RNA–Protein interactions for RNA: ENST00000554844.1

TMEM253-204, Transcript of transmembrane protein 253, humanhuman

TSL 4

Gene TMEM253, Length 591 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-204ENST00000554844 LAMB4A4D0S4 1761 aa12.8□□□□□ -0.36
TMEM253-204ENST00000554844 VEGFBP49765 207 aa12.8□□□□□ -0.36
TMEM253-204ENST00000554844 DCTN1Q14203 1278 aa12.8□□□□□ -0.36
TMEM253-204ENST00000554844 GRIPAP1Q4V328 841 aa12.8□□□□□ -0.36
TMEM253-204ENST00000554844 CNTROBQ8N137 903 aa12.8□□□□□ -0.36
TMEM253-204ENST00000554844 PSMD1Q99460 953 aa12.8□□□□□ -0.36
TMEM253-204ENST00000554844 GJA3Q9Y6H8 435 aa12.8□□□□□ -0.36
TMEM253-204ENST00000554844 NBPF26B4DH59 902 aa12.79□□□□□ -0.36
TMEM253-204ENST00000554844 FZD9O00144 591 aa12.79□□□□□ -0.36
TMEM253-204ENST00000554844 DEFB115Q30KQ5 88 aa12.79□□□□□ -0.36
TMEM253-204ENST00000554844 NBPF10Q6P3W6 841 aaKnown RBP12.79□□□□□ -0.36
TMEM253-204ENST00000554844 PAXIP1Q6ZW49 1069 aaPredicted RBP12.79□□□□□ -0.36
TMEM253-204ENST00000554844 NBPF15Q8N660 670 aa12.79□□□□□ -0.36
TMEM253-204ENST00000554844 ERVV-1B6SEH8 477 aa12.78□□□□□ -0.36
TMEM253-204ENST00000554844 ITGBL1O95965 494 aaPredicted RBP12.78□□□□□ -0.36
TMEM253-204ENST00000554844 PPP2R1AP30153 589 aa12.78□□□□□ -0.36
TMEM253-204ENST00000554844 MAP2K1Q02750 393 aaPredicted RBP12.78□□□□□ -0.36
TMEM253-204ENST00000554844 HLFQ16534 295 aa12.78□□□□□ -0.36
TMEM253-204ENST00000554844 MAP1SQ66K74 1059 aaPredicted RBP12.78□□□□□ -0.36
TMEM253-204ENST00000554844 OLFM4Q6UX06 510 aa12.78□□□□□ -0.36
TMEM253-204ENST00000554844 LARGE2Q8N3Y3 721 aa12.78□□□□□ -0.36
TMEM253-204ENST00000554844 RBM17Q96I25 401 aaKnown RBP12.78□□□□□ -0.36
TMEM253-204ENST00000554844 BEGAINQ9BUH8 593 aa12.78□□□□□ -0.36
TMEM253-204ENST00000554844 MAP3K15Q6ZN16 1313 aa12.78□□□□□ -0.36
TMEM253-204ENST00000554844 NUTM1Q86Y26 1132 aa12.77□□□□□ -0.37
TMEM253-204ENST00000554844 RRP7AQ9Y3A4 280 aaKnown RBP12.77□□□□□ -0.37
TMEM253-204ENST00000554844 RASSF10A6NK89 507 aa12.76□□□□□ -0.37
TMEM253-204ENST00000554844 PPEF1O14829 653 aaPredicted RBP12.76□□□□□ -0.37
TMEM253-204ENST00000554844 MYL6BP14649 208 aa12.76□□□□□ -0.37
TMEM253-204ENST00000554844 GPTP24298 496 aa12.76□□□□□ -0.37
TMEM253-204ENST00000554844 ECE1P42892 770 aa12.76□□□□□ -0.37
TMEM253-204ENST00000554844 LBX1P52954 281 aa12.76□□□□□ -0.37
TMEM253-204ENST00000554844 CRY2Q49AN0 593 aa12.76□□□□□ -0.37
TMEM253-204ENST00000554844 PPP1R42Q7Z4L9 355 aa12.76□□□□□ -0.37
TMEM253-204ENST00000554844 NIM1KQ8IY84 436 aa12.76□□□□□ -0.37
TMEM253-204ENST00000554844 PNNQ9H307 717 aaKnown RBP12.76□□□□□ -0.37
TMEM253-204ENST00000554844 SPINK5Q9NQ38 1064 aaPredicted RBP12.76□□□□□ -0.37
TMEM253-204ENST00000554844 WBP1LQ9NX94 342 aa12.76□□□□□ -0.37
TMEM253-204ENST00000554844 MIS18AQ9NYP9 233 aa12.76□□□□□ -0.37
TMEM253-204ENST00000554844 MAPK8IP3Q9UPT6 1336 aa12.76□□□□□ -0.37
TMEM253-204ENST00000554844 ABCC12Q96J65 1359 aa12.76□□□□□ -0.37
TMEM253-204ENST00000554844 IBTKQ9P2D0 1353 aaPredicted RBP12.76□□□□□ -0.37
TMEM253-204ENST00000554844 ADAMTSL1Q8N6G6 1762 aa12.75□□□□□ -0.37
TMEM253-204ENST00000554844 WDR33Q9C0J8 1336 aaKnown RBP12.75□□□□□ -0.37
TMEM253-204ENST00000554844 ZBTB3Q9H5J0 574 aa12.75□□□□□ -0.37
TMEM253-204ENST00000554844 DDX21Q9NR30 783 aaKnown RBP eCLIP12.75□□□□□ -0.37
TMEM253-204ENST00000554844 NUP98P52948 1817 aa12.74□□□□□ -0.37
TMEM253-204ENST00000554844 RIC1Q4ADV7 1423 aa12.74□□□□□ -0.37
TMEM253-204ENST00000554844 TCERG1O14776 1098 aaKnown RBP12.74□□□□□ -0.37
TMEM253-204ENST00000554844 PPIP5K2O43314 1243 aa12.74□□□□□ -0.37
TMEM253-204ENST00000554844 GRM1Q13255 1194 aa12.74□□□□□ -0.37
TMEM253-204ENST00000554844 PARP10Q53GL7 1025 aa12.74□□□□□ -0.37
TMEM253-204ENST00000554844 SUPT20HQ8NEM7 779 aa12.74□□□□□ -0.37
TMEM253-204ENST00000554844 CRAMP1Q96RY5 1269 aa12.74□□□□□ -0.37
TMEM253-204ENST00000554844 ERBB4Q15303 1308 aa12.73□□□□□ -0.37
TMEM253-204ENST00000554844 HOXA10P31260 410 aaPredicted RBP12.73□□□□□ -0.37
TMEM253-204ENST00000554844 TTLL7Q6ZT98 887 aa12.73□□□□□ -0.37
TMEM253-204ENST00000554844 USP50Q70EL3 339 aaPredicted RBP12.73□□□□□ -0.37
TMEM253-204ENST00000554844 NLRP3Q96P20 1036 aa12.73□□□□□ -0.37
TMEM253-204ENST00000554844 KDM3BQ7LBC6 1761 aa12.73□□□□□ -0.37
TMEM253-204ENST00000554844 HSPA8P11142 646 aaKnown RBP12.72□□□□□ -0.37
TMEM253-204ENST00000554844 EIF4A1P60842 406 aaKnown RBP12.72□□□□□ -0.37
TMEM253-204ENST00000554844 NFE2L2Q16236 605 aa12.72□□□□□ -0.37
TMEM253-204ENST00000554844 SUSD4Q5VX71 490 aa12.72□□□□□ -0.37
TMEM253-204ENST00000554844 CAPNS2Q96L46 248 aa12.72□□□□□ -0.37
TMEM253-204ENST00000554844 VPS33BQ9H267 617 aa12.72□□□□□ -0.37
TMEM253-204ENST00000554844 UBN2Q6ZU65 1347 aa12.71□□□□□ -0.37
TMEM253-204ENST00000554844 DLG5Q8TDM6 1919 aa12.71□□□□□ -0.37
TMEM253-204ENST00000554844 EPS15P42566 896 aa12.71□□□□□ -0.37
TMEM253-204ENST00000554844 GIGYF2Q6Y7W6 1299 aaKnown RBP12.71□□□□□ -0.37
TMEM253-204ENST00000554844 UTP14AQ9BVJ6 771 aaKnown RBP12.71□□□□□ -0.37
TMEM253-204ENST00000554844 ADARB2Q9NS39 739 aaKnown RBP12.71□□□□□ -0.37
TMEM253-204ENST00000554844 TSPYL4Q9UJ04 414 aa12.71□□□□□ -0.37
TMEM253-204ENST00000554844 NTSR2O95665 410 aa12.7□□□□□ -0.38
TMEM253-204ENST00000554844 SCNN1DP51172 638 aa12.7□□□□□ -0.38
TMEM253-204ENST00000554844 AOC3Q16853 763 aa12.7□□□□□ -0.38
TMEM253-204ENST00000554844 SNED1Q8TER0 1413 aa12.7□□□□□ -0.38
TMEM253-204ENST00000554844 TRPM7Q96QT4 1865 aa12.7□□□□□ -0.38
TMEM253-204ENST00000554844 EIF2S2P20042 333 aaKnown RBP12.69□□□□□ -0.38
TMEM253-204ENST00000554844 HSP90AB3PQ58FF7 597 aa12.69□□□□□ -0.38
TMEM253-204ENST00000554844 CYP4F22Q6NT55 531 aa12.69□□□□□ -0.38
TMEM253-204ENST00000554844 DPP8Q6V1X1 898 aaPredicted RBP12.69□□□□□ -0.38
TMEM253-204ENST00000554844 ZNF34Q8IZ26 560 aa12.69□□□□□ -0.38
TMEM253-204ENST00000554844 ABHD8Q96I13 439 aa12.69□□□□□ -0.38
TMEM253-204ENST00000554844 GPR101Q96P66 508 aaPredicted RBP12.69□□□□□ -0.38
TMEM253-204ENST00000554844 BCL2L13Q9BXK5 485 aa12.69□□□□□ -0.38
TMEM253-204ENST00000554844 ATP6V0A2Q9Y487 856 aa12.69□□□□□ -0.38
TMEM253-204ENST00000554844 LMOD3Q0VAK6 560 aa12.68□□□□□ -0.38
TMEM253-204ENST00000554844 TNIP1Q15025 636 aa12.68□□□□□ -0.38
TMEM253-204ENST00000554844 DDX46Q7L014 1031 aaKnown RBP12.68□□□□□ -0.38
TMEM253-204ENST00000554844 THUMPD2Q9BTF0 503 aaKnown RBP12.68□□□□□ -0.38
TMEM253-204ENST00000554844 GPRC5DQ9NZD1 345 aa12.68□□□□□ -0.38
TMEM253-204ENST00000554844 ZNRF3Q9ULT6 936 aa12.68□□□□□ -0.38
TMEM253-204ENST00000554844 TLL2Q9Y6L7 1015 aa12.68□□□□□ -0.38
TMEM253-204ENST00000554844 LTBP1Q14766 1721 aa12.68□□□□□ -0.38
TMEM253-204ENST00000554844 COL4A5P29400 1685 aa12.67□□□□□ -0.38
TMEM253-204ENST00000554844 TRAF5O00463 557 aa12.67□□□□□ -0.38
TMEM253-204ENST00000554844 CA12O43570 354 aa12.67□□□□□ -0.38
TMEM253-204ENST00000554844 BBOX1O75936 387 aa12.67□□□□□ -0.38
TMEM253-204ENST00000554844 CELF2O95319 508 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms