RNA–Protein interactions for RNA: ENST00000555604.1

PRKCH-217, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-217ENST00000555604 NEURL1BA8MQ27 555 aa8.36□□□□□ -1.07
PRKCH-217ENST00000555604 H0YIN7 160 aa8.36□□□□□ -1.07
PRKCH-217ENST00000555604 TCERG1O14776 1098 aaKnown RBP8.36□□□□□ -1.07
PRKCH-217ENST00000555604 NTSR2O95665 410 aa8.36□□□□□ -1.07
PRKCH-217ENST00000555604 PCCAP05165 728 aaPredicted RBP8.36□□□□□ -1.07
PRKCH-217ENST00000555604 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.36□□□□□ -1.07
PRKCH-217ENST00000555604 NLRP3Q96P20 1036 aa8.36□□□□□ -1.07
PRKCH-217ENST00000555604 MYD88Q99836 296 aa8.36□□□□□ -1.07
PRKCH-217ENST00000555604 SRCIN1Q9C0H9 1055 aa8.36□□□□□ -1.07
PRKCH-217ENST00000555604 RCAN3Q9UKA8 241 aa8.36□□□□□ -1.07
PRKCH-217ENST00000555604 NOB1Q9ULX3 412 aaKnown RBP8.36□□□□□ -1.07
PRKCH-217ENST00000555604 PXDNLA1KZ92 1463 aa8.36□□□□□ -1.07
PRKCH-217ENST00000555604 CDHR2Q9BYE9 1310 aa8.35□□□□□ -1.07
PRKCH-217ENST00000555604 ATP5J2-PTCD1G3V325 749 aa8.35□□□□□ -1.07
PRKCH-217ENST00000555604 IGKV5-2P06315 115 aa8.35□□□□□ -1.07
PRKCH-217ENST00000555604 GPTP24298 496 aa8.35□□□□□ -1.07
PRKCH-217ENST00000555604 ALDH1B1P30837 517 aa8.35□□□□□ -1.07
PRKCH-217ENST00000555604 GCKRQ14397 625 aa8.35□□□□□ -1.07
PRKCH-217ENST00000555604 CRY2Q49AN0 593 aa8.35□□□□□ -1.07
PRKCH-217ENST00000555604 GRIPAP1Q4V328 841 aa8.35□□□□□ -1.07
PRKCH-217ENST00000555604 BEND3Q5T5X7 828 aa8.35□□□□□ -1.07
PRKCH-217ENST00000555604 ZKSCAN2Q63HK3 967 aa8.35□□□□□ -1.07
PRKCH-217ENST00000555604 STYK1Q6J9G0 422 aa8.35□□□□□ -1.07
PRKCH-217ENST00000555604 ATF7IPQ6VMQ6 1270 aa8.35□□□□□ -1.07
PRKCH-217ENST00000555604 CNKSR1Q969H4 720 aa8.35□□□□□ -1.07
PRKCH-217ENST00000555604 NRXN2Q9P2S2 1712 aa8.34□□□□□ -1.07
PRKCH-217ENST00000555604 H7C1W4 665 aa8.34□□□□□ -1.07
PRKCH-217ENST00000555604 SRGNP10124 158 aa8.34□□□□□ -1.07
PRKCH-217ENST00000555604 NPR1P16066 1061 aa8.34□□□□□ -1.07
PRKCH-217ENST00000555604 HOXA10P31260 410 aaPredicted RBP8.34□□□□□ -1.07
PRKCH-217ENST00000555604 SLC4A10Q6U841 1118 aa8.34□□□□□ -1.07
PRKCH-217ENST00000555604 MASTLQ96GX5 879 aa8.34□□□□□ -1.07
PRKCH-217ENST00000555604 YTHDC1Q96MU7 727 aaKnown RBP8.34□□□□□ -1.07
PRKCH-217ENST00000555604 BCL2L13Q9BXK5 485 aa8.34□□□□□ -1.07
PRKCH-217ENST00000555604 CHMP4BQ9H444 224 aaKnown RBP8.34□□□□□ -1.07
PRKCH-217ENST00000555604 PIM2Q9P1W9 311 aa8.34□□□□□ -1.07
PRKCH-217ENST00000555604 UTYO14607 1347 aa8.33□□□□□ -1.08
PRKCH-217ENST00000555604 GRM8O00222 908 aa8.33□□□□□ -1.08
PRKCH-217ENST00000555604 IRS4O14654 1257 aaPredicted RBP8.33□□□□□ -1.08
PRKCH-217ENST00000555604 GRIN3BO60391 1043 aa8.33□□□□□ -1.08
PRKCH-217ENST00000555604 PDE8AO60658 829 aa8.33□□□□□ -1.08
PRKCH-217ENST00000555604 BCAR3O75815 825 aa8.33□□□□□ -1.08
PRKCH-217ENST00000555604 SF3B3Q15393 1217 aaKnown RBP8.33□□□□□ -1.08
PRKCH-217ENST00000555604 ERFEQ4G0M1 354 aa8.33□□□□□ -1.08
PRKCH-217ENST00000555604 SOGA3Q5TF21 947 aa8.33□□□□□ -1.08
PRKCH-217ENST00000555604 INTS3Q68E01 1043 aaKnown RBP8.33□□□□□ -1.08
PRKCH-217ENST00000555604 TMC4Q7Z404 712 aa8.33□□□□□ -1.08
PRKCH-217ENST00000555604 C2CD5Q86YS7 1000 aa8.33□□□□□ -1.08
PRKCH-217ENST00000555604 RPGRQ92834 1020 aaKnown RBP8.33□□□□□ -1.08
PRKCH-217ENST00000555604 RBM17Q96I25 401 aaKnown RBP8.33□□□□□ -1.08
PRKCH-217ENST00000555604 PLA2G12BQ9BX93 195 aa8.33□□□□□ -1.08
PRKCH-217ENST00000555604 C9orf78Q9NZ63 289 aaPredicted RBP8.33□□□□□ -1.08
PRKCH-217ENST00000555604 NUP98P52948 1817 aa8.33□□□□□ -1.08
PRKCH-217ENST00000555604 ABCC4O15439 1325 aa8.32□□□□□ -1.08
PRKCH-217ENST00000555604 FAM177BA6PVY3 158 aa8.32□□□□□ -1.08
PRKCH-217ENST00000555604 F6X3S4 739 aa8.32□□□□□ -1.08
PRKCH-217ENST00000555604 BBOX1O75936 387 aa8.32□□□□□ -1.08
PRKCH-217ENST00000555604 TRIM27P14373 513 aa8.32□□□□□ -1.08
PRKCH-217ENST00000555604 PDE3AQ14432 1141 aa8.32□□□□□ -1.08
PRKCH-217ENST00000555604 CWF19L2Q2TBE0 894 aaKnown RBP8.32□□□□□ -1.08
PRKCH-217ENST00000555604 CCDC152Q4G0S7 254 aa8.32□□□□□ -1.08
PRKCH-217ENST00000555604 DALRD3Q5D0E6 543 aaKnown RBP8.32□□□□□ -1.08
PRKCH-217ENST00000555604 CC2D2BQ6DHV5 1058 aa8.32□□□□□ -1.08
PRKCH-217ENST00000555604 NUTM1Q86Y26 1132 aa8.32□□□□□ -1.08
PRKCH-217ENST00000555604 FTSJ3Q8IY81 847 aaKnown RBP8.32□□□□□ -1.08
PRKCH-217ENST00000555604 KLHL34Q8N239 644 aa8.32□□□□□ -1.08
PRKCH-217ENST00000555604 TTLL6Q8N841 843 aa8.32□□□□□ -1.08
PRKCH-217ENST00000555604 FRAT1Q92837 279 aaPredicted RBP8.32□□□□□ -1.08
PRKCH-217ENST00000555604 FAM89AQ96GI7 184 aa8.32□□□□□ -1.08
PRKCH-217ENST00000555604 CRAMP1Q96RY5 1269 aa8.32□□□□□ -1.08
PRKCH-217ENST00000555604 TMX4Q9H1E5 349 aaPredicted RBP8.32□□□□□ -1.08
PRKCH-217ENST00000555604 ARFGEF2Q9Y6D5 1785 aa8.32□□□□□ -1.08
PRKCH-217ENST00000555604 KIF13BQ9NQT8 1826 aa8.31□□□□□ -1.08
PRKCH-217ENST00000555604 A0A0G2JLW4 131 aa8.31□□□□□ -1.08
PRKCH-217ENST00000555604 GNAI3P08754 354 aa8.31□□□□□ -1.08
PRKCH-217ENST00000555604 DPEP1P16444 411 aa8.31□□□□□ -1.08
PRKCH-217ENST00000555604 KCNA3P22001 575 aa8.31□□□□□ -1.08
PRKCH-217ENST00000555604 DDX46Q7L014 1031 aaKnown RBP8.31□□□□□ -1.08
PRKCH-217ENST00000555604 DZIP1LQ8IYY4 767 aaKnown RBP8.31□□□□□ -1.08
PRKCH-217ENST00000555604 RTL9Q8NET4 1388 aa8.31□□□□□ -1.08
PRKCH-217ENST00000555604 ANKRD36CQ5JPF3 1778 aa8.3□□□□□ -1.08
PRKCH-217ENST00000555604 CSF1RP07333 972 aa8.3□□□□□ -1.08
PRKCH-217ENST00000555604 CASP7P55210 303 aa8.3□□□□□ -1.08
PRKCH-217ENST00000555604 CTSWP56202 376 aa8.3□□□□□ -1.08
PRKCH-217ENST00000555604 UBE3BQ7Z3V4 1068 aa8.3□□□□□ -1.08
PRKCH-217ENST00000555604 NLGN2Q8NFZ4 835 aa8.3□□□□□ -1.08
PRKCH-217ENST00000555604 ZNF622Q969S3 477 aaKnown RBP eCLIP8.3□□□□□ -1.08
PRKCH-217ENST00000555604 USP44Q9H0E7 712 aa8.3□□□□□ -1.08
PRKCH-217ENST00000555604 ABCC12Q96J65 1359 aa8.3□□□□□ -1.08
PRKCH-217ENST00000555604 HCLS1P14317 486 aaPredicted RBP8.29□□□□□ -1.08
PRKCH-217ENST00000555604 GRAPQ13588 217 aa8.29□□□□□ -1.08
PRKCH-217ENST00000555604 GPR162Q16538 588 aa8.29□□□□□ -1.08
PRKCH-217ENST00000555604 RTKN2Q8IZC4 609 aa8.29□□□□□ -1.08
PRKCH-217ENST00000555604 TTLL11Q8NHH1 800 aa8.29□□□□□ -1.08
PRKCH-217ENST00000555604 GRAPLQ8TC17 118 aaPredicted RBP8.29□□□□□ -1.08
PRKCH-217ENST00000555604 CDC5LQ99459 802 aaKnown RBP8.29□□□□□ -1.08
PRKCH-217ENST00000555604 AFDNP55196 1824 aaKnown RBP8.29□□□□□ -1.08
PRKCH-217ENST00000555604 SRCAPQ6ZRS2 3230 aa8.28□□□□□ -1.08
PRKCH-217ENST00000555604 UBTFL1P0CB47 393 aaPredicted RBP8.28□□□□□ -1.08
PRKCH-217ENST00000555604 CHRNA5P30532 468 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms