RNA–Protein interactions for RNA: ENST00000554980.5

TGFB3-202, Transcript of transforming growth factor beta 3, humanhuman

TSL 2

Gene TGFB3, Length 2,708 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-202ENST00000554980 RASSF7Q02833 373 aa8.96□□□□□ -0.98
TGFB3-202ENST00000554980 NOP9Q86U38 636 aaKnown RBP8.96□□□□□ -0.98
TGFB3-202ENST00000554980 NEUROD6Q96NK8 337 aa8.96□□□□□ -0.98
TGFB3-202ENST00000554980 HSCBQ8IWL3 235 aa8.95□□□□□ -0.98
TGFB3-202ENST00000554980 CCAR1Q8IX12 1150 aaKnown RBP8.95□□□□□ -0.98
TGFB3-202ENST00000554980 TESK2Q96S53 571 aa8.95□□□□□ -0.98
TGFB3-202ENST00000554980 MUC3BQ9H195 1237 aa8.95□□□□□ -0.98
TGFB3-202ENST00000554980 SLC12A5Q9H2X9 1139 aa8.95□□□□□ -0.98
TGFB3-202ENST00000554980 G3BP2Q9UN86 482 aaKnown RBP8.95□□□□□ -0.98
TGFB3-202ENST00000554980 DIS3Q9Y2L1 958 aaKnown RBP8.95□□□□□ -0.98
TGFB3-202ENST00000554980 PHRF1Q9P1Y6 1649 aaKnown RBP8.95□□□□□ -0.98
TGFB3-202ENST00000554980 USP6P35125 1406 aa8.95□□□□□ -0.98
TGFB3-202ENST00000554980 SSH2Q76I76 1423 aa8.95□□□□□ -0.98
TGFB3-202ENST00000554980 TLDC2A0PJX2 215 aa8.95□□□□□ -0.98
TGFB3-202ENST00000554980 FAM182BQ5T319 152 aa8.95□□□□□ -0.98
TGFB3-202ENST00000554980 SUDS3Q9H7L9 328 aaPredicted RBP8.95□□□□□ -0.98
TGFB3-202ENST00000554980 ISY1Q9ULR0 285 aaKnown RBP8.95□□□□□ -0.98
TGFB3-202ENST00000554980 CSB-PGBD3P0DP91 1061 aa8.94□□□□□ -0.98
TGFB3-202ENST00000554980 HMGN5P82970 282 aaKnown RBP8.94□□□□□ -0.98
TGFB3-202ENST00000554980 VPS72Q15906 364 aa8.94□□□□□ -0.98
TGFB3-202ENST00000554980 NOM1Q5C9Z4 860 aaKnown RBP8.94□□□□□ -0.98
TGFB3-202ENST00000554980 CT47A1Q5JQC4 288 aaPredicted RBP8.94□□□□□ -0.98
TGFB3-202ENST00000554980 MAP7D2Q96T17 732 aa8.94□□□□□ -0.98
TGFB3-202ENST00000554980 PRDM11Q9NQV5 511 aa8.94□□□□□ -0.98
TGFB3-202ENST00000554980 MKRN1Q9UHC7 482 aaKnown RBP8.94□□□□□ -0.98
TGFB3-202ENST00000554980 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.94□□□□□ -0.98
TGFB3-202ENST00000554980 BRWD3Q6RI45 1802 aa8.94□□□□□ -0.98
TGFB3-202ENST00000554980 GOLGA6L3A6NEY3 463 aa8.94□□□□□ -0.98
TGFB3-202ENST00000554980 PDE6BP35913 854 aa8.94□□□□□ -0.98
TGFB3-202ENST00000554980 TTC30AQ86WT1 665 aa8.94□□□□□ -0.98
TGFB3-202ENST00000554980 NRAPQ86VF7 1730 aa8.94□□□□□ -0.98
TGFB3-202ENST00000554980 CD163L1Q9NR16 1453 aa8.93□□□□□ -0.98
TGFB3-202ENST00000554980 GCP02774 474 aa8.93□□□□□ -0.98
TGFB3-202ENST00000554980 CCDC172P0C7W6 258 aa8.93□□□□□ -0.98
TGFB3-202ENST00000554980 NAT2P11245 290 aa8.93□□□□□ -0.98
TGFB3-202ENST00000554980 NAP1L1P55209 391 aaKnown RBP8.93□□□□□ -0.98
TGFB3-202ENST00000554980 NLRP6P59044 892 aa8.93□□□□□ -0.98
TGFB3-202ENST00000554980 FAM98CQ17RN3 349 aaKnown RBP8.93□□□□□ -0.98
TGFB3-202ENST00000554980 MFSD4BQ5TF39 518 aa8.93□□□□□ -0.98
TGFB3-202ENST00000554980 SEPT12Q8IYM1 358 aa8.93□□□□□ -0.98
TGFB3-202ENST00000554980 CDC5LQ99459 802 aaKnown RBP8.93□□□□□ -0.98
TGFB3-202ENST00000554980 STRN4Q9NRL3 753 aa8.93□□□□□ -0.98
TGFB3-202ENST00000554980 NRKQ7Z2Y5 1582 aa8.93□□□□□ -0.98
TGFB3-202ENST00000554980 NYAP1Q6ZVC0 841 aa8.93□□□□□ -0.98
TGFB3-202ENST00000554980 ZSCAN30Q86W11 494 aa8.93□□□□□ -0.98
TGFB3-202ENST00000554980 C22orf23Q9BZE7 217 aa8.93□□□□□ -0.98
TGFB3-202ENST00000554980 IFT122Q9HBG6 1241 aa8.93□□□□□ -0.98
TGFB3-202ENST00000554980 PIK3C2AO00443 1686 aa8.93□□□□□ -0.98
TGFB3-202ENST00000554980 USP19O94966 1318 aa8.92□□□□□ -0.98
TGFB3-202ENST00000554980 LETM1O95202 739 aaPredicted RBP8.92□□□□□ -0.98
TGFB3-202ENST00000554980 FAM163BP0C2L3 166 aa8.92□□□□□ -0.98
TGFB3-202ENST00000554980 SDE2Q6IQ49 451 aa8.92□□□□□ -0.98
TGFB3-202ENST00000554980 TMC1Q8TDI8 760 aa8.92□□□□□ -0.98
TGFB3-202ENST00000554980 RETREG1Q9H6L5 497 aa8.92□□□□□ -0.98
TGFB3-202ENST00000554980 NWD2Q9ULI1 1742 aa8.92□□□□□ -0.98
TGFB3-202ENST00000554980 CAMTA1Q9Y6Y1 1673 aa8.92□□□□□ -0.98
TGFB3-202ENST00000554980 CPSF1Q10570 1443 aaKnown RBP8.92□□□□□ -0.98
TGFB3-202ENST00000554980 IPO5O00410 1097 aaKnown RBP8.92□□□□□ -0.98
TGFB3-202ENST00000554980 IFT88Q13099 833 aa8.92□□□□□ -0.98
TGFB3-202ENST00000554980 PSMD2Q13200 908 aa8.92□□□□□ -0.98
TGFB3-202ENST00000554980 POLA2Q14181 598 aa8.92□□□□□ -0.98
TGFB3-202ENST00000554980 PLEKHG6Q3KR16 790 aa8.92□□□□□ -0.98
TGFB3-202ENST00000554980 LARP1BQ659C4 914 aaKnown RBP8.92□□□□□ -0.98
TGFB3-202ENST00000554980 IL17RAQ96F46 866 aa8.92□□□□□ -0.98
TGFB3-202ENST00000554980 AXIN2Q9Y2T1 843 aa8.92□□□□□ -0.98
TGFB3-202ENST00000554980 TTC21BQ7Z4L5 1316 aa8.91□□□□□ -0.98
TGFB3-202ENST00000554980 CASQ1P31415 396 aa8.91□□□□□ -0.98
TGFB3-202ENST00000554980 E2F5Q15329 346 aa8.91□□□□□ -0.98
TGFB3-202ENST00000554980 TBC1D2Q9BYX2 928 aa8.91□□□□□ -0.98
TGFB3-202ENST00000554980 COL14A1Q05707 1796 aaKnown RBP8.91□□□□□ -0.98
TGFB3-202ENST00000554980 EIF5P55010 431 aaKnown RBP8.91□□□□□ -0.98
TGFB3-202ENST00000554980 GJC2Q5T442 439 aaPredicted RBP8.91□□□□□ -0.98
TGFB3-202ENST00000554980 LARP1Q6PKG0 1096 aaKnown RBP8.91□□□□□ -0.98
TGFB3-202ENST00000554980 RNF25Q96BH1 459 aaPredicted RBP8.91□□□□□ -0.98
TGFB3-202ENST00000554980 SUN2Q9UH99 717 aa8.91□□□□□ -0.98
TGFB3-202ENST00000554980 SFMBT1Q9UHJ3 866 aa8.91□□□□□ -0.98
TGFB3-202ENST00000554980 SPATA31A5Q5VU36 1347 aa8.91□□□□□ -0.98
TGFB3-202ENST00000554980 SPATA31A7Q8IWB4 1347 aa8.91□□□□□ -0.98
TGFB3-202ENST00000554980 CD53P19397 219 aa8.9□□□□□ -0.98
TGFB3-202ENST00000554980 FBLN1P23142 703 aa8.9□□□□□ -0.98
TGFB3-202ENST00000554980 CCDC70Q6NSX1 233 aa8.9□□□□□ -0.98
TGFB3-202ENST00000554980 CC2D1AQ6P1N0 951 aaPredicted RBP8.9□□□□□ -0.98
TGFB3-202ENST00000554980 NLRP13Q86W25 1043 aa8.9□□□□□ -0.98
TGFB3-202ENST00000554980 NME9Q86XW9 330 aa8.9□□□□□ -0.98
TGFB3-202ENST00000554980 NT5DC4Q86YG4 428 aa8.9□□□□□ -0.98
TGFB3-202ENST00000554980 DRC7Q8IY82 874 aa8.9□□□□□ -0.98
TGFB3-202ENST00000554980 AKAP12Q02952 1782 aa8.9□□□□□ -0.98
TGFB3-202ENST00000554980 KTN1Q86UP2 1357 aaKnown RBP8.9□□□□□ -0.98
TGFB3-202ENST00000554980 CTAGE5O15320 804 aa8.9□□□□□ -0.98
TGFB3-202ENST00000554980 HMMRO75330 724 aa8.9□□□□□ -0.98
TGFB3-202ENST00000554980 C16orf87Q6PH81 154 aa8.9□□□□□ -0.98
TGFB3-202ENST00000554980 ANKRD13BQ86YJ7 626 aa8.9□□□□□ -0.98
TGFB3-202ENST00000554980 CFAP53Q96M91 514 aa8.9□□□□□ -0.98
TGFB3-202ENST00000554980 GTPBP4Q9BZE4 634 aaKnown RBP8.9□□□□□ -0.98
TGFB3-202ENST00000554980 USTQ9Y2C2 406 aa8.9□□□□□ -0.98
TGFB3-202ENST00000554980 A0A0G2JS52 829 aa8.89□□□□□ -0.99
TGFB3-202ENST00000554980 TIMM44O43615 452 aa8.89□□□□□ -0.99
TGFB3-202ENST00000554980 ZNF853P0CG23 659 aa8.89□□□□□ -0.99
TGFB3-202ENST00000554980 MICALL1Q8N3F8 863 aa8.89□□□□□ -0.99
TGFB3-202ENST00000554980 LARP6Q9BRS8 491 aaKnown RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms