RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 GPTP24298 496 aa16.59■□□□□ 0.25
HNRNPC-221ENST00000555883 CRAMP1Q96RY5 1269 aa16.59■□□□□ 0.25
HNRNPC-221ENST00000555883 DDX21Q9NR30 783 aaKnown RBP eCLIP16.59■□□□□ 0.25
HNRNPC-221ENST00000555883 IQCA1LA6NCM1 817 aa16.58■□□□□ 0.24
HNRNPC-221ENST00000555883 NEUROD2Q15784 382 aa16.58■□□□□ 0.24
HNRNPC-221ENST00000555883 PROSER3Q2NL68 480 aa16.58■□□□□ 0.24
HNRNPC-221ENST00000555883 SLC10A5Q5PT55 438 aa16.58■□□□□ 0.24
HNRNPC-221ENST00000555883 RPGRQ92834 1020 aaKnown RBP16.58■□□□□ 0.24
HNRNPC-221ENST00000555883 CFAP44Q96MT7 982 aa16.58■□□□□ 0.24
HNRNPC-221ENST00000555883 COPS6Q7L5N1 327 aa16.57■□□□□ 0.24
HNRNPC-221ENST00000555883 UTP14AQ9BVJ6 771 aaKnown RBP16.57■□□□□ 0.24
HNRNPC-221ENST00000555883 DDNO94850 711 aaPredicted RBP16.56■□□□□ 0.24
HNRNPC-221ENST00000555883 IARSP41252 1262 aaKnown RBP16.56■□□□□ 0.24
HNRNPC-221ENST00000555883 KLRG1Q96E93 195 aa16.56■□□□□ 0.24
HNRNPC-221ENST00000555883 RBM17Q96I25 401 aaKnown RBP16.56■□□□□ 0.24
HNRNPC-221ENST00000555883 NLRP3Q96P20 1036 aa16.56■□□□□ 0.24
HNRNPC-221ENST00000555883 ZNF277Q9NRM2 450 aaPredicted RBP16.56■□□□□ 0.24
HNRNPC-221ENST00000555883 FZD9O00144 591 aa16.55■□□□□ 0.24
HNRNPC-221ENST00000555883 CALD1Q05682 793 aaKnown RBP16.55■□□□□ 0.24
HNRNPC-221ENST00000555883 JMYQ8N9B5 988 aa16.55■□□□□ 0.24
HNRNPC-221ENST00000555883 XAGE3Q8WTP9 111 aa16.55■□□□□ 0.24
HNRNPC-221ENST00000555883 DBF4Q9UBU7 674 aaPredicted RBP16.55■□□□□ 0.24
HNRNPC-221ENST00000555883 ANKRD36CQ5JPF3 1778 aa16.54■□□□□ 0.24
HNRNPC-221ENST00000555883 ANXA1P04083 346 aa16.54■□□□□ 0.24
HNRNPC-221ENST00000555883 ZNF853P0CG23 659 aa16.54■□□□□ 0.24
HNRNPC-221ENST00000555883 TCIRG1Q13488 830 aa16.54■□□□□ 0.24
HNRNPC-221ENST00000555883 HDGFL1Q5TGJ6 251 aa16.54■□□□□ 0.24
HNRNPC-221ENST00000555883 OLFM4Q6UX06 510 aa16.54■□□□□ 0.24
HNRNPC-221ENST00000555883 NLRP10Q86W26 655 aa16.54■□□□□ 0.24
HNRNPC-221ENST00000555883 SYNE4Q8N205 404 aa16.54■□□□□ 0.24
HNRNPC-221ENST00000555883 SCN4AP35499 1836 aa16.54■□□□□ 0.24
HNRNPC-221ENST00000555883 KRT24Q2M2I5 525 aa16.53■□□□□ 0.24
HNRNPC-221ENST00000555883 CHADLQ6NUI6 762 aa16.53■□□□□ 0.24
HNRNPC-221ENST00000555883 PLBD2Q8NHP8 589 aa16.53■□□□□ 0.24
HNRNPC-221ENST00000555883 VPS33BQ9H267 617 aa16.53■□□□□ 0.24
HNRNPC-221ENST00000555883 IFT57Q9NWB7 429 aa16.53■□□□□ 0.24
HNRNPC-221ENST00000555883 CHPF2Q9P2E5 772 aa16.53■□□□□ 0.24
HNRNPC-221ENST00000555883 PPEF1O14829 653 aaPredicted RBP16.52■□□□□ 0.24
HNRNPC-221ENST00000555883 GPC2Q8N158 579 aa16.52■□□□□ 0.24
HNRNPC-221ENST00000555883 JDP2Q8WYK2 163 aa16.52■□□□□ 0.24
HNRNPC-221ENST00000555883 MBIPQ9NS73 344 aa16.52■□□□□ 0.24
HNRNPC-221ENST00000555883 HYPKQ9NX55 129 aa16.52■□□□□ 0.24
HNRNPC-221ENST00000555883 LAS1LQ9Y4W2 734 aaKnown RBP16.52■□□□□ 0.24
HNRNPC-221ENST00000555883 SH3TC1Q8TE82 1336 aa16.51■□□□□ 0.23
HNRNPC-221ENST00000555883 ZNF541Q9H0D2 1346 aa16.51■□□□□ 0.23
HNRNPC-221ENST00000555883 GNAI1P63096 354 aa16.51■□□□□ 0.23
HNRNPC-221ENST00000555883 AIMP1Q12904 312 aaKnown RBP16.51■□□□□ 0.23
HNRNPC-221ENST00000555883 C3orf67Q6ZVT6 689 aa16.51■□□□□ 0.23
HNRNPC-221ENST00000555883 LDHDQ86WU2 507 aa16.51■□□□□ 0.23
HNRNPC-221ENST00000555883 NECTIN2Q92692 538 aa16.51■□□□□ 0.23
HNRNPC-221ENST00000555883 TAF1DQ9H5J8 278 aaPredicted RBP16.51■□□□□ 0.23
HNRNPC-221ENST00000555883 ATP6V0A2Q9Y487 856 aa16.51■□□□□ 0.23
HNRNPC-221ENST00000555883 PCNTO95613 3336 aa16.51■□□□□ 0.23
HNRNPC-221ENST00000555883 APAF1O14727 1248 aa16.5■□□□□ 0.23
HNRNPC-221ENST00000555883 BBOX1O75936 387 aa16.5■□□□□ 0.23
HNRNPC-221ENST00000555883 HTRA3P83110 453 aa16.5■□□□□ 0.23
HNRNPC-221ENST00000555883 DUSP27Q5VZP5 1158 aa16.5■□□□□ 0.23
HNRNPC-221ENST00000555883 ANKRD13DQ6ZTN6 518 aa16.5■□□□□ 0.23
HNRNPC-221ENST00000555883 CHMP4AQ9BY43 222 aa16.5■□□□□ 0.23
HNRNPC-221ENST00000555883 TMX4Q9H1E5 349 aaPredicted RBP16.5■□□□□ 0.23
HNRNPC-221ENST00000555883 ABCC4O15439 1325 aa16.49■□□□□ 0.23
HNRNPC-221ENST00000555883 ZEB1P37275 1124 aaPredicted RBP16.49■□□□□ 0.23
HNRNPC-221ENST00000555883 TRIM28Q13263 835 aaKnown RBP16.49■□□□□ 0.23
HNRNPC-221ENST00000555883 IFFO2Q5TF58 517 aa16.49■□□□□ 0.23
HNRNPC-221ENST00000555883 PNMA8AQ86V59 439 aaPredicted RBP16.49■□□□□ 0.23
HNRNPC-221ENST00000555883 ISCA1Q9BUE6 129 aa16.49■□□□□ 0.23
HNRNPC-221ENST00000555883 RTFDC1Q9BY42 306 aaPredicted RBP16.49■□□□□ 0.23
HNRNPC-221ENST00000555883 TRMT112Q9UI30 125 aaKnown RBP16.49■□□□□ 0.23
HNRNPC-221ENST00000555883 HACL1Q9UJ83 578 aa16.49■□□□□ 0.23
HNRNPC-221ENST00000555883 TMC4Q7Z404 712 aa16.48■□□□□ 0.23
HNRNPC-221ENST00000555883 SUPT20HQ8NEM7 779 aa16.48■□□□□ 0.23
HNRNPC-221ENST00000555883 CREBZFQ9NS37 354 aa16.48■□□□□ 0.23
HNRNPC-221ENST00000555883 COL4A5P29400 1685 aa16.47■□□□□ 0.23
HNRNPC-221ENST00000555883 ADAMTSL1Q8N6G6 1762 aa16.47■□□□□ 0.23
HNRNPC-221ENST00000555883 POTEIP0CG38 1075 aa16.47■□□□□ 0.23
HNRNPC-221ENST00000555883 POTEJP0CG39 1038 aa16.47■□□□□ 0.23
HNRNPC-221ENST00000555883 EIF6P56537 245 aaKnown RBP16.47■□□□□ 0.23
HNRNPC-221ENST00000555883 NCBP3Q53F19 620 aaKnown RBP16.47■□□□□ 0.23
HNRNPC-221ENST00000555883 SP8Q8IXZ3 490 aa16.47■□□□□ 0.23
HNRNPC-221ENST00000555883 LARGE2Q8N3Y3 721 aa16.47■□□□□ 0.23
HNRNPC-221ENST00000555883 PASKQ96RG2 1323 aa16.46■□□□□ 0.23
HNRNPC-221ENST00000555883 EPHX2P34913 555 aa16.46■□□□□ 0.23
HNRNPC-221ENST00000555883 GRAPQ13588 217 aa16.46■□□□□ 0.23
HNRNPC-221ENST00000555883 CCDC27Q2M243 656 aa16.46■□□□□ 0.23
HNRNPC-221ENST00000555883 DDX46Q7L014 1031 aaKnown RBP16.46■□□□□ 0.23
HNRNPC-221ENST00000555883 GRAPLQ8TC17 118 aaPredicted RBP16.46■□□□□ 0.23
HNRNPC-221ENST00000555883 HCLS1P14317 486 aaPredicted RBP16.45■□□□□ 0.22
HNRNPC-221ENST00000555883 SF3B3Q15393 1217 aaKnown RBP16.45■□□□□ 0.22
HNRNPC-221ENST00000555883 LAMB2P55268 1798 aa16.45■□□□□ 0.22
HNRNPC-221ENST00000555883 NIM1KQ8IY84 436 aa16.44■□□□□ 0.22
HNRNPC-221ENST00000555883 LRRC37AA6NMS7 1700 aa16.43■□□□□ 0.22
HNRNPC-221ENST00000555883 PPIP5K2O43314 1243 aa16.43■□□□□ 0.22
HNRNPC-221ENST00000555883 ITGBL1O95965 494 aaPredicted RBP16.43■□□□□ 0.22
HNRNPC-221ENST00000555883 HSP90B1P14625 803 aaKnown RBP16.43■□□□□ 0.22
HNRNPC-221ENST00000555883 GOLGA2Q08379 1002 aa16.43■□□□□ 0.22
HNRNPC-221ENST00000555883 DPP8Q6V1X1 898 aaPredicted RBP16.43■□□□□ 0.22
HNRNPC-221ENST00000555883 MPNDQ8N594 471 aa16.43■□□□□ 0.22
HNRNPC-221ENST00000555883 DDX60Q8IY21 1712 aaKnown RBP16.42■□□□□ 0.22
HNRNPC-221ENST00000555883 LMOD1P29536 600 aaPredicted RBP16.42■□□□□ 0.22
HNRNPC-221ENST00000555883 SCNN1DP51172 638 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms