RNA–Protein interactions for RNA: ENST00000555722.5

RBM23-219, Transcript of RNA binding motif protein 23, human

TSL 3

Gene RBM23, Length 602 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM23-219	ENST00000555722	SLC10A5	Q5PT55	438 aa		13.73	□□□□□ -0.21
RBM23-219	ENST00000555722	OLFM4	Q6UX06	510 aa		13.73	□□□□□ -0.21
RBM23-219	ENST00000555722	KLRG1	Q96E93	195 aa		13.73	□□□□□ -0.21
RBM23-219	ENST00000555722	ADAMTS8	Q9UP79	889 aa		13.73	□□□□□ -0.21
RBM23-219	ENST00000555722	TRPM7	Q96QT4	1865 aa		13.73	□□□□□ -0.21
RBM23-219	ENST00000555722	FAM177B	A6PVY3	158 aa		13.72	□□□□□ -0.21
RBM23-219	ENST00000555722	FZD9	O00144	591 aa		13.72	□□□□□ -0.21
RBM23-219	ENST00000555722	DDN	O94850	711 aa	Predicted RBP	13.72	□□□□□ -0.21
RBM23-219	ENST00000555722	HOXB7	P09629	217 aa		13.72	□□□□□ -0.21
RBM23-219	ENST00000555722	HTRA3	P83110	453 aa		13.72	□□□□□ -0.21
RBM23-219	ENST00000555722	CC2D2B	Q6DHV5	1058 aa		13.72	□□□□□ -0.21
RBM23-219	ENST00000555722	CRAMP1	Q96RY5	1269 aa		13.72	□□□□□ -0.21
RBM23-219	ENST00000555722	MYH3	P11055	1940 aa		13.71	□□□□□ -0.21
RBM23-219	ENST00000555722	GPT	P24298	496 aa		13.71	□□□□□ -0.21
RBM23-219	ENST00000555722	GRIPAP1	Q4V328	841 aa		13.71	□□□□□ -0.21
RBM23-219	ENST00000555722	CCDC146	Q8IYE0	955 aa		13.71	□□□□□ -0.21
RBM23-219	ENST00000555722	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
RBM23-219	ENST00000555722	ANXA1	P04083	346 aa		13.7	□□□□□ -0.22
RBM23-219	ENST00000555722	ZNF853	P0CG23	659 aa		13.7	□□□□□ -0.22
RBM23-219	ENST00000555722	EIF2S2	P20042	333 aa	Known RBP	13.7	□□□□□ -0.22
RBM23-219	ENST00000555722	GTF2E1	P29083	439 aa	Predicted RBP	13.7	□□□□□ -0.22
RBM23-219	ENST00000555722	IFFO2	Q5TF58	517 aa		13.7	□□□□□ -0.22
RBM23-219	ENST00000555722	C3orf67	Q6ZVT6	689 aa		13.7	□□□□□ -0.22
RBM23-219	ENST00000555722	PPP1R42	Q7Z4L9	355 aa		13.7	□□□□□ -0.22
RBM23-219	ENST00000555722	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.7	□□□□□ -0.22
RBM23-219	ENST00000555722	ZNF541	Q9H0D2	1346 aa		13.69	□□□□□ -0.22
RBM23-219	ENST00000555722	IARS	P41252	1262 aa	Known RBP	13.69	□□□□□ -0.22
RBM23-219	ENST00000555722	WDR43	Q15061	677 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
RBM23-219	ENST00000555722	KRT24	Q2M2I5	525 aa		13.69	□□□□□ -0.22
RBM23-219	ENST00000555722	COPS6	Q7L5N1	327 aa		13.69	□□□□□ -0.22
RBM23-219	ENST00000555722	SYNE4	Q8N205	404 aa		13.69	□□□□□ -0.22
RBM23-219	ENST00000555722	CFAP44	Q96MT7	982 aa		13.69	□□□□□ -0.22
RBM23-219	ENST00000555722	DUOX1	Q9NRD9	1551 aa		13.69	□□□□□ -0.22
RBM23-219	ENST00000555722	PSME4	Q14997	1843 aa		13.69	□□□□□ -0.22
RBM23-219	ENST00000555722	IQCA1L	A6NCM1	817 aa		13.68	□□□□□ -0.22
RBM23-219	ENST00000555722	POTEI	P0CG38	1075 aa		13.68	□□□□□ -0.22
RBM23-219	ENST00000555722	POTEJ	P0CG39	1038 aa		13.68	□□□□□ -0.22
RBM23-219	ENST00000555722	TCIRG1	Q13488	830 aa		13.68	□□□□□ -0.22
RBM23-219	ENST00000555722	HSP90AB3P	Q58FF7	597 aa		13.68	□□□□□ -0.22
RBM23-219	ENST00000555722	CHADL	Q6NUI6	762 aa		13.68	□□□□□ -0.22
RBM23-219	ENST00000555722	NLRP10	Q86W26	655 aa		13.68	□□□□□ -0.22
RBM23-219	ENST00000555722	XAGE3	Q8WTP9	111 aa		13.68	□□□□□ -0.22
RBM23-219	ENST00000555722	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.68	□□□□□ -0.22
RBM23-219	ENST00000555722	PASK	Q96RG2	1323 aa		13.67	□□□□□ -0.22
RBM23-219	ENST00000555722	COL4A1	P02462	1669 aa		13.67	□□□□□ -0.22
RBM23-219	ENST00000555722	NEUROD2	Q15784	382 aa		13.67	□□□□□ -0.22
RBM23-219	ENST00000555722	SLC51A	Q86UW1	340 aa		13.67	□□□□□ -0.22
RBM23-219	ENST00000555722	RPGR	Q92834	1020 aa	Known RBP	13.67	□□□□□ -0.22
RBM23-219	ENST00000555722	RBM17	Q96I25	401 aa	Known RBP	13.67	□□□□□ -0.22
RBM23-219	ENST00000555722	UTP14A	Q9BVJ6	771 aa	Known RBP	13.67	□□□□□ -0.22
RBM23-219	ENST00000555722	POLR2A	P24928	1970 aa	Known RBP	13.67	□□□□□ -0.22
RBM23-219	ENST00000555722	LDHD	Q86WU2	507 aa		13.66	□□□□□ -0.22
RBM23-219	ENST00000555722	GPC2	Q8N158	579 aa		13.66	□□□□□ -0.22
RBM23-219	ENST00000555722	NLRP3	Q96P20	1036 aa		13.66	□□□□□ -0.22
RBM23-219	ENST00000555722	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.66	□□□□□ -0.22
RBM23-219	ENST00000555722	VPS33B	Q9H267	617 aa		13.66	□□□□□ -0.22
RBM23-219	ENST00000555722	CHPF2	Q9P2E5	772 aa		13.66	□□□□□ -0.22
RBM23-219	ENST00000555722	ABCC4	O15439	1325 aa		13.65	□□□□□ -0.22
RBM23-219	ENST00000555722	PPEF1	O14829	653 aa	Predicted RBP	13.65	□□□□□ -0.22
RBM23-219	ENST00000555722	PLBD2	Q8NHP8	589 aa		13.65	□□□□□ -0.22
RBM23-219	ENST00000555722	ISCA1	Q9BUE6	129 aa		13.65	□□□□□ -0.22
RBM23-219	ENST00000555722	MBIP	Q9NS73	344 aa		13.65	□□□□□ -0.22
RBM23-219	ENST00000555722	DBF4	Q9UBU7	674 aa	Predicted RBP	13.65	□□□□□ -0.22
RBM23-219	ENST00000555722	ATP6V0A2	Q9Y487	856 aa		13.65	□□□□□ -0.22
RBM23-219	ENST00000555722	ITGBL1	O95965	494 aa	Predicted RBP	13.64	□□□□□ -0.23
RBM23-219	ENST00000555722	TRIM28	Q13263	835 aa	Known RBP	13.64	□□□□□ -0.23
RBM23-219	ENST00000555722	HDGFL1	Q5TGJ6	251 aa		13.64	□□□□□ -0.23
RBM23-219	ENST00000555722	NECTIN2	Q92692	538 aa		13.64	□□□□□ -0.23
RBM23-219	ENST00000555722	CREBZF	Q9NS37	354 aa		13.64	□□□□□ -0.23
RBM23-219	ENST00000555722	IFT57	Q9NWB7	429 aa		13.64	□□□□□ -0.23
RBM23-219	ENST00000555722	SH3TC1	Q8TE82	1336 aa		13.64	□□□□□ -0.23
RBM23-219	ENST00000555722	SCN9A	Q15858	1988 aa		13.63	□□□□□ -0.23
RBM23-219	ENST00000555722	BBOX1	O75936	387 aa		13.63	□□□□□ -0.23
RBM23-219	ENST00000555722	AIMP1	Q12904	312 aa	Known RBP	13.63	□□□□□ -0.23
RBM23-219	ENST00000555722	ANKRD13D	Q6ZTN6	518 aa		13.63	□□□□□ -0.23
RBM23-219	ENST00000555722	HYPK	Q9NX55	129 aa		13.63	□□□□□ -0.23
RBM23-219	ENST00000555722	HACL1	Q9UJ83	578 aa		13.63	□□□□□ -0.23
RBM23-219	ENST00000555722	THSD7B	Q9C0I4	1608 aa		13.63	□□□□□ -0.23
RBM23-219	ENST00000555722	ZNF646	O15015	1829 aa	Predicted RBP	13.62	□□□□□ -0.23
RBM23-219	ENST00000555722	APAF1	O14727	1248 aa		13.62	□□□□□ -0.23
RBM23-219	ENST00000555722	EPHX2	P34913	555 aa		13.62	□□□□□ -0.23
RBM23-219	ENST00000555722	DUSP27	Q5VZP5	1158 aa		13.62	□□□□□ -0.23
RBM23-219	ENST00000555722	SP8	Q8IXZ3	490 aa		13.62	□□□□□ -0.23
RBM23-219	ENST00000555722	JDP2	Q8WYK2	163 aa		13.62	□□□□□ -0.23
RBM23-219	ENST00000555722	LAS1L	Q9Y4W2	734 aa	Known RBP	13.62	□□□□□ -0.23
RBM23-219	ENST00000555722	SPEF2	Q9C093	1822 aa		13.62	□□□□□ -0.23
RBM23-219	ENST00000555722	HCLS1	P14317	486 aa	Predicted RBP	13.61	□□□□□ -0.23
RBM23-219	ENST00000555722	SCNN1D	P51172	638 aa		13.61	□□□□□ -0.23
RBM23-219	ENST00000555722	PNMA8A	Q86V59	439 aa	Predicted RBP	13.61	□□□□□ -0.23
RBM23-219	ENST00000555722	TRMT112	Q9UI30	125 aa	Known RBP	13.61	□□□□□ -0.23
RBM23-219	ENST00000555722	GNAI1	P63096	354 aa		13.6	□□□□□ -0.23
RBM23-219	ENST00000555722	CALD1	Q05682	793 aa	Known RBP	13.6	□□□□□ -0.23
RBM23-219	ENST00000555722	GRAP	Q13588	217 aa		13.6	□□□□□ -0.23
RBM23-219	ENST00000555722	SF3B3	Q15393	1217 aa	Known RBP	13.6	□□□□□ -0.23
RBM23-219	ENST00000555722	TMC4	Q7Z404	712 aa		13.6	□□□□□ -0.23
RBM23-219	ENST00000555722	GRAPL	Q8TC17	118 aa	Predicted RBP	13.6	□□□□□ -0.23
RBM23-219	ENST00000555722	CNTNAP1	P78357	1384 aa		13.59	□□□□□ -0.23
RBM23-219	ENST00000555722	EIF6	P56537	245 aa	Known RBP	13.59	□□□□□ -0.23
RBM23-219	ENST00000555722	CCDC27	Q2M243	656 aa		13.59	□□□□□ -0.23
RBM23-219	ENST00000555722	NCBP3	Q53F19	620 aa	Known RBP	13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms