
SIX1-205ENST00000555955 TFIP11Q9UBB9 837 aaKnown RBP17.05■□□□□ 0.32
SIX1-205ENST00000555955 SNX14Q9Y5W7 946 aa17.05■□□□□ 0.32
SIX1-205ENST00000555955 NPHP3Q7Z494 1330 aa17.05■□□□□ 0.32
SIX1-205ENST00000555955 CAMSAP1Q5T5Y3 1602 aa17.05■□□□□ 0.32
SIX1-205ENST00000555955 PSDA5PKW4 1024 aaPredicted RBP17.05■□□□□ 0.32
SIX1-205ENST00000555955 GNAI3P08754 354 aa17.05■□□□□ 0.32
SIX1-205ENST00000555955 SPATA32Q96LK8 384 aa17.05■□□□□ 0.32
SIX1-205ENST00000555955 GGNBP2Q9H3C7 697 aa17.05■□□□□ 0.32
SIX1-205ENST00000555955 KIF1CO43896 1103 aaKnown RBP17.04■□□□□ 0.32
SIX1-205ENST00000555955 PRKAR2BP31323 418 aa17.04■□□□□ 0.32
SIX1-205ENST00000555955 C11orf57Q6ZUT1 292 aaPredicted RBP17.04■□□□□ 0.32
SIX1-205ENST00000555955 ANKRD20A12PQ8NF67 263 aa17.04■□□□□ 0.32
SIX1-205ENST00000555955 VPS18Q9P253 973 aa17.04■□□□□ 0.32
SIX1-205ENST00000555955 CFAP65Q6ZU64 1925 aaKnown RBP17.04■□□□□ 0.32
SIX1-205ENST00000555955 ATP6V1AP38606 617 aa17.04■□□□□ 0.32
SIX1-205ENST00000555955 TDO2P48775 406 aa17.04■□□□□ 0.32
SIX1-205ENST00000555955 SATB1Q01826 763 aa17.04■□□□□ 0.32
SIX1-205ENST00000555955 BICD2Q8TD16 824 aa17.04■□□□□ 0.32
SIX1-205ENST00000555955 CEP89Q96ST8 783 aa17.04■□□□□ 0.32
SIX1-205ENST00000555955 STK26Q9P289 416 aa17.04■□□□□ 0.32
SIX1-205ENST00000555955 ABCC3O15438 1527 aa17.03■□□□□ 0.32
SIX1-205ENST00000555955 TRPM2O94759 1503 aa17.03■□□□□ 0.32
SIX1-205ENST00000555955 CPA1P15085 419 aa17.03■□□□□ 0.32
SIX1-205ENST00000555955 GNL2Q13823 731 aaKnown RBP17.03■□□□□ 0.32
SIX1-205ENST00000555955 LARP1BQ659C4 914 aaKnown RBP17.03■□□□□ 0.32
SIX1-205ENST00000555955 SCAND2PQ9GZW5 306 aaPredicted RBP17.03■□□□□ 0.32
SIX1-205ENST00000555955 ZSCAN16Q9H4T2 348 aaPredicted RBP17.03■□□□□ 0.32
SIX1-205ENST00000555955 MED4Q9NPJ6 270 aa17.03■□□□□ 0.32
SIX1-205ENST00000555955 FCHSD2O94868 740 aa17.03■□□□□ 0.32
SIX1-205ENST00000555955 UNC5CLQ8IV45 518 aa17.03■□□□□ 0.32
SIX1-205ENST00000555955 COL3A1P02461 1466 aaPredicted RBP17.03■□□□□ 0.32
SIX1-205ENST00000555955 SMC2O95347 1197 aa17.02■□□□□ 0.32
SIX1-205ENST00000555955 LRRFIP1Q32MZ4 808 aaKnown RBP17.02■□□□□ 0.32
SIX1-205ENST00000555955 RASEFQ8IZ41 740 aa17.02■□□□□ 0.32
SIX1-205ENST00000555955 PHLPP2Q6ZVD8 1323 aa17.02■□□□□ 0.32
SIX1-205ENST00000555955 TTC21AQ8NDW8 1320 aa17.02■□□□□ 0.32
SIX1-205ENST00000555955 TTLL5Q6EMB2 1281 aa17.02■□□□□ 0.32
SIX1-205ENST00000555955 GPR161Q8N6U8 529 aaKnown RBP17.02■□□□□ 0.32
SIX1-205ENST00000555955 STAG3Q9UJ98 1225 aa17.02■□□□□ 0.31
SIX1-205ENST00000555955 MSH6P52701 1360 aa17.01■□□□□ 0.31
SIX1-205ENST00000555955 RPS6KA5O75582 802 aa17.01■□□□□ 0.31
SIX1-205ENST00000555955 CDC37L1Q7L3B6 337 aa17.01■□□□□ 0.31
SIX1-205ENST00000555955 OSBPL5Q9H0X9 879 aaPredicted RBP17.01■□□□□ 0.31
SIX1-205ENST00000555955 HYPKQ9NX55 129 aa17.01■□□□□ 0.31
SIX1-205ENST00000555955 MKRN1Q9UHC7 482 aaKnown RBP17.01■□□□□ 0.31
SIX1-205ENST00000555955 NEURL4Q96JN8 1562 aa17.01■□□□□ 0.31
SIX1-205ENST00000555955 EPB41L2O43491 1005 aaKnown RBP17.01■□□□□ 0.31
SIX1-205ENST00000555955 SALL3Q9BXA9 1300 aa17■□□□□ 0.31
SIX1-205ENST00000555955 LEO1Q8WVC0 666 aaPredicted RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms