RNA–Protein interactions for RNA: ENST00000555872.5

EFCAB11-208, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-208ENST00000555872 ANKRD36BQ8N2N9 1353 aa12.19□□□□□ -0.46
EFCAB11-208ENST00000555872 PPIP5K1Q6PFW1 1433 aa12.19□□□□□ -0.46
EFCAB11-208ENST00000555872 DIP2AQ14689 1571 aa12.19□□□□□ -0.46
EFCAB11-208ENST00000555872 NAP1L1P55209 391 aaKnown RBP12.19□□□□□ -0.46
EFCAB11-208ENST00000555872 ERCC4Q92889 916 aaPredicted RBP12.19□□□□□ -0.46
EFCAB11-208ENST00000555872 ATP2B1P20020 1258 aa12.18□□□□□ -0.46
EFCAB11-208ENST00000555872 CD151P48509 253 aa12.18□□□□□ -0.46
EFCAB11-208ENST00000555872 SYCP1Q15431 976 aa12.18□□□□□ -0.46
EFCAB11-208ENST00000555872 CCDC181Q5TID7 509 aa12.18□□□□□ -0.46
EFCAB11-208ENST00000555872 USP48Q86UV5 1035 aa12.18□□□□□ -0.46
EFCAB11-208ENST00000555872 ARPC5LQ9BPX5 153 aa12.18□□□□□ -0.46
EFCAB11-208ENST00000555872 ST7Q9NRC1 585 aa12.18□□□□□ -0.46
EFCAB11-208ENST00000555872 PLEKHG1Q9ULL1 1385 aa12.18□□□□□ -0.46
EFCAB11-208ENST00000555872 AP5Z1O43299 807 aa12.18□□□□□ -0.46
EFCAB11-208ENST00000555872 EPB41L2O43491 1005 aaKnown RBP12.18□□□□□ -0.46
EFCAB11-208ENST00000555872 U2AF1L5P0DN76 240 aaPredicted RBP12.18□□□□□ -0.46
EFCAB11-208ENST00000555872 ATP6V1AP38606 617 aa12.18□□□□□ -0.46
EFCAB11-208ENST00000555872 U2AF1Q01081 240 aaKnown RBP eCLIP12.18□□□□□ -0.46
EFCAB11-208ENST00000555872 E2F4Q16254 413 aa12.18□□□□□ -0.46
EFCAB11-208ENST00000555872 TRIM66O15016 1216 aa12.17□□□□□ -0.46
EFCAB11-208ENST00000555872 CEBPAP49715 358 aaPredicted RBP12.17□□□□□ -0.46
EFCAB11-208ENST00000555872 MTHFSP49914 203 aa12.17□□□□□ -0.46
EFCAB11-208ENST00000555872 NEXNQ0ZGT2 675 aa12.17□□□□□ -0.46
EFCAB11-208ENST00000555872 NUTM2DQ5VT03 806 aaPredicted RBP12.17□□□□□ -0.46
EFCAB11-208ENST00000555872 TMX3Q96JJ7 454 aa12.17□□□□□ -0.46
EFCAB11-208ENST00000555872 SMTNL1A8MU46 457 aa12.17□□□□□ -0.46
EFCAB11-208ENST00000555872 C10orf67Q8IYJ2 551 aa12.17□□□□□ -0.46
EFCAB11-208ENST00000555872 RANBP17Q9H2T7 1088 aaKnown RBP12.17□□□□□ -0.46
EFCAB11-208ENST00000555872 BIN2Q9UBW5 565 aaPredicted RBP12.17□□□□□ -0.46
EFCAB11-208ENST00000555872 PES1O00541 588 aaKnown RBP12.17□□□□□ -0.46
EFCAB11-208ENST00000555872 U2SURPO15042 1029 aaKnown RBP12.17□□□□□ -0.46
EFCAB11-208ENST00000555872 CCDC183Q5T5S1 534 aa12.17□□□□□ -0.46
EFCAB11-208ENST00000555872 INTS3Q68E01 1043 aaKnown RBP12.17□□□□□ -0.46
EFCAB11-208ENST00000555872 TMEM132EQ6IEE7 984 aa12.17□□□□□ -0.46
EFCAB11-208ENST00000555872 CCDC112Q8NEF3 446 aa12.17□□□□□ -0.46
EFCAB11-208ENST00000555872 RMI1Q9H9A7 625 aa12.17□□□□□ -0.46
EFCAB11-208ENST00000555872 MED14O60244 1454 aa12.16□□□□□ -0.46
EFCAB11-208ENST00000555872 TECPR2O15040 1411 aa12.16□□□□□ -0.46
EFCAB11-208ENST00000555872 ABCC11Q96J66 1382 aa12.16□□□□□ -0.46
EFCAB11-208ENST00000555872 TOM1O60784 492 aa12.16□□□□□ -0.46
EFCAB11-208ENST00000555872 NEK4P51957 841 aa12.16□□□□□ -0.46
EFCAB11-208ENST00000555872 TRIM74Q86UV6 250 aa12.16□□□□□ -0.46
EFCAB11-208ENST00000555872 TRIM73Q86UV7 250 aa12.16□□□□□ -0.46
EFCAB11-208ENST00000555872 THEMISQ8N1K5 641 aaPredicted RBP12.16□□□□□ -0.46
EFCAB11-208ENST00000555872 TBC1D22AQ8WUA7 517 aa12.16□□□□□ -0.46
EFCAB11-208ENST00000555872 TRAK1Q9UPV9 953 aa12.16□□□□□ -0.46
EFCAB11-208ENST00000555872 GOLGA6L6A8MZA4 724 aa12.16□□□□□ -0.46
EFCAB11-208ENST00000555872 PTGS1P23219 599 aa12.16□□□□□ -0.46
EFCAB11-208ENST00000555872 KMT5BQ4FZB7 885 aa12.16□□□□□ -0.46
EFCAB11-208ENST00000555872 PLEKHM2Q8IWE5 1019 aa12.16□□□□□ -0.46
EFCAB11-208ENST00000555872 SIRT2Q8IXJ6 389 aa12.16□□□□□ -0.46
EFCAB11-208ENST00000555872 ZCRB1Q8TBF4 217 aaKnown RBP12.16□□□□□ -0.46
EFCAB11-208ENST00000555872 IFT57Q9NWB7 429 aa12.16□□□□□ -0.46
EFCAB11-208ENST00000555872 SHPRHQ149N8 1683 aa12.16□□□□□ -0.46
EFCAB11-208ENST00000555872 ZBTB7BO15156 539 aaPredicted RBP12.15□□□□□ -0.46
EFCAB11-208ENST00000555872 TRDNQ13061 729 aa12.15□□□□□ -0.46
EFCAB11-208ENST00000555872 CCDC125Q86Z20 511 aa12.15□□□□□ -0.46
EFCAB11-208ENST00000555872 ZNF396Q96N95 335 aaPredicted RBP12.15□□□□□ -0.46
EFCAB11-208ENST00000555872 POLKQ9UBT6 870 aa12.15□□□□□ -0.46
EFCAB11-208ENST00000555872 NFATC2IPQ8NCF5 419 aa12.15□□□□□ -0.47
EFCAB11-208ENST00000555872 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.15□□□□□ -0.47
EFCAB11-208ENST00000555872 V9GYY5 206 aaPredicted RBP12.15□□□□□ -0.47
EFCAB11-208ENST00000555872 TULP4Q9NRJ4 1543 aa12.14□□□□□ -0.47
EFCAB11-208ENST00000555872 MX1P20591 662 aa12.14□□□□□ -0.47
EFCAB11-208ENST00000555872 TTC22Q5TAA0 569 aa12.14□□□□□ -0.47
EFCAB11-208ENST00000555872 C16orf71Q8IYS4 520 aaPredicted RBP12.14□□□□□ -0.47
EFCAB11-208ENST00000555872 DEF6Q9H4E7 631 aa12.14□□□□□ -0.47
EFCAB11-208ENST00000555872 LRMPQ12912 555 aa12.14□□□□□ -0.47
EFCAB11-208ENST00000555872 GIMAP6Q6P9H5 292 aa12.14□□□□□ -0.47
EFCAB11-208ENST00000555872 ZNF397Q8NF99 534 aaPredicted RBP12.14□□□□□ -0.47
EFCAB11-208ENST00000555872 TATDN2Q93075 761 aa12.14□□□□□ -0.47
EFCAB11-208ENST00000555872 CFAP53Q96M91 514 aa12.14□□□□□ -0.47
EFCAB11-208ENST00000555872 FAM135BQ49AJ0 1406 aa12.14□□□□□ -0.47
EFCAB11-208ENST00000555872 ADAMTS13Q76LX8 1427 aa12.14□□□□□ -0.47
EFCAB11-208ENST00000555872 CCDC196A0A1B0GTZ2 297 aa12.13□□□□□ -0.47
EFCAB11-208ENST00000555872 EID1Q9Y6B2 187 aa12.13□□□□□ -0.47
EFCAB11-208ENST00000555872 OATP04181 439 aa12.13□□□□□ -0.47
EFCAB11-208ENST00000555872 RBM6P78332 1123 aaKnown RBP12.13□□□□□ -0.47
EFCAB11-208ENST00000555872 JAKMIP3Q5VZ66 844 aa12.13□□□□□ -0.47
EFCAB11-208ENST00000555872 NAIF1Q69YI7 327 aaPredicted RBP12.13□□□□□ -0.47
EFCAB11-208ENST00000555872 KRBA2Q6ZNG9 492 aa12.13□□□□□ -0.47
EFCAB11-208ENST00000555872 THOC1Q96FV9 657 aaKnown RBP12.13□□□□□ -0.47
EFCAB11-208ENST00000555872 GOPCQ9HD26 462 aa12.13□□□□□ -0.47
EFCAB11-208ENST00000555872 ZNF446Q9NWS9 450 aa12.13□□□□□ -0.47
EFCAB11-208ENST00000555872 MYO1CO00159 1063 aa12.12□□□□□ -0.47
EFCAB11-208ENST00000555872 MAP2K2P36507 400 aa12.12□□□□□ -0.47
EFCAB11-208ENST00000555872 RTF1Q92541 710 aaKnown RBP12.12□□□□□ -0.47
EFCAB11-208ENST00000555872 ETAA1Q9NY74 926 aa12.12□□□□□ -0.47
EFCAB11-208ENST00000555872 USP32Q8NFA0 1604 aa12.12□□□□□ -0.47
EFCAB11-208ENST00000555872 EVC2Q86UK5 1308 aa12.12□□□□□ -0.47
EFCAB11-208ENST00000555872 ANKRD18BA2A2Z9 1011 aa12.11□□□□□ -0.47
EFCAB11-208ENST00000555872 SDSP20132 328 aa12.11□□□□□ -0.47
EFCAB11-208ENST00000555872 CYP2C19P33261 490 aa12.11□□□□□ -0.47
EFCAB11-208ENST00000555872 CCDC186Q7Z3E2 898 aa12.11□□□□□ -0.47
EFCAB11-208ENST00000555872 CXorf38Q8TB03 319 aa12.11□□□□□ -0.47
EFCAB11-208ENST00000555872 TEX13AQ9BXU3 409 aaPredicted RBP12.11□□□□□ -0.47
EFCAB11-208ENST00000555872 KAT6BQ8WYB5 2073 aa12.11□□□□□ -0.47
EFCAB11-208ENST00000555872 KINO60870 393 aaKnown RBP12.11□□□□□ -0.47
EFCAB11-208ENST00000555872 REC8O95072 547 aa12.11□□□□□ -0.47
EFCAB11-208ENST00000555872 FBXO38Q6PIJ6 1188 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms