RNA–Protein interactions for RNA: ENST00000554221.5

LINC00520-203, long intergenic non-protein coding RNA 520, humanhuman

TSL 3

Gene LINC00520, Length 348 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-203ENST00000554221 KLRG2A4D1S0 409 aaPredicted RBP8.65□□□□□ -1.02
LINC00520-203ENST00000554221 FKBP4Q02790 459 aaKnown RBP eCLIP8.65□□□□□ -1.02
LINC00520-203ENST00000554221 PPP1R42Q7Z4L9 355 aa8.65□□□□□ -1.02
LINC00520-203ENST00000554221 RPGRQ92834 1020 aaKnown RBP8.65□□□□□ -1.02
LINC00520-203ENST00000554221 ZNF428Q96B54 188 aa8.65□□□□□ -1.02
LINC00520-203ENST00000554221 KLRG1Q96E93 195 aa8.65□□□□□ -1.02
LINC00520-203ENST00000554221 RBM17Q96I25 401 aaKnown RBP8.65□□□□□ -1.02
LINC00520-203ENST00000554221 ADAMTS7Q9UKP4 1686 aa8.65□□□□□ -1.03
LINC00520-203ENST00000554221 LMOD3Q0VAK6 560 aa8.64□□□□□ -1.03
LINC00520-203ENST00000554221 EAPPQ56P03 285 aaPredicted RBP8.64□□□□□ -1.03
LINC00520-203ENST00000554221 GIGYF2Q6Y7W6 1299 aaKnown RBP8.64□□□□□ -1.03
LINC00520-203ENST00000554221 NLRP3Q96P20 1036 aa8.64□□□□□ -1.03
LINC00520-203ENST00000554221 TMX4Q9H1E5 349 aaPredicted RBP8.64□□□□□ -1.03
LINC00520-203ENST00000554221 ADAMTS8Q9UP79 889 aa8.64□□□□□ -1.03
LINC00520-203ENST00000554221 MYBBP1AQ9BQG0 1328 aaKnown RBP8.63□□□□□ -1.03
LINC00520-203ENST00000554221 LTBP3Q9NS15 1303 aa8.63□□□□□ -1.03
LINC00520-203ENST00000554221 RGL2O15211 777 aa8.63□□□□□ -1.03
LINC00520-203ENST00000554221 POTEIP0CG38 1075 aa8.63□□□□□ -1.03
LINC00520-203ENST00000554221 POTEJP0CG39 1038 aa8.63□□□□□ -1.03
LINC00520-203ENST00000554221 IARSP41252 1262 aaKnown RBP8.63□□□□□ -1.03
LINC00520-203ENST00000554221 PDIA6Q15084 440 aa8.63□□□□□ -1.03
LINC00520-203ENST00000554221 COPS6Q7L5N1 327 aa8.63□□□□□ -1.03
LINC00520-203ENST00000554221 ZNF34Q8IZ26 560 aa8.63□□□□□ -1.03
LINC00520-203ENST00000554221 JDP2Q8WYK2 163 aa8.63□□□□□ -1.03
LINC00520-203ENST00000554221 RUNDC1Q96C34 613 aa8.63□□□□□ -1.03
LINC00520-203ENST00000554221 UTP14AQ9BVJ6 771 aaKnown RBP8.63□□□□□ -1.03
LINC00520-203ENST00000554221 GJA3Q9Y6H8 435 aa8.63□□□□□ -1.03
LINC00520-203ENST00000554221 UBN2Q6ZU65 1347 aa8.62□□□□□ -1.03
LINC00520-203ENST00000554221 KRT24Q2M2I5 525 aa8.62□□□□□ -1.03
LINC00520-203ENST00000554221 PROSER3Q2NL68 480 aa8.62□□□□□ -1.03
LINC00520-203ENST00000554221 XAGE3Q8WTP9 111 aa8.62□□□□□ -1.03
LINC00520-203ENST00000554221 BABAM1Q9NWV8 329 aa8.62□□□□□ -1.03
LINC00520-203ENST00000554221 IQCA1LA6NCM1 817 aa8.61□□□□□ -1.03
LINC00520-203ENST00000554221 HCLS1P14317 486 aaPredicted RBP8.61□□□□□ -1.03
LINC00520-203ENST00000554221 EIF6P56537 245 aaKnown RBP8.61□□□□□ -1.03
LINC00520-203ENST00000554221 PARP10Q53GL7 1025 aa8.61□□□□□ -1.03
LINC00520-203ENST00000554221 C3orf67Q6ZVT6 689 aa8.61□□□□□ -1.03
LINC00520-203ENST00000554221 LARGE2Q8N3Y3 721 aa8.61□□□□□ -1.03
LINC00520-203ENST00000554221 TAF1DQ9H5J8 278 aaPredicted RBP8.61□□□□□ -1.03
LINC00520-203ENST00000554221 TRMT112Q9UI30 125 aaKnown RBP8.61□□□□□ -1.03
LINC00520-203ENST00000554221 HACL1Q9UJ83 578 aa8.61□□□□□ -1.03
LINC00520-203ENST00000554221 TRIM35Q9UPQ4 493 aa8.61□□□□□ -1.03
LINC00520-203ENST00000554221 AFDNP55196 1824 aaKnown RBP8.61□□□□□ -1.03
LINC00520-203ENST00000554221 UBR2Q8IWV8 1755 aa8.61□□□□□ -1.03
LINC00520-203ENST00000554221 ERBB4Q15303 1308 aa8.6□□□□□ -1.03
LINC00520-203ENST00000554221 ZNF541Q9H0D2 1346 aa8.6□□□□□ -1.03
LINC00520-203ENST00000554221 FZD9O00144 591 aa8.6□□□□□ -1.03
LINC00520-203ENST00000554221 ELL2O00472 640 aaPredicted RBP8.6□□□□□ -1.03
LINC00520-203ENST00000554221 CHL1O00533 1208 aa8.6□□□□□ -1.03
LINC00520-203ENST00000554221 PPEF1O14829 653 aaPredicted RBP8.6□□□□□ -1.03
LINC00520-203ENST00000554221 NTSR2O95665 410 aa8.6□□□□□ -1.03
LINC00520-203ENST00000554221 HOXA10P31260 410 aaPredicted RBP8.6□□□□□ -1.03
LINC00520-203ENST00000554221 EPHX2P34913 555 aa8.6□□□□□ -1.03
LINC00520-203ENST00000554221 CRY2Q49AN0 593 aa8.6□□□□□ -1.03
LINC00520-203ENST00000554221 RTL5Q5HYW3 569 aaPredicted RBP8.6□□□□□ -1.03
LINC00520-203ENST00000554221 LHX8Q68G74 356 aa8.6□□□□□ -1.03
LINC00520-203ENST00000554221 CC2D2BQ6DHV5 1058 aa8.6□□□□□ -1.03
LINC00520-203ENST00000554221 SLC51AQ86UW1 340 aa8.6□□□□□ -1.03
LINC00520-203ENST00000554221 CRAMP1Q96RY5 1269 aa8.6□□□□□ -1.03
LINC00520-203ENST00000554221 DDX21Q9NR30 783 aaKnown RBP eCLIP8.6□□□□□ -1.03
LINC00520-203ENST00000554221 MKRN1Q9UHC7 482 aaKnown RBP8.6□□□□□ -1.03
LINC00520-203ENST00000554221 NRXN2Q9P2S2 1712 aa8.6□□□□□ -1.03
LINC00520-203ENST00000554221 ABCC12Q96J65 1359 aa8.6□□□□□ -1.03
LINC00520-203ENST00000554221 BBOX1O75936 387 aa8.59□□□□□ -1.03
LINC00520-203ENST00000554221 TCIRG1Q13488 830 aa8.59□□□□□ -1.03
LINC00520-203ENST00000554221 HSP90AB3PQ58FF7 597 aa8.59□□□□□ -1.03
LINC00520-203ENST00000554221 SLC10A5Q5PT55 438 aa8.59□□□□□ -1.03
LINC00520-203ENST00000554221 COL13A1Q5TAT6 717 aaPredicted RBP8.59□□□□□ -1.03
LINC00520-203ENST00000554221 HDGFL1Q5TGJ6 251 aa8.59□□□□□ -1.03
LINC00520-203ENST00000554221 ANKRD13DQ6ZTN6 518 aa8.59□□□□□ -1.03
LINC00520-203ENST00000554221 DDX46Q7L014 1031 aaKnown RBP8.59□□□□□ -1.03
LINC00520-203ENST00000554221 LRP10Q7Z4F1 713 aa8.59□□□□□ -1.03
LINC00520-203ENST00000554221 PNMA8AQ86V59 439 aaPredicted RBP8.59□□□□□ -1.03
LINC00520-203ENST00000554221 NLRP10Q86W26 655 aa8.59□□□□□ -1.03
LINC00520-203ENST00000554221 LDHDQ86WU2 507 aa8.59□□□□□ -1.03
LINC00520-203ENST00000554221 JMYQ8N9B5 988 aa8.59□□□□□ -1.03
LINC00520-203ENST00000554221 DCBLD2Q96PD2 775 aa8.59□□□□□ -1.03
LINC00520-203ENST00000554221 PSMD1Q99460 953 aa8.59□□□□□ -1.03
LINC00520-203ENST00000554221 CHPF2Q9P2E5 772 aa8.59□□□□□ -1.03
LINC00520-203ENST00000554221 ARFGEF1Q9Y6D6 1849 aa8.59□□□□□ -1.03
LINC00520-203ENST00000554221 RNF123Q5XPI4 1314 aa8.58□□□□□ -1.04
LINC00520-203ENST00000554221 ATP5J2-PTCD1G3V325 749 aa8.58□□□□□ -1.04
LINC00520-203ENST00000554221 APAF1O14727 1248 aa8.58□□□□□ -1.04
LINC00520-203ENST00000554221 PPIP5K2O43314 1243 aa8.58□□□□□ -1.04
LINC00520-203ENST00000554221 LMOD1P29536 600 aaPredicted RBP8.58□□□□□ -1.04
LINC00520-203ENST00000554221 CLCN6P51797 869 aa8.58□□□□□ -1.04
LINC00520-203ENST00000554221 AOC3Q16853 763 aa8.58□□□□□ -1.04
LINC00520-203ENST00000554221 GRIPAP1Q4V328 841 aa8.58□□□□□ -1.04
LINC00520-203ENST00000554221 DUSP27Q5VZP5 1158 aa8.58□□□□□ -1.04
LINC00520-203ENST00000554221 MAP1SQ66K74 1059 aaPredicted RBP8.58□□□□□ -1.04
LINC00520-203ENST00000554221 DPP8Q6V1X1 898 aaPredicted RBP8.58□□□□□ -1.04
LINC00520-203ENST00000554221 NIM1KQ8IY84 436 aa8.58□□□□□ -1.04
LINC00520-203ENST00000554221 CNTROBQ8N137 903 aa8.58□□□□□ -1.04
LINC00520-203ENST00000554221 GPC2Q8N158 579 aa8.58□□□□□ -1.04
LINC00520-203ENST00000554221 FAM89AQ96GI7 184 aa8.58□□□□□ -1.04
LINC00520-203ENST00000554221 L3MBTL3Q96JM7 780 aaPredicted RBP8.58□□□□□ -1.04
LINC00520-203ENST00000554221 PRKRIP1Q9H875 184 aaPredicted RBP8.58□□□□□ -1.04
LINC00520-203ENST00000554221 BRCA1P38398 1863 aaKnown RBP8.57□□□□□ -1.04
LINC00520-203ENST00000554221 HSPA1AP0DMV8 641 aaKnown RBP8.57□□□□□ -1.04
LINC00520-203ENST00000554221 HSPA1BP0DMV9 641 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms