RNA–Protein interactions for RNA: ENST00000554417.1

HNRNPC-210, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-210ENST00000554417 DUSP27Q5VZP5 1158 aa9.38□□□□□ -0.91
HNRNPC-210ENST00000554417 DNAJC10Q8IXB1 793 aa9.38□□□□□ -0.91
HNRNPC-210ENST00000554417 TRMT2AQ8IZ69 625 aaKnown RBP9.38□□□□□ -0.91
HNRNPC-210ENST00000554417 LRRC4BQ9NT99 713 aa9.38□□□□□ -0.91
HNRNPC-210ENST00000554417 HYPKQ9NX55 129 aa9.38□□□□□ -0.91
HNRNPC-210ENST00000554417 LY75O60449 1722 aa9.38□□□□□ -0.91
HNRNPC-210ENST00000554417 PAPPAQ13219 1627 aa9.38□□□□□ -0.91
HNRNPC-210ENST00000554417 RFC4P35249 363 aa9.37□□□□□ -0.91
HNRNPC-210ENST00000554417 DDX21Q9NR30 783 aaKnown RBP eCLIP9.37□□□□□ -0.91
HNRNPC-210ENST00000554417 ZNF652Q9Y2D9 606 aa9.37□□□□□ -0.91
HNRNPC-210ENST00000554417 GNPATO15228 680 aa9.36□□□□□ -0.91
HNRNPC-210ENST00000554417 KCNQ3O43525 872 aa9.36□□□□□ -0.91
HNRNPC-210ENST00000554417 ZPR1O75312 459 aa9.36□□□□□ -0.91
HNRNPC-210ENST00000554417 DDX58O95786 925 aaKnown RBP9.36□□□□□ -0.91
HNRNPC-210ENST00000554417 EIF5P55010 431 aaKnown RBP9.36□□□□□ -0.91
HNRNPC-210ENST00000554417 EXOSC9Q06265 439 aaKnown RBP9.36□□□□□ -0.91
HNRNPC-210ENST00000554417 ITPK1Q13572 414 aa9.36□□□□□ -0.91
HNRNPC-210ENST00000554417 ALDH1L2Q3SY69 923 aa9.36□□□□□ -0.91
HNRNPC-210ENST00000554417 CLEC4GQ6UXB4 293 aa9.36□□□□□ -0.91
HNRNPC-210ENST00000554417 LINC00116Q8NCU8 138 aa9.36□□□□□ -0.91
HNRNPC-210ENST00000554417 SLC4A9Q96Q91 983 aa9.36□□□□□ -0.91
HNRNPC-210ENST00000554417 USP16Q9Y5T5 823 aa9.36□□□□□ -0.91
HNRNPC-210ENST00000554417 KDM3BQ7LBC6 1761 aa9.36□□□□□ -0.91
HNRNPC-210ENST00000554417 UBR2Q8IWV8 1755 aa9.36□□□□□ -0.91
HNRNPC-210ENST00000554417 C5P01031 1676 aa9.36□□□□□ -0.91
HNRNPC-210ENST00000554417 ERVV-1B6SEH8 477 aa9.35□□□□□ -0.91
HNRNPC-210ENST00000554417 VAMP4O75379 141 aa9.35□□□□□ -0.91
HNRNPC-210ENST00000554417 PPP1R37O75864 691 aa9.35□□□□□ -0.91
HNRNPC-210ENST00000554417 EIF2S2P20042 333 aaKnown RBP9.35□□□□□ -0.91
HNRNPC-210ENST00000554417 HSP90AB3PQ58FF7 597 aa9.35□□□□□ -0.91
HNRNPC-210ENST00000554417 INTS5Q6P9B9 1019 aaKnown RBP9.35□□□□□ -0.91
HNRNPC-210ENST00000554417 KIF6Q6ZMV9 814 aa9.35□□□□□ -0.91
HNRNPC-210ENST00000554417 PLPP6Q8IY26 295 aa9.35□□□□□ -0.91
HNRNPC-210ENST00000554417 NLGN1Q8N2Q7 840 aa9.35□□□□□ -0.91
HNRNPC-210ENST00000554417 TSR2Q969E8 191 aaKnown RBP9.35□□□□□ -0.91
HNRNPC-210ENST00000554417 VIRMAQ69YN4 1812 aaKnown RBP9.35□□□□□ -0.91
HNRNPC-210ENST00000554417 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.34□□□□□ -0.91
HNRNPC-210ENST00000554417 TBC1D12O60347 775 aa9.34□□□□□ -0.91
HNRNPC-210ENST00000554417 CANXP27824 592 aaKnown RBP9.34□□□□□ -0.91
HNRNPC-210ENST00000554417 C8orf58Q8NAV2 365 aa9.34□□□□□ -0.91
HNRNPC-210ENST00000554417 NARFQ9UHQ1 456 aa9.34□□□□□ -0.91
HNRNPC-210ENST00000554417 RREB1Q92766 1687 aa9.34□□□□□ -0.91
HNRNPC-210ENST00000554417 ELL2O00472 640 aaPredicted RBP9.33□□□□□ -0.92
HNRNPC-210ENST00000554417 IPO8O15397 1037 aaKnown RBP9.33□□□□□ -0.92
HNRNPC-210ENST00000554417 A1BGP04217 495 aa9.33□□□□□ -0.92
HNRNPC-210ENST00000554417 BRPF1P55201 1214 aaPredicted RBP9.33□□□□□ -0.92
HNRNPC-210ENST00000554417 MTFR1LQ9H019 292 aa9.33□□□□□ -0.92
HNRNPC-210ENST00000554417 BCL2L12Q9HB09 334 aa9.33□□□□□ -0.92
HNRNPC-210ENST00000554417 ZBTB1Q9Y2K1 713 aa9.33□□□□□ -0.92
HNRNPC-210ENST00000554417 C4BP0C0L5 1744 aa9.33□□□□□ -0.92
HNRNPC-210ENST00000554417 EP400Q96L91 3159 aa9.32□□□□□ -0.92
HNRNPC-210ENST00000554417 MS4A1P11836 297 aa9.32□□□□□ -0.92
HNRNPC-210ENST00000554417 HSP90B1P14625 803 aaKnown RBP9.32□□□□□ -0.92
HNRNPC-210ENST00000554417 POLD1P28340 1107 aa9.32□□□□□ -0.92
HNRNPC-210ENST00000554417 Q6ZNB5 142 aa9.32□□□□□ -0.92
HNRNPC-210ENST00000554417 DZIP3Q86Y13 1208 aaKnown RBP9.32□□□□□ -0.92
HNRNPC-210ENST00000554417 ARHGEF1Q92888 912 aaKnown RBP9.32□□□□□ -0.92
HNRNPC-210ENST00000554417 WNT2BQ93097 391 aa9.32□□□□□ -0.92
HNRNPC-210ENST00000554417 CDCA7LQ96GN5 454 aa9.32□□□□□ -0.92
HNRNPC-210ENST00000554417 COL15A1P39059 1388 aa9.32□□□□□ -0.92
HNRNPC-210ENST00000554417 PTPRCP08575 1304 aa9.31□□□□□ -0.92
HNRNPC-210ENST00000554417 KCNQ4P56696 695 aa9.31□□□□□ -0.92
HNRNPC-210ENST00000554417 NEXNQ0ZGT2 675 aa9.31□□□□□ -0.92
HNRNPC-210ENST00000554417 R3HDM1Q15032 1099 aaKnown RBP9.31□□□□□ -0.92
HNRNPC-210ENST00000554417 ZNF827Q17R98 1081 aa9.31□□□□□ -0.92
HNRNPC-210ENST00000554417 TSPYL6Q8N831 410 aa9.31□□□□□ -0.92
HNRNPC-210ENST00000554417 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.31□□□□□ -0.92
HNRNPC-210ENST00000554417 PLBD2Q8NHP8 589 aa9.31□□□□□ -0.92
HNRNPC-210ENST00000554417 ARHGAP45Q92619 1136 aa9.31□□□□□ -0.92
HNRNPC-210ENST00000554417 ARXQ96QS3 562 aa9.31□□□□□ -0.92
HNRNPC-210ENST00000554417 GPHNQ9NQX3 736 aaPredicted RBP9.31□□□□□ -0.92
HNRNPC-210ENST00000554417 CHPF2Q9P2E5 772 aa9.31□□□□□ -0.92
HNRNPC-210ENST00000554417 MAP3K15Q6ZN16 1313 aa9.31□□□□□ -0.92
HNRNPC-210ENST00000554417 PNPLA7Q6ZV29 1317 aa9.31□□□□□ -0.92
HNRNPC-210ENST00000554417 KIF16BQ96L93 1317 aa9.31□□□□□ -0.92
HNRNPC-210ENST00000554417 USP42Q9H9J4 1324 aaKnown RBP9.31□□□□□ -0.92
HNRNPC-210ENST00000554417 PRAMEF22A3QJZ6 481 aa9.3□□□□□ -0.92
HNRNPC-210ENST00000554417 NBPF26B4DH59 902 aa9.3□□□□□ -0.92
HNRNPC-210ENST00000554417 PHF14O94880 888 aa9.3□□□□□ -0.92
HNRNPC-210ENST00000554417 ITGBL1O95965 494 aaPredicted RBP9.3□□□□□ -0.92
HNRNPC-210ENST00000554417 MYL6BP14649 208 aa9.3□□□□□ -0.92
HNRNPC-210ENST00000554417 PDIA6Q15084 440 aa9.3□□□□□ -0.92
HNRNPC-210ENST00000554417 NBPF10Q6P3W6 841 aaKnown RBP9.3□□□□□ -0.92
HNRNPC-210ENST00000554417 COPS6Q7L5N1 327 aa9.3□□□□□ -0.92
HNRNPC-210ENST00000554417 COL23A1Q86Y22 540 aaPredicted RBP9.3□□□□□ -0.92
HNRNPC-210ENST00000554417 NBPF15Q8N660 670 aa9.3□□□□□ -0.92
HNRNPC-210ENST00000554417 SPON1Q9HCB6 807 aa9.3□□□□□ -0.92
HNRNPC-210ENST00000554417 ANO8Q9HCE9 1232 aaPredicted RBP9.3□□□□□ -0.92
HNRNPC-210ENST00000554417 PDZRN3Q9UPQ7 1066 aa9.3□□□□□ -0.92
HNRNPC-210ENST00000554417 HDAC5Q9UQL6 1122 aa9.3□□□□□ -0.92
HNRNPC-210ENST00000554417 ZNF330Q9Y3S2 320 aaPredicted RBP9.3□□□□□ -0.92
HNRNPC-210ENST00000554417 COL5A3P25940 1745 aaPredicted RBP9.3□□□□□ -0.92
HNRNPC-210ENST00000554417 TJP1Q07157 1748 aa9.3□□□□□ -0.92
HNRNPC-210ENST00000554417 NUP188Q5SRE5 1749 aa9.3□□□□□ -0.92
HNRNPC-210ENST00000554417 RNF123Q5XPI4 1314 aa9.3□□□□□ -0.92
HNRNPC-210ENST00000554417 LAMB4A4D0S4 1761 aa9.29□□□□□ -0.92
HNRNPC-210ENST00000554417 TAF1LQ8IZX4 1826 aa9.29□□□□□ -0.92
HNRNPC-210ENST00000554417 QSER1Q2KHR3 1735 aa9.29□□□□□ -0.92
HNRNPC-210ENST00000554417 SENP3-EIF4A1A0A087X0R7 540 aa9.29□□□□□ -0.92
HNRNPC-210ENST00000554417 KRT24Q2M2I5 525 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms