RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 FAM173BQ6P4H8 233 aa14.56□□□□□ -0.08
ARHGEF40-206ENST00000555232 EAF2Q96CJ1 260 aaPredicted RBP14.56□□□□□ -0.08
ARHGEF40-206ENST00000555232 DIP2BQ9P265 1576 aa14.56□□□□□ -0.08
ARHGEF40-206ENST00000555232 GCKRQ14397 625 aa14.56□□□□□ -0.08
ARHGEF40-206ENST00000555232 SYCE3A1L190 88 aa14.56□□□□□ -0.08
ARHGEF40-206ENST00000555232 ESPNB1AK53 854 aa14.56□□□□□ -0.08
ARHGEF40-206ENST00000555232 RBM8AQ9Y5S9 174 aaKnown RBP14.55□□□□□ -0.08
ARHGEF40-206ENST00000555232 LRRC7Q96NW7 1537 aa14.55□□□□□ -0.08
ARHGEF40-206ENST00000555232 RASSF8Q8NHQ8 419 aa14.55□□□□□ -0.08
ARHGEF40-206ENST00000555232 CPSF1Q10570 1443 aaKnown RBP14.54□□□□□ -0.08
ARHGEF40-206ENST00000555232 PUS3Q9BZE2 481 aaKnown RBP14.54□□□□□ -0.08
ARHGEF40-206ENST00000555232 PNPLA6Q8IY17 1366 aa14.54□□□□□ -0.08
ARHGEF40-206ENST00000555232 RXRAP19793 462 aa14.54□□□□□ -0.08
ARHGEF40-206ENST00000555232 CHGBP05060 677 aa14.54□□□□□ -0.08
ARHGEF40-206ENST00000555232 PSMA5P28066 241 aa14.54□□□□□ -0.08
ARHGEF40-206ENST00000555232 LRRC24Q50LG9 513 aa14.53□□□□□ -0.08
ARHGEF40-206ENST00000555232 SYAP1Q96A49 352 aaPredicted RBP14.53□□□□□ -0.08
ARHGEF40-206ENST00000555232 TMX4Q9H1E5 349 aaPredicted RBP14.53□□□□□ -0.08
ARHGEF40-206ENST00000555232 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.53□□□□□ -0.08
ARHGEF40-206ENST00000555232 NEURL1BA8MQ27 555 aa14.53□□□□□ -0.08
ARHGEF40-206ENST00000555232 EPHA10Q5JZY3 1008 aa14.53□□□□□ -0.08
ARHGEF40-206ENST00000555232 BRF1Q92994 677 aa14.53□□□□□ -0.08
ARHGEF40-206ENST00000555232 METTL22Q9BUU2 404 aaPredicted RBP14.53□□□□□ -0.08
ARHGEF40-206ENST00000555232 ALDH1L1O75891 902 aa14.53□□□□□ -0.08
ARHGEF40-206ENST00000555232 TDO2P48775 406 aa14.53□□□□□ -0.08
ARHGEF40-206ENST00000555232 ANKRD18BA2A2Z9 1011 aa14.52□□□□□ -0.08
ARHGEF40-206ENST00000555232 IRS4O14654 1257 aaPredicted RBP14.52□□□□□ -0.08
ARHGEF40-206ENST00000555232 ZPR1O75312 459 aa14.52□□□□□ -0.08
ARHGEF40-206ENST00000555232 IGHMBP2P38935 993 aaKnown RBP14.52□□□□□ -0.08
ARHGEF40-206ENST00000555232 SYNE3Q6ZMZ3 975 aa14.52□□□□□ -0.08
ARHGEF40-206ENST00000555232 EVI5LQ96CN4 794 aa14.52□□□□□ -0.08
ARHGEF40-206ENST00000555232 MYO3AQ8NEV4 1616 aa14.52□□□□□ -0.08
ARHGEF40-206ENST00000555232 NASPP49321 788 aaPredicted RBP14.52□□□□□ -0.09
ARHGEF40-206ENST00000555232 ATP2B2Q01814 1243 aa14.52□□□□□ -0.09
ARHGEF40-206ENST00000555232 MIGA1Q8NAN2 632 aa14.52□□□□□ -0.09
ARHGEF40-206ENST00000555232 AIDAQ96BJ3 306 aa14.52□□□□□ -0.09
ARHGEF40-206ENST00000555232 TOM1O60784 492 aa14.51□□□□□ -0.09
ARHGEF40-206ENST00000555232 PI16Q6UXB8 463 aa14.51□□□□□ -0.09
ARHGEF40-206ENST00000555232 PCDH11XQ9BZA7 1347 aa14.51□□□□□ -0.09
ARHGEF40-206ENST00000555232 PCDH11YQ9BZA8 1340 aa14.51□□□□□ -0.09
ARHGEF40-206ENST00000555232 BAG4O95429 457 aaKnown RBP14.51□□□□□ -0.09
ARHGEF40-206ENST00000555232 AKAP17AQ02040 695 aaKnown RBP14.51□□□□□ -0.09
ARHGEF40-206ENST00000555232 ANKIB1Q9P2G1 1089 aa14.51□□□□□ -0.09
ARHGEF40-206ENST00000555232 PRDM10Q9NQV6 1147 aa14.5□□□□□ -0.09
ARHGEF40-206ENST00000555232 ZBTB1Q9Y2K1 713 aa14.5□□□□□ -0.09
ARHGEF40-206ENST00000555232 AK2P54819 239 aa14.5□□□□□ -0.09
ARHGEF40-206ENST00000555232 PDCL3Q9H2J4 239 aa14.5□□□□□ -0.09
ARHGEF40-206ENST00000555232 A0A1B0GUL7 405 aa14.5□□□□□ -0.09
ARHGEF40-206ENST00000555232 PTH1RQ03431 593 aa14.5□□□□□ -0.09
ARHGEF40-206ENST00000555232 ATP6V1DQ9Y5K8 247 aa14.5□□□□□ -0.09
ARHGEF40-206ENST00000555232 CD163L1Q9NR16 1453 aa14.5□□□□□ -0.09
ARHGEF40-206ENST00000555232 CDK12Q9NYV4 1490 aaPredicted RBP14.49□□□□□ -0.09
ARHGEF40-206ENST00000555232 ADGRL3Q9HAR2 1447 aa14.49□□□□□ -0.09
ARHGEF40-206ENST00000555232 GJB2P29033 226 aa14.49□□□□□ -0.09
ARHGEF40-206ENST00000555232 ATP2B3Q16720 1220 aa14.49□□□□□ -0.09
ARHGEF40-206ENST00000555232 LRRFIP1Q32MZ4 808 aaKnown RBP14.49□□□□□ -0.09
ARHGEF40-206ENST00000555232 VPS53Q5VIR6 699 aa14.49□□□□□ -0.09
ARHGEF40-206ENST00000555232 SPC24Q8NBT2 197 aa14.49□□□□□ -0.09
ARHGEF40-206ENST00000555232 ZHX1Q9UKY1 873 aaPredicted RBP14.49□□□□□ -0.09
ARHGEF40-206ENST00000555232 SKOR2Q2VWA4 1001 aaPredicted RBP14.49□□□□□ -0.09
ARHGEF40-206ENST00000555232 IQGAP1P46940 1657 aa14.49□□□□□ -0.09
ARHGEF40-206ENST00000555232 SLC9C2Q5TAH2 1124 aa14.48□□□□□ -0.09
ARHGEF40-206ENST00000555232 VWDEQ8N2E2 1590 aa14.48□□□□□ -0.09
ARHGEF40-206ENST00000555232 HIP1O00291 1037 aa14.48□□□□□ -0.09
ARHGEF40-206ENST00000555232 LIMCH1Q9UPQ0 1083 aa14.48□□□□□ -0.09
ARHGEF40-206ENST00000555232 NRXN1Q9ULB1 1477 aa14.48□□□□□ -0.09
ARHGEF40-206ENST00000555232 MICU3Q86XE3 530 aa14.48□□□□□ -0.09
ARHGEF40-206ENST00000555232 CKAP2LQ8IYA6 745 aa14.48□□□□□ -0.09
ARHGEF40-206ENST00000555232 POLR3DP05423 398 aaPredicted RBP14.47□□□□□ -0.09
ARHGEF40-206ENST00000555232 ITGA6P23229 1130 aa14.47□□□□□ -0.09
ARHGEF40-206ENST00000555232 PLBD2Q8NHP8 589 aa14.47□□□□□ -0.09
ARHGEF40-206ENST00000555232 SSH3Q8TE77 659 aa14.47□□□□□ -0.09
ARHGEF40-206ENST00000555232 SDF4Q9BRK5 362 aa14.47□□□□□ -0.09
ARHGEF40-206ENST00000555232 PREX1Q8TCU6 1659 aa14.47□□□□□ -0.09
ARHGEF40-206ENST00000555232 ERICH2A1L162 156 aa14.47□□□□□ -0.09
ARHGEF40-206ENST00000555232 F8W031 263 aaPredicted RBP14.47□□□□□ -0.09
ARHGEF40-206ENST00000555232 IGKV5-2P06315 115 aa14.47□□□□□ -0.09
ARHGEF40-206ENST00000555232 CPLX2Q6PUV4 134 aaKnown RBP14.47□□□□□ -0.09
ARHGEF40-206ENST00000555232 PIGBQ92521 554 aa14.47□□□□□ -0.09
ARHGEF40-206ENST00000555232 PES1O00541 588 aaKnown RBP14.47□□□□□ -0.09
ARHGEF40-206ENST00000555232 GNPATO15228 680 aa14.47□□□□□ -0.09
ARHGEF40-206ENST00000555232 PDE4CQ08493 712 aa14.47□□□□□ -0.09
ARHGEF40-206ENST00000555232 NBPF5PQ86XG9 351 aaPredicted RBP14.47□□□□□ -0.09
ARHGEF40-206ENST00000555232 RASEFQ8IZ41 740 aa14.47□□□□□ -0.09
ARHGEF40-206ENST00000555232 A0A0D9SFI3 127 aa14.47□□□□□ -0.09
ARHGEF40-206ENST00000555232 ME1P48163 572 aa14.47□□□□□ -0.09
ARHGEF40-206ENST00000555232 MRE11P49959 708 aa14.47□□□□□ -0.09
ARHGEF40-206ENST00000555232 TNNI3KQ59H18 835 aa14.47□□□□□ -0.09
ARHGEF40-206ENST00000555232 ZKSCAN3Q9BRR0 538 aa14.47□□□□□ -0.09
ARHGEF40-206ENST00000555232 GRPEL1Q9HAV7 217 aa14.47□□□□□ -0.09
ARHGEF40-206ENST00000555232 FPGT-TNNI3KV9GXZ4 949 aa14.47□□□□□ -0.09
ARHGEF40-206ENST00000555232 ERBB4Q15303 1308 aa14.46□□□□□ -0.09
ARHGEF40-206ENST00000555232 BECN2A8MW95 431 aa14.46□□□□□ -0.09
ARHGEF40-206ENST00000555232 TRIM29Q14134 588 aa14.46□□□□□ -0.09
ARHGEF40-206ENST00000555232 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.46□□□□□ -0.09
ARHGEF40-206ENST00000555232 PAG1Q9NWQ8 432 aa14.46□□□□□ -0.09
ARHGEF40-206ENST00000555232 CNPY2Q9Y2B0 182 aa14.46□□□□□ -0.09
ARHGEF40-206ENST00000555232 SETBP1Q9Y6X0 1596 aa14.46□□□□□ -0.09
ARHGEF40-206ENST00000555232 NCOA5Q9HCD5 579 aaKnown RBP14.46□□□□□ -0.09
ARHGEF40-206ENST00000555232 KCNQ2O43526 872 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms