RNA–Protein interactions for RNA: ENST00000555608.5

EFCAB11-207, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2

Gene EFCAB11, Length 644 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-207ENST00000555608 KDM2BQ8NHM5 1336 aa19.28■□□□□ 0.68
EFCAB11-207ENST00000555608 CRY2Q49AN0 593 aa19.28■□□□□ 0.68
EFCAB11-207ENST00000555608 CCDC93Q567U6 631 aa19.28■□□□□ 0.68
EFCAB11-207ENST00000555608 SLC51AQ86UW1 340 aa19.28■□□□□ 0.68
EFCAB11-207ENST00000555608 C7orf43Q8WVR3 580 aa19.28■□□□□ 0.68
EFCAB11-207ENST00000555608 TSR2Q969E8 191 aaKnown RBP19.28■□□□□ 0.68
EFCAB11-207ENST00000555608 DBF4Q9UBU7 674 aaPredicted RBP19.28■□□□□ 0.68
EFCAB11-207ENST00000555608 LTBP3Q9NS15 1303 aa19.27■□□□□ 0.68
EFCAB11-207ENST00000555608 ZC3H4Q9UPT8 1303 aaKnown RBP19.27■□□□□ 0.68
EFCAB11-207ENST00000555608 SOGA3Q5TF21 947 aa19.27■□□□□ 0.68
EFCAB11-207ENST00000555608 C8orf58Q8NAV2 365 aa19.27■□□□□ 0.68
EFCAB11-207ENST00000555608 UTP14AQ9BVJ6 771 aaKnown RBP19.27■□□□□ 0.68
EFCAB11-207ENST00000555608 TOMM70O94826 608 aa19.26■□□□□ 0.67
EFCAB11-207ENST00000555608 HSP90AB3PQ58FF7 597 aa19.26■□□□□ 0.67
EFCAB11-207ENST00000555608 NLRP10Q86W26 655 aa19.26■□□□□ 0.67
EFCAB11-207ENST00000555608 RPGRQ92834 1020 aaKnown RBP19.26■□□□□ 0.67
EFCAB11-207ENST00000555608 RRAGCQ9HB90 399 aa19.26■□□□□ 0.67
EFCAB11-207ENST00000555608 ALDH1B1P30837 517 aa19.25■□□□□ 0.67
EFCAB11-207ENST00000555608 TCIRG1Q13488 830 aa19.25■□□□□ 0.67
EFCAB11-207ENST00000555608 WWC1Q8IX03 1113 aa19.25■□□□□ 0.67
EFCAB11-207ENST00000555608 SYNE4Q8N205 404 aa19.25■□□□□ 0.67
EFCAB11-207ENST00000555608 SALL2Q9Y467 1007 aaPredicted RBP19.25■□□□□ 0.67
EFCAB11-207ENST00000555608 WDR90Q96KV7 1748 aa19.25■□□□□ 0.67
EFCAB11-207ENST00000555608 TAF1P21675 1872 aa19.24■□□□□ 0.67
EFCAB11-207ENST00000555608 TSPYL6Q8N831 410 aa19.24■□□□□ 0.67
EFCAB11-207ENST00000555608 PLBD2Q8NHP8 589 aa19.24■□□□□ 0.67
EFCAB11-207ENST00000555608 PHAXQ9H814 394 aaKnown RBP19.24■□□□□ 0.67
EFCAB11-207ENST00000555608 HYPKQ9NX55 129 aa19.24■□□□□ 0.67
EFCAB11-207ENST00000555608 SNED1Q8TER0 1413 aa19.24■□□□□ 0.67
EFCAB11-207ENST00000555608 GLTPD2A6NH11 291 aa19.23■□□□□ 0.67
EFCAB11-207ENST00000555608 ATP5J2-PTCD1G3V325 749 aa19.23■□□□□ 0.67
EFCAB11-207ENST00000555608 FKBP4Q02790 459 aaKnown RBP eCLIP19.23■□□□□ 0.67
EFCAB11-207ENST00000555608 CCDC27Q2M243 656 aa19.23■□□□□ 0.67
EFCAB11-207ENST00000555608 ANKRD13DQ6ZTN6 518 aa19.23■□□□□ 0.67
EFCAB11-207ENST00000555608 ZNF277Q9NRM2 450 aaPredicted RBP19.23■□□□□ 0.67
EFCAB11-207ENST00000555608 TRMT112Q9UI30 125 aaKnown RBP19.23■□□□□ 0.67
EFCAB11-207ENST00000555608 TCERG1O14776 1098 aaKnown RBP19.22■□□□□ 0.67
EFCAB11-207ENST00000555608 HCLS1P14317 486 aaPredicted RBP19.22■□□□□ 0.67
EFCAB11-207ENST00000555608 C16orf71Q8IYS4 520 aaPredicted RBP19.22■□□□□ 0.67
EFCAB11-207ENST00000555608 RBM17Q96I25 401 aaKnown RBP19.22■□□□□ 0.67
EFCAB11-207ENST00000555608 PPEF1O14829 653 aaPredicted RBP19.21■□□□□ 0.67
EFCAB11-207ENST00000555608 HOXA10P31260 410 aaPredicted RBP19.21■□□□□ 0.67
EFCAB11-207ENST00000555608 FAM9BQ8IZU0 186 aa19.21■□□□□ 0.67
EFCAB11-207ENST00000555608 NLRP3Q96P20 1036 aa19.21■□□□□ 0.67
EFCAB11-207ENST00000555608 ABCC4O15439 1325 aa19.21■□□□□ 0.67
EFCAB11-207ENST00000555608 RNF123Q5XPI4 1314 aa19.21■□□□□ 0.67
EFCAB11-207ENST00000555608 APLP1P51693 650 aa19.2■□□□□ 0.66
EFCAB11-207ENST00000555608 SLC10A5Q5PT55 438 aa19.2■□□□□ 0.66
EFCAB11-207ENST00000555608 ISCA1Q9BUE6 129 aa19.2■□□□□ 0.66
EFCAB11-207ENST00000555608 COL4A1P02462 1669 aa19.2■□□□□ 0.66
EFCAB11-207ENST00000555608 COL4A5P29400 1685 aa19.2■□□□□ 0.66
EFCAB11-207ENST00000555608 SH3TC1Q8TE82 1336 aa19.2■□□□□ 0.66
EFCAB11-207ENST00000555608 GOLGA2Q08379 1002 aa19.19■□□□□ 0.66
EFCAB11-207ENST00000555608 RIC3Q7Z5B4 369 aa19.19■□□□□ 0.66
EFCAB11-207ENST00000555608 RTKN2Q8IZC4 609 aa19.19■□□□□ 0.66
EFCAB11-207ENST00000555608 RBM46Q8TBY0 533 aaKnown RBP19.19■□□□□ 0.66
EFCAB11-207ENST00000555608 CRAMP1Q96RY5 1269 aa19.19■□□□□ 0.66
EFCAB11-207ENST00000555608 RTL5Q5HYW3 569 aaPredicted RBP19.18■□□□□ 0.66
EFCAB11-207ENST00000555608 CCDC30Q5VVM6 783 aa19.18■□□□□ 0.66
EFCAB11-207ENST00000555608 FANCIQ9NVI1 1328 aa19.18■□□□□ 0.66
EFCAB11-207ENST00000555608 DDNO94850 711 aaPredicted RBP19.17■□□□□ 0.66
EFCAB11-207ENST00000555608 IARSP41252 1262 aaKnown RBP19.17■□□□□ 0.66
EFCAB11-207ENST00000555608 DPY19L2Q6NUT2 758 aa19.17■□□□□ 0.66
EFCAB11-207ENST00000555608 FAM89AQ96GI7 184 aa19.17■□□□□ 0.66
EFCAB11-207ENST00000555608 MYD88Q99836 296 aa19.17■□□□□ 0.66
EFCAB11-207ENST00000555608 IL16Q14005 1332 aa19.17■□□□□ 0.66
EFCAB11-207ENST00000555608 ZNF541Q9H0D2 1346 aa19.17■□□□□ 0.66
EFCAB11-207ENST00000555608 LRRC37AA6NMS7 1700 aa19.17■□□□□ 0.66
EFCAB11-207ENST00000555608 POTECB2RU33 542 aa19.16■□□□□ 0.66
EFCAB11-207ENST00000555608 TWISTNBQ3B726 338 aaPredicted RBP19.16■□□□□ 0.66
EFCAB11-207ENST00000555608 VEGFAP15692 232 aaPredicted RBP19.15■□□□□ 0.66
EFCAB11-207ENST00000555608 HTRA3P83110 453 aa19.15■□□□□ 0.66
EFCAB11-207ENST00000555608 PSMD1Q99460 953 aa19.15■□□□□ 0.66
EFCAB11-207ENST00000555608 NCBP3Q53F19 620 aaKnown RBP19.13■□□□□ 0.65
EFCAB11-207ENST00000555608 CC2D2BQ6DHV5 1058 aa19.13■□□□□ 0.65
EFCAB11-207ENST00000555608 DDX46Q7L014 1031 aaKnown RBP19.13■□□□□ 0.65
EFCAB11-207ENST00000555608 STK31Q9BXU1 1019 aa19.13■□□□□ 0.65
EFCAB11-207ENST00000555608 SCN4AP35499 1836 aa19.13■□□□□ 0.65
EFCAB11-207ENST00000555608 DUOX1Q9NRD9 1551 aa19.12■□□□□ 0.65
EFCAB11-207ENST00000555608 FSTL1Q12841 308 aa19.12■□□□□ 0.65
EFCAB11-207ENST00000555608 GRAPQ13588 217 aa19.12■□□□□ 0.65
EFCAB11-207ENST00000555608 G2E3Q7L622 706 aa19.12■□□□□ 0.65
EFCAB11-207ENST00000555608 DNAJC5GQ8N7S2 189 aa19.12■□□□□ 0.65
EFCAB11-207ENST00000555608 GRAPLQ8TC17 118 aaPredicted RBP19.12■□□□□ 0.65
EFCAB11-207ENST00000555608 JARID2Q92833 1246 aaPredicted RBP19.12■□□□□ 0.65
EFCAB11-207ENST00000555608 SPINK5Q9NQ38 1064 aaPredicted RBP19.12■□□□□ 0.65
EFCAB11-207ENST00000555608 MAP3K2Q9Y2U5 619 aa19.12■□□□□ 0.65
EFCAB11-207ENST00000555608 ATP6V0A2Q9Y487 856 aa19.12■□□□□ 0.65
EFCAB11-207ENST00000555608 IRS4O14654 1257 aaPredicted RBP19.11■□□□□ 0.65
EFCAB11-207ENST00000555608 DDX58O95786 925 aaKnown RBP19.11■□□□□ 0.65
EFCAB11-207ENST00000555608 TRIM28Q13263 835 aaKnown RBP19.11■□□□□ 0.65
EFCAB11-207ENST00000555608 IFFO2Q5TF58 517 aa19.11■□□□□ 0.65
EFCAB11-207ENST00000555608 WDR63Q8IWG1 891 aa19.11■□□□□ 0.65
EFCAB11-207ENST00000555608 SMC1BQ8NDV3 1235 aa19.11■□□□□ 0.65
EFCAB11-207ENST00000555608 METTL22Q9BUU2 404 aaPredicted RBP19.11■□□□□ 0.65
EFCAB11-207ENST00000555608 SPEF2Q9C093 1822 aa19.1■□□□□ 0.65
EFCAB11-207ENST00000555608 EXOSC9Q06265 439 aaKnown RBP19.1■□□□□ 0.65
EFCAB11-207ENST00000555608 LTBP1Q14766 1721 aa19.1■□□□□ 0.65
EFCAB11-207ENST00000555608 CACNA1FO60840 1977 aa19.1■□□□□ 0.65
EFCAB11-207ENST00000555608 MYH3P11055 1940 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms