RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 NAA15Q9BXJ9 866 aaKnown RBP16.07■□□□□ 0.16
VTI1B-204ENST00000554659 RAB3GAP1Q15042 981 aa16.07■□□□□ 0.16
VTI1B-204ENST00000554659 GPATCH11Q8N954 259 aa16.07■□□□□ 0.16
VTI1B-204ENST00000554659 PI4KAP2A4QPH2 592 aa16.07■□□□□ 0.16
VTI1B-204ENST00000554659 DNA2P51530 1060 aa16.07■□□□□ 0.16
VTI1B-204ENST00000554659 CCDC82Q8N4S0 544 aa16.07■□□□□ 0.16
VTI1B-204ENST00000554659 MRPL50Q8N5N7 158 aaKnown RBP16.07■□□□□ 0.16
VTI1B-204ENST00000554659 PI4KAP1Q8N8J0 262 aa16.07■□□□□ 0.16
VTI1B-204ENST00000554659 MEIS3Q99687 375 aa16.07■□□□□ 0.16
VTI1B-204ENST00000554659 PHF8Q9UPP1 1060 aa16.07■□□□□ 0.16
VTI1B-204ENST00000554659 CNPY2Q9Y2B0 182 aa16.07■□□□□ 0.16
VTI1B-204ENST00000554659 LAMC3Q9Y6N6 1575 aa16.06■□□□□ 0.16
VTI1B-204ENST00000554659 METAP2P50579 478 aaKnown RBP eCLIP16.06■□□□□ 0.16
VTI1B-204ENST00000554659 NF2P35240 595 aa16.06■□□□□ 0.16
VTI1B-204ENST00000554659 TMEM67Q5HYA8 995 aa16.06■□□□□ 0.16
VTI1B-204ENST00000554659 FAM114A1Q8IWE2 563 aa16.06■□□□□ 0.16
VTI1B-204ENST00000554659 BCCIPQ9P287 314 aaKnown RBP eCLIP16.06■□□□□ 0.16
VTI1B-204ENST00000554659 BIVM-ERCC5R4GMW8 1640 aa16.06■□□□□ 0.16
VTI1B-204ENST00000554659 AMPD3Q01432 767 aa16.05■□□□□ 0.16
VTI1B-204ENST00000554659 TDRD12Q587J7 1177 aaKnown RBP16.05■□□□□ 0.16
VTI1B-204ENST00000554659 CCDC178Q5BJE1 867 aa16.05■□□□□ 0.16
VTI1B-204ENST00000554659 TMX1Q9H3N1 280 aa16.05■□□□□ 0.16
VTI1B-204ENST00000554659 GSTTP1A0A1W2PQM5 241 aa16.05■□□□□ 0.16
VTI1B-204ENST00000554659 MTIF2P46199 727 aaKnown RBP16.05■□□□□ 0.16
VTI1B-204ENST00000554659 GNG11P61952 73 aa16.05■□□□□ 0.16
VTI1B-204ENST00000554659 SMC1AQ14683 1233 aaKnown RBP16.05■□□□□ 0.16
VTI1B-204ENST00000554659 ANO6Q4KMQ2 910 aa16.05■□□□□ 0.16
VTI1B-204ENST00000554659 EHBP1Q8NDI1 1231 aa16.05■□□□□ 0.16
VTI1B-204ENST00000554659 KCNG4Q8TDN1 519 aa16.05■□□□□ 0.16
VTI1B-204ENST00000554659 PANK2Q9BZ23 570 aa16.05■□□□□ 0.16
VTI1B-204ENST00000554659 F13A1P00488 732 aa16.05■□□□□ 0.16
VTI1B-204ENST00000554659 TUBB4AP04350 444 aa16.05■□□□□ 0.16
VTI1B-204ENST00000554659 KRT222Q8N1A0 295 aa16.05■□□□□ 0.16
VTI1B-204ENST00000554659 SPECC1Q5M775 1068 aa16.05■□□□□ 0.16
VTI1B-204ENST00000554659 TRMT112Q9UI30 125 aaKnown RBP16.05■□□□□ 0.16
VTI1B-204ENST00000554659 PRAG1Q86YV5 1406 aa16.04■□□□□ 0.16
VTI1B-204ENST00000554659 SPDYE4A6NLX3 237 aa16.04■□□□□ 0.16
VTI1B-204ENST00000554659 NEBLO76041 1014 aa16.04■□□□□ 0.16
VTI1B-204ENST00000554659 DZIP1Q86YF9 867 aaKnown RBP16.04■□□□□ 0.16
VTI1B-204ENST00000554659 ZNF444Q8N0Y2 327 aaPredicted RBP16.04■□□□□ 0.16
VTI1B-204ENST00000554659 GOPCQ9HD26 462 aa16.04■□□□□ 0.16
VTI1B-204ENST00000554659 BICDL1Q6ZP65 573 aa16.04■□□□□ 0.16
VTI1B-204ENST00000554659 CCDC12Q8WUD4 166 aaPredicted RBP16.04■□□□□ 0.16
VTI1B-204ENST00000554659 BRF1Q92994 677 aa16.04■□□□□ 0.16
VTI1B-204ENST00000554659 TNIP1Q15025 636 aa16.04■□□□□ 0.16
VTI1B-204ENST00000554659 CWC25Q9NXE8 425 aaPredicted RBP16.04■□□□□ 0.16
VTI1B-204ENST00000554659 UGGT2Q9NYU1 1516 aa16.04■□□□□ 0.16
VTI1B-204ENST00000554659 GPATCH8Q9UKJ3 1502 aaKnown RBP16.04■□□□□ 0.16
VTI1B-204ENST00000554659 SKILP12757 684 aa16.04■□□□□ 0.16
VTI1B-204ENST00000554659 SYKP43405 635 aa16.04■□□□□ 0.16
VTI1B-204ENST00000554659 TCP11L1Q9NUJ3 509 aa16.04■□□□□ 0.16
VTI1B-204ENST00000554659 ATP8B2P98198 1209 aa16.03■□□□□ 0.16
VTI1B-204ENST00000554659 CTR9Q6PD62 1173 aa16.03■□□□□ 0.16
VTI1B-204ENST00000554659 NECAB1Q8N987 351 aa16.03■□□□□ 0.16
VTI1B-204ENST00000554659 GCOM1H8Y6P7 765 aaPredicted RBP16.03■□□□□ 0.16
VTI1B-204ENST00000554659 CCDC175P0C221 793 aa16.03■□□□□ 0.16
VTI1B-204ENST00000554659 MYZAPP0CAP1 466 aa16.03■□□□□ 0.16
VTI1B-204ENST00000554659 KIF5BP33176 963 aa16.03■□□□□ 0.16
VTI1B-204ENST00000554659 RBM25P49756 843 aaKnown RBP16.03■□□□□ 0.16
VTI1B-204ENST00000554659 PTPRKQ15262 1439 aa16.03■□□□□ 0.16
VTI1B-204ENST00000554659 UBE4AQ14139 1066 aa16.03■□□□□ 0.16
VTI1B-204ENST00000554659 CCDC186Q7Z3E2 898 aa16.03■□□□□ 0.16
VTI1B-204ENST00000554659 RBM8AQ9Y5S9 174 aaKnown RBP16.03■□□□□ 0.16
VTI1B-204ENST00000554659 MICU3Q86XE3 530 aa16.03■□□□□ 0.16
VTI1B-204ENST00000554659 MRPS27Q92552 414 aaKnown RBP16.03■□□□□ 0.16
VTI1B-204ENST00000554659 AMOTL2Q9Y2J4 779 aa16.03■□□□□ 0.16
VTI1B-204ENST00000554659 PIK3C2GO75747 1445 aa16.02■□□□□ 0.16
VTI1B-204ENST00000554659 MPHOSPH10O00566 681 aaKnown RBP16.02■□□□□ 0.16
VTI1B-204ENST00000554659 UBASH3AP57075 661 aa16.02■□□□□ 0.16
VTI1B-204ENST00000554659 CALML4Q96GE6 196 aa16.02■□□□□ 0.16
VTI1B-204ENST00000554659 LMAN1P49257 510 aa16.02■□□□□ 0.16
VTI1B-204ENST00000554659 MATR3P43243 847 aaKnown RBP eCLIP16.02■□□□□ 0.15
VTI1B-204ENST00000554659 ZNF830Q96NB3 372 aaPredicted RBP16.02■□□□□ 0.15
VTI1B-204ENST00000554659 MFSD6Q6ZSS7 791 aa16.02■□□□□ 0.15
VTI1B-204ENST00000554659 UBE3BQ7Z3V4 1068 aa16.02■□□□□ 0.15
VTI1B-204ENST00000554659 CTAGE1Q96RT6 745 aa16.02■□□□□ 0.15
VTI1B-204ENST00000554659 BMP15O95972 392 aa16.01■□□□□ 0.15
VTI1B-204ENST00000554659 ZFYP08048 801 aaPredicted RBP16.01■□□□□ 0.15
VTI1B-204ENST00000554659 PRIM1P49642 420 aaKnown RBP16.01■□□□□ 0.15
VTI1B-204ENST00000554659 RMND1Q9NWS8 449 aa16.01■□□□□ 0.15
VTI1B-204ENST00000554659 SLC26A6Q9BXS9 759 aa16.01■□□□□ 0.15
VTI1B-204ENST00000554659 DACT1Q9NYF0 836 aa16.01■□□□□ 0.15
VTI1B-204ENST00000554659 HAND2P61296 217 aa16.01■□□□□ 0.15
VTI1B-204ENST00000554659 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.01■□□□□ 0.15
VTI1B-204ENST00000554659 DCTPP1Q9H773 170 aa16.01■□□□□ 0.15
VTI1B-204ENST00000554659 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.01■□□□□ 0.155e-7■■□□□ 12.2
VTI1B-204ENST00000554659 ALDH1L1O75891 902 aa16.01■□□□□ 0.15
VTI1B-204ENST00000554659 HLTFQ14527 1009 aaKnown RBP eCLIP16.01■□□□□ 0.15
VTI1B-204ENST00000554659 INTS4Q96HW7 963 aaKnown RBP16.01■□□□□ 0.15
VTI1B-204ENST00000554659 TMOD2Q9NZR1 351 aa16.01■□□□□ 0.15
VTI1B-204ENST00000554659 SRRTQ9BXP5 876 aaKnown RBP16■□□□□ 0.15
VTI1B-204ENST00000554659 TEX13AQ9BXU3 409 aaPredicted RBP16■□□□□ 0.15
VTI1B-204ENST00000554659 KLF18A0A0U1RQI7 1052 aa16■□□□□ 0.15
VTI1B-204ENST00000554659 UBA5Q9GZZ9 404 aa16■□□□□ 0.15
VTI1B-204ENST00000554659 HMGB2P26583 209 aaKnown RBP16■□□□□ 0.15
VTI1B-204ENST00000554659 UBA7P41226 1012 aa16■□□□□ 0.15
VTI1B-204ENST00000554659 LDHAL6AQ6ZMR3 332 aa16■□□□□ 0.15
VTI1B-204ENST00000554659 IFNL2Q8IZJ0 200 aa16■□□□□ 0.15
VTI1B-204ENST00000554659 TAOK3Q9H2K8 898 aa16■□□□□ 0.15
VTI1B-204ENST00000554659 EIF2AK4Q9P2K8 1649 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms