RNA–Protein interactions for RNA: ENST00000555314.1

TMEM253-205, Transcript of transmembrane protein 253, humanhuman

TSL 3

Gene TMEM253, Length 605 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-205ENST00000555314 CNTROBQ8N137 903 aa16.62■□□□□ 0.25
TMEM253-205ENST00000555314 MAP2K1Q02750 393 aaPredicted RBP16.6■□□□□ 0.25
TMEM253-205ENST00000555314 CNGB1Q14028 1251 aaPredicted RBP16.6■□□□□ 0.25
TMEM253-205ENST00000555314 OLFM4Q6UX06 510 aa16.6■□□□□ 0.25
TMEM253-205ENST00000555314 CRAMP1Q96RY5 1269 aa16.6■□□□□ 0.25
TMEM253-205ENST00000555314 VPS33BQ9H267 617 aa16.6■□□□□ 0.25
TMEM253-205ENST00000555314 CLEC11AQ9Y240 323 aa16.6■□□□□ 0.25
TMEM253-205ENST00000555314 MAP3K15Q6ZN16 1313 aa16.6■□□□□ 0.25
TMEM253-205ENST00000555314 NEFMP07197 916 aa16.59■□□□□ 0.25
TMEM253-205ENST00000555314 EIF6P56537 245 aaKnown RBP16.59■□□□□ 0.25
TMEM253-205ENST00000555314 DCTN1Q14203 1278 aa16.59■□□□□ 0.25
TMEM253-205ENST00000555314 DEFB115Q30KQ5 88 aa16.59■□□□□ 0.25
TMEM253-205ENST00000555314 ERBB4Q15303 1308 aa16.59■□□□□ 0.25
TMEM253-205ENST00000555314 RNF123Q5XPI4 1314 aa16.59■□□□□ 0.25
TMEM253-205ENST00000555314 FAM177BA6PVY3 158 aa16.58■□□□□ 0.24
TMEM253-205ENST00000555314 RPGRQ92834 1020 aaKnown RBP16.58■□□□□ 0.24
TMEM253-205ENST00000555314 LMOD1P29536 600 aaPredicted RBP16.57■□□□□ 0.24
TMEM253-205ENST00000555314 EIF4A1P60842 406 aaKnown RBP16.57■□□□□ 0.24
TMEM253-205ENST00000555314 MAP1SQ66K74 1059 aaPredicted RBP16.57■□□□□ 0.24
TMEM253-205ENST00000555314 KIF6Q6ZMV9 814 aa16.57■□□□□ 0.24
TMEM253-205ENST00000555314 RBM17Q96I25 401 aaKnown RBP16.57■□□□□ 0.24
TMEM253-205ENST00000555314 ADAMTSL1Q8N6G6 1762 aa16.56■□□□□ 0.24
TMEM253-205ENST00000555314 ABCC12Q96J65 1359 aa16.56■□□□□ 0.24
TMEM253-205ENST00000555314 USP50Q70EL3 339 aaPredicted RBP16.56■□□□□ 0.24
TMEM253-205ENST00000555314 ZNF34Q8IZ26 560 aa16.56■□□□□ 0.24
TMEM253-205ENST00000555314 DDX21Q9NR30 783 aaKnown RBP eCLIP16.56■□□□□ 0.24
TMEM253-205ENST00000555314 WDR33Q9C0J8 1336 aaKnown RBP16.55■□□□□ 0.24
TMEM253-205ENST00000555314 PARP10Q53GL7 1025 aa16.55■□□□□ 0.24
TMEM253-205ENST00000555314 NUTM1Q86Y26 1132 aa16.55■□□□□ 0.24
TMEM253-205ENST00000555314 LARGE2Q8N3Y3 721 aa16.55■□□□□ 0.24
TMEM253-205ENST00000555314 PNNQ9H307 717 aaKnown RBP16.55■□□□□ 0.24
TMEM253-205ENST00000555314 MIS18AQ9NYP9 233 aa16.55■□□□□ 0.24
TMEM253-205ENST00000555314 SCNN1DP51172 638 aa16.54■□□□□ 0.24
TMEM253-205ENST00000555314 LBX1P52954 281 aa16.54■□□□□ 0.24
TMEM253-205ENST00000555314 GIGYF2Q6Y7W6 1299 aaKnown RBP16.54■□□□□ 0.24
TMEM253-205ENST00000555314 TTLL7Q6ZT98 887 aa16.54■□□□□ 0.24
TMEM253-205ENST00000555314 TMX4Q9H1E5 349 aaPredicted RBP16.54■□□□□ 0.24
TMEM253-205ENST00000555314 RRP7AQ9Y3A4 280 aaKnown RBP16.54■□□□□ 0.24
TMEM253-205ENST00000555314 UBN2Q6ZU65 1347 aa16.53■□□□□ 0.24
TMEM253-205ENST00000555314 NTSR2O95665 410 aa16.53■□□□□ 0.24
TMEM253-205ENST00000555314 HSPA8P11142 646 aaKnown RBP16.53■□□□□ 0.24
TMEM253-205ENST00000555314 ECE1P42892 770 aa16.53■□□□□ 0.24
TMEM253-205ENST00000555314 SLC10A5Q5PT55 438 aa16.53■□□□□ 0.24
TMEM253-205ENST00000555314 SUSD4Q5VX71 490 aa16.53■□□□□ 0.24
TMEM253-205ENST00000555314 PPP1R42Q7Z4L9 355 aa16.53■□□□□ 0.24
TMEM253-205ENST00000555314 PLEKHF1Q96S99 279 aa16.53■□□□□ 0.24
TMEM253-205ENST00000555314 ABT1Q9ULW3 272 aaKnown RBP16.53■□□□□ 0.24
TMEM253-205ENST00000555314 GJA3Q9Y6H8 435 aa16.53■□□□□ 0.24
TMEM253-205ENST00000555314 PPEF1O14829 653 aaPredicted RBP16.52■□□□□ 0.24
TMEM253-205ENST00000555314 GPTP24298 496 aa16.52■□□□□ 0.24
TMEM253-205ENST00000555314 NFE2L2Q16236 605 aa16.52■□□□□ 0.24
TMEM253-205ENST00000555314 NIM1KQ8IY84 436 aa16.52■□□□□ 0.24
TMEM253-205ENST00000555314 RTFDC1Q9BY42 306 aaPredicted RBP16.52■□□□□ 0.24
TMEM253-205ENST00000555314 BABAM1Q9NWV8 329 aa16.52■□□□□ 0.24
TMEM253-205ENST00000555314 ATP6V0A2Q9Y487 856 aa16.52■□□□□ 0.24
TMEM253-205ENST00000555314 EPS15P42566 896 aa16.51■□□□□ 0.23
TMEM253-205ENST00000555314 NGEFQ8N5V2 710 aa16.51■□□□□ 0.23
TMEM253-205ENST00000555314 SUPT20HQ8NEM7 779 aa16.51■□□□□ 0.23
TMEM253-205ENST00000555314 NLRP3Q96P20 1036 aa16.51■□□□□ 0.23
TMEM253-205ENST00000555314 CDHR2Q9BYE9 1310 aa16.5■□□□□ 0.23
TMEM253-205ENST00000555314 BBOX1O75936 387 aa16.5■□□□□ 0.23
TMEM253-205ENST00000555314 MAP2K2P36507 400 aa16.5■□□□□ 0.23
TMEM253-205ENST00000555314 CAPNS2Q96L46 248 aa16.5■□□□□ 0.23
TMEM253-205ENST00000555314 ZBTB3Q9H5J0 574 aa16.5■□□□□ 0.23
TMEM253-205ENST00000555314 ADARB2Q9NS39 739 aaKnown RBP16.5■□□□□ 0.23
TMEM253-205ENST00000555314 PPIP5K2O43314 1243 aa16.49■□□□□ 0.23
TMEM253-205ENST00000555314 MYL6BP14649 208 aa16.49■□□□□ 0.23
TMEM253-205ENST00000555314 LRP10Q7Z4F1 713 aa16.49■□□□□ 0.23
TMEM253-205ENST00000555314 HHIPL1Q96JK4 782 aa16.49■□□□□ 0.23
TMEM253-205ENST00000555314 BEGAINQ9BUH8 593 aa16.49■□□□□ 0.23
TMEM253-205ENST00000555314 UTP14AQ9BVJ6 771 aaKnown RBP16.49■□□□□ 0.23
TMEM253-205ENST00000555314 RTN4Q9NQC3 1192 aaKnown RBP16.49■□□□□ 0.23
TMEM253-205ENST00000555314 GPRC5DQ9NZD1 345 aa16.49■□□□□ 0.23
TMEM253-205ENST00000555314 PGAP2Q9UHJ9 254 aa16.49■□□□□ 0.23
TMEM253-205ENST00000555314 ZNRF3Q9ULT6 936 aa16.49■□□□□ 0.23
TMEM253-205ENST00000555314 TLL2Q9Y6L7 1015 aa16.49■□□□□ 0.23
TMEM253-205ENST00000555314 COL4A5P29400 1685 aa16.49■□□□□ 0.23
TMEM253-205ENST00000555314 CACNA1SQ13698 1873 aa16.48■□□□□ 0.23
TMEM253-205ENST00000555314 CA12O43570 354 aa16.48■□□□□ 0.23
TMEM253-205ENST00000555314 CST9Q5W186 159 aa16.48■□□□□ 0.23
TMEM253-205ENST00000555314 ZC3H15Q8WU90 426 aaKnown RBP16.48■□□□□ 0.23
TMEM253-205ENST00000555314 ABHD8Q96I13 439 aa16.48■□□□□ 0.23
TMEM253-205ENST00000555314 GPR101Q96P66 508 aaPredicted RBP16.48■□□□□ 0.23
TMEM253-205ENST00000555314 LAMB4A4D0S4 1761 aa16.47■□□□□ 0.23
TMEM253-205ENST00000555314 PDIA6Q15084 440 aa16.47■□□□□ 0.23
TMEM253-205ENST00000555314 HSP90AB3PQ58FF7 597 aa16.47■□□□□ 0.23
TMEM253-205ENST00000555314 C3orf67Q6ZVT6 689 aa16.47■□□□□ 0.23
TMEM253-205ENST00000555314 SP8Q8IXZ3 490 aa16.47■□□□□ 0.23
TMEM253-205ENST00000555314 CXCL9Q07325 125 aa16.46■□□□□ 0.23
TMEM253-205ENST00000555314 AOC3Q16853 763 aa16.46■□□□□ 0.23
TMEM253-205ENST00000555314 SAMD1Q6SPF0 538 aaPredicted RBP16.46■□□□□ 0.23
TMEM253-205ENST00000555314 TMC4Q7Z404 712 aa16.46■□□□□ 0.23
TMEM253-205ENST00000555314 MAPK8IP3Q9UPT6 1336 aa16.45■□□□□ 0.22
TMEM253-205ENST00000555314 KIAA2012Q0VF49 1180 aa16.45■□□□□ 0.22
TMEM253-205ENST00000555314 TNIP1Q15025 636 aa16.45■□□□□ 0.22
TMEM253-205ENST00000555314 SAPCD2Q86UD0 394 aa16.45■□□□□ 0.22
TMEM253-205ENST00000555314 THUMPD2Q9BTF0 503 aaKnown RBP16.45■□□□□ 0.22
TMEM253-205ENST00000555314 TSPYL4Q9UJ04 414 aa16.45■□□□□ 0.22
TMEM253-205ENST00000555314 KDM3BQ7LBC6 1761 aa16.44■□□□□ 0.22
TMEM253-205ENST00000555314 TRAF5O00463 557 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms