RNA–Protein interactions for RNA: ENST00000554947.5

SDR39U1-209, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,203 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-209ENST00000554947 COL11A2P13942 1736 aaPredicted RBP30.96■■■□□ 2.55
SDR39U1-209ENST00000554947 MAP3K2Q9Y2U5 619 aa30.96■■■□□ 2.55
SDR39U1-209ENST00000554947 CHRNA5P30532 468 aa30.95■■■□□ 2.55
SDR39U1-209ENST00000554947 FKBP5Q13451 457 aaPredicted RBP30.95■■■□□ 2.55
SDR39U1-209ENST00000554947 C2CD5Q86YS7 1000 aa30.95■■■□□ 2.55
SDR39U1-209ENST00000554947 CCDC24Q8N4L8 307 aa30.95■■■□□ 2.55
SDR39U1-209ENST00000554947 NUTM1Q86Y26 1132 aa30.94■■■□□ 2.54
SDR39U1-209ENST00000554947 GRIN3BO60391 1043 aa30.93■■■□□ 2.54
SDR39U1-209ENST00000554947 ERFEQ4G0M1 354 aa30.93■■■□□ 2.54
SDR39U1-209ENST00000554947 SLC10A5Q5PT55 438 aa30.93■■■□□ 2.54
SDR39U1-209ENST00000554947 CCDC191Q8NCU4 936 aa30.93■■■□□ 2.54
SDR39U1-209ENST00000554947 ABCC12Q96J65 1359 aa30.92■■■□□ 2.54
SDR39U1-209ENST00000554947 ATP5J2-PTCD1G3V325 749 aa30.92■■■□□ 2.54
SDR39U1-209ENST00000554947 YBX3P16989 372 aaKnown RBP eCLIP30.92■■■□□ 2.54
SDR39U1-209ENST00000554947 NEXNQ0ZGT2 675 aa30.92■■■□□ 2.54
SDR39U1-209ENST00000554947 MRPL50Q8N5N7 158 aaKnown RBP30.92■■■□□ 2.54
SDR39U1-209ENST00000554947 MYD88Q99836 296 aa30.92■■■□□ 2.54
SDR39U1-209ENST00000554947 SRGNP10124 158 aa30.91■■■□□ 2.54
SDR39U1-209ENST00000554947 PELP1Q8IZL8 1130 aaKnown RBP30.91■■■□□ 2.54
SDR39U1-209ENST00000554947 SSH1Q8WYL5 1049 aa30.91■■■□□ 2.54
SDR39U1-209ENST00000554947 TRMT112Q9UI30 125 aaKnown RBP30.91■■■□□ 2.54
SDR39U1-209ENST00000554947 SH3TC1Q8TE82 1336 aa30.91■■■□□ 2.54
SDR39U1-209ENST00000554947 CHD4Q14839 1912 aa30.9■■■□□ 2.54
SDR39U1-209ENST00000554947 TNRC6CQ9HCJ0 1690 aaKnown RBP30.9■■■□□ 2.54
SDR39U1-209ENST00000554947 DALRD3Q5D0E6 543 aaKnown RBP30.9■■■□□ 2.54
SDR39U1-209ENST00000554947 STYK1Q6J9G0 422 aa30.9■■■□□ 2.54
SDR39U1-209ENST00000554947 DNAAF4Q8WXU2 420 aa30.9■■■□□ 2.54
SDR39U1-209ENST00000554947 MASTLQ96GX5 879 aa30.89■■■□□ 2.54
SDR39U1-209ENST00000554947 GOLGB1Q14789 3259 aaKnown RBP30.88■■■□□ 2.53
SDR39U1-209ENST00000554947 BRPF1P55201 1214 aaPredicted RBP30.88■■■□□ 2.53
SDR39U1-209ENST00000554947 CRY2Q49AN0 593 aa30.88■■■□□ 2.53
SDR39U1-209ENST00000554947 TTLL6Q8N841 843 aa30.88■■■□□ 2.53
SDR39U1-209ENST00000554947 CWC25Q9NXE8 425 aaPredicted RBP30.88■■■□□ 2.53
SDR39U1-209ENST00000554947 LAMB2P55268 1798 aa30.87■■■□□ 2.53
SDR39U1-209ENST00000554947 NPR1P16066 1061 aa30.87■■■□□ 2.53
SDR39U1-209ENST00000554947 BCS1LQ9Y276 419 aa30.87■■■□□ 2.53
SDR39U1-209ENST00000554947 PTPRCP08575 1304 aa30.87■■■□□ 2.53
SDR39U1-209ENST00000554947 DDX60Q8IY21 1712 aaKnown RBP30.87■■■□□ 2.53
SDR39U1-209ENST00000554947 IGKV5-2P06315 115 aa30.86■■■□□ 2.53
SDR39U1-209ENST00000554947 ZBTB38Q8NAP3 1195 aaPredicted RBP30.86■■■□□ 2.53
SDR39U1-209ENST00000554947 CNKSR1Q969H4 720 aa30.86■■■□□ 2.53
SDR39U1-209ENST00000554947 ZNF622Q969S3 477 aaKnown RBP eCLIP30.85■■■□□ 2.53
SDR39U1-209ENST00000554947 NLRP3Q96P20 1036 aa30.85■■■□□ 2.53
SDR39U1-209ENST00000554947 CACNA1SQ13698 1873 aa30.84■■■□□ 2.53
SDR39U1-209ENST00000554947 HSP90B1P14625 803 aaKnown RBP30.84■■■□□ 2.53
SDR39U1-209ENST00000554947 LINS1Q8NG48 757 aa30.84■■■□□ 2.53
SDR39U1-209ENST00000554947 SMC4Q9NTJ3 1288 aa30.84■■■□□ 2.53
SDR39U1-209ENST00000554947 NEURL1BA8MQ27 555 aa30.83■■■□□ 2.53
SDR39U1-209ENST00000554947 PCCAP05165 728 aaPredicted RBP30.83■■■□□ 2.53
SDR39U1-209ENST00000554947 RARSP54136 660 aaKnown RBP30.83■■■□□ 2.53
SDR39U1-209ENST00000554947 FAM89AQ96GI7 184 aa30.82■■■□□ 2.52
SDR39U1-209ENST00000554947 WWC3Q9ULE0 1092 aa30.82■■■□□ 2.52
SDR39U1-209ENST00000554947 SLX4Q8IY92 1834 aa30.82■■■□□ 2.52
SDR39U1-209ENST00000554947 HOXA10P31260 410 aaPredicted RBP30.81■■■□□ 2.52
SDR39U1-209ENST00000554947 ALDH1B1P30837 517 aa30.8■■■□□ 2.52
SDR39U1-209ENST00000554947 SYNE4Q8N205 404 aa30.8■■■□□ 2.52
SDR39U1-209ENST00000554947 BCL2L13Q9BXK5 485 aa30.8■■■□□ 2.52
SDR39U1-209ENST00000554947 UTRNP46939 3433 aa30.79■■■□□ 2.52
SDR39U1-209ENST00000554947 F6X3S4 739 aa30.79■■■□□ 2.52
SDR39U1-209ENST00000554947 HCLS1P14317 486 aaPredicted RBP30.79■■■□□ 2.52
SDR39U1-209ENST00000554947 CWF19L2Q2TBE0 894 aaKnown RBP30.79■■■□□ 2.52
SDR39U1-209ENST00000554947 BEND3Q5T5X7 828 aa30.79■■■□□ 2.52
SDR39U1-209ENST00000554947 RPGRQ92834 1020 aaKnown RBP30.79■■■□□ 2.52
SDR39U1-209ENST00000554947 MYH3P11055 1940 aa30.79■■■□□ 2.52
SDR39U1-209ENST00000554947 CDHR2Q9BYE9 1310 aa30.78■■■□□ 2.52
SDR39U1-209ENST00000554947 IRS4O14654 1257 aaPredicted RBP30.78■■■□□ 2.52
SDR39U1-209ENST00000554947 GCKRQ14397 625 aa30.77■■■□□ 2.52
SDR39U1-209ENST00000554947 RBM17Q96I25 401 aaKnown RBP30.77■■■□□ 2.52
SDR39U1-209ENST00000554947 CRAMP1Q96RY5 1269 aa30.77■■■□□ 2.52
SDR39U1-209ENST00000554947 PRPF40BQ6NWY9 871 aaKnown RBP30.76■■■□□ 2.51
SDR39U1-209ENST00000554947 C3orf67Q6ZVT6 689 aa30.76■■■□□ 2.51
SDR39U1-209ENST00000554947 KIF16BQ96L93 1317 aa30.75■■■□□ 2.51
SDR39U1-209ENST00000554947 ALDH1L1O75891 902 aa30.75■■■□□ 2.51
SDR39U1-209ENST00000554947 SF3B3Q15393 1217 aaKnown RBP30.75■■■□□ 2.51
SDR39U1-209ENST00000554947 H7C1W4 665 aa30.74■■■□□ 2.51
SDR39U1-209ENST00000554947 SOGA3Q5TF21 947 aa30.74■■■□□ 2.51
SDR39U1-209ENST00000554947 RTL5Q5HYW3 569 aaPredicted RBP30.73■■■□□ 2.51
SDR39U1-209ENST00000554947 ARHGAP45Q92619 1136 aa30.73■■■□□ 2.51
SDR39U1-209ENST00000554947 FER1L6Q2WGJ9 1857 aa30.73■■■□□ 2.51
SDR39U1-209ENST00000554947 PDE8AO60658 829 aa30.72■■■□□ 2.51
SDR39U1-209ENST00000554947 SRCIN1Q9C0H9 1055 aa30.72■■■□□ 2.51
SDR39U1-209ENST00000554947 NOB1Q9ULX3 412 aaKnown RBP30.72■■■□□ 2.51
SDR39U1-209ENST00000554947 SLC4A10Q6U841 1118 aa30.71■■■□□ 2.51
SDR39U1-209ENST00000554947 C7orf43Q8WVR3 580 aa30.71■■■□□ 2.51
SDR39U1-209ENST00000554947 API5Q9BZZ5 524 aaKnown RBP30.71■■■□□ 2.51
SDR39U1-209ENST00000554947 SBF1O95248 1867 aa30.7■■■□□ 2.51
SDR39U1-209ENST00000554947 ARHGAP27Q6ZUM4 889 aa30.7■■■□□ 2.51
SDR39U1-209ENST00000554947 DDX46Q7L014 1031 aaKnown RBP30.69■■■□□ 2.5
SDR39U1-209ENST00000554947 UBE3BQ7Z3V4 1068 aa30.69■■■□□ 2.5
SDR39U1-209ENST00000554947 PLA2G12BQ9BX93 195 aa30.69■■■□□ 2.5
SDR39U1-209ENST00000554947 IPO8O15397 1037 aaKnown RBP30.68■■■□□ 2.5
SDR39U1-209ENST00000554947 C21orf2O43822 256 aa30.68■■■□□ 2.5
SDR39U1-209ENST00000554947 CASP7P55210 303 aa30.68■■■□□ 2.5
SDR39U1-209ENST00000554947 TAF1P21675 1872 aa30.67■■■□□ 2.5
SDR39U1-209ENST00000554947 ABCC4O15439 1325 aa30.67■■■□□ 2.5
SDR39U1-209ENST00000554947 BBOX1O75936 387 aa30.66■■■□□ 2.5
SDR39U1-209ENST00000554947 CCDC152Q4G0S7 254 aa30.66■■■□□ 2.5
SDR39U1-209ENST00000554947 CC2D2BQ6DHV5 1058 aa30.66■■■□□ 2.5
SDR39U1-209ENST00000554947 JARID2Q92833 1246 aaPredicted RBP30.66■■■□□ 2.5
SDR39U1-209ENST00000554947 GRM8O00222 908 aa30.65■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms