RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 CYP4F22Q6NT55 531 aa10.3□□□□□ -0.76
ABCD4-220ENST00000553998 PHACTR3Q96KR7 559 aa10.3□□□□□ -0.76
ABCD4-220ENST00000553998 BEGAINQ9BUH8 593 aa10.3□□□□□ -0.76
ABCD4-220ENST00000553998 VPS33BQ9H267 617 aa10.3□□□□□ -0.76
ABCD4-220ENST00000553998 PGAP2Q9UHJ9 254 aa10.3□□□□□ -0.76
ABCD4-220ENST00000553998 LMOD1P29536 600 aaPredicted RBP10.29□□□□□ -0.76
ABCD4-220ENST00000553998 HLFQ16534 295 aa10.29□□□□□ -0.76
ABCD4-220ENST00000553998 CC2D1BQ5T0F9 858 aaKnown RBP10.29□□□□□ -0.76
ABCD4-220ENST00000553998 SAPCD2Q86UD0 394 aa10.29□□□□□ -0.76
ABCD4-220ENST00000553998 RIC1Q4ADV7 1423 aa10.28□□□□□ -0.76
ABCD4-220ENST00000553998 ERVV-1B6SEH8 477 aa10.28□□□□□ -0.76
ABCD4-220ENST00000553998 CRAMP1Q96RY5 1269 aa10.28□□□□□ -0.76
ABCD4-220ENST00000553998 NYXQ9GZU5 481 aa10.28□□□□□ -0.76
ABCD4-220ENST00000553998 RSPH6AQ9H0K4 717 aa10.28□□□□□ -0.76
ABCD4-220ENST00000553998 GJA3Q9Y6H8 435 aa10.28□□□□□ -0.76
ABCD4-220ENST00000553998 COL4A5P29400 1685 aa10.28□□□□□ -0.76
ABCD4-220ENST00000553998 BCORQ6W2J9 1755 aa10.27□□□□□ -0.77
ABCD4-220ENST00000553998 TRAF5O00463 557 aa10.27□□□□□ -0.77
ABCD4-220ENST00000553998 U2SURPO15042 1029 aaKnown RBP10.27□□□□□ -0.77
ABCD4-220ENST00000553998 HTATSF1O43719 755 aaKnown RBP10.27□□□□□ -0.77
ABCD4-220ENST00000553998 AOC2O75106 756 aa10.27□□□□□ -0.77
ABCD4-220ENST00000553998 BRPF1P55201 1214 aaPredicted RBP10.27□□□□□ -0.77
ABCD4-220ENST00000553998 RALBP1Q15311 655 aa10.27□□□□□ -0.77
ABCD4-220ENST00000553998 MCOLN1Q9GZU1 580 aa10.27□□□□□ -0.77
ABCD4-220ENST00000553998 ADARB2Q9NS39 739 aaKnown RBP10.27□□□□□ -0.77
ABCD4-220ENST00000553998 LTBP1Q14766 1721 aa10.27□□□□□ -0.77
ABCD4-220ENST00000553998 IBTKQ9P2D0 1353 aaPredicted RBP10.26□□□□□ -0.77
ABCD4-220ENST00000553998 SIPA1L3O60292 1781 aaPredicted RBP10.26□□□□□ -0.77
ABCD4-220ENST00000553998 GTF2E1P29083 439 aaPredicted RBP10.26□□□□□ -0.77
ABCD4-220ENST00000553998 PRKAR2BP31323 418 aa10.26□□□□□ -0.77
ABCD4-220ENST00000553998 LARGE2Q8N3Y3 721 aa10.26□□□□□ -0.77
ABCD4-220ENST00000553998 ZC3H15Q8WU90 426 aaKnown RBP10.26□□□□□ -0.77
ABCD4-220ENST00000553998 RTFDC1Q9BY42 306 aaPredicted RBP10.26□□□□□ -0.77
ABCD4-220ENST00000553998 GPRC5DQ9NZD1 345 aa10.26□□□□□ -0.77
ABCD4-220ENST00000553998 ABCC12Q96J65 1359 aa10.26□□□□□ -0.77
ABCD4-220ENST00000553998 FAM177BA6PVY3 158 aa10.25□□□□□ -0.77
ABCD4-220ENST00000553998 PAXIP1Q6ZW49 1069 aaPredicted RBP10.25□□□□□ -0.77
ABCD4-220ENST00000553998 NUTM1Q86Y26 1132 aa10.25□□□□□ -0.77
ABCD4-220ENST00000553998 RBM17Q96I25 401 aaKnown RBP10.25□□□□□ -0.77
ABCD4-220ENST00000553998 CELF2O95319 508 aaKnown RBP10.24□□□□□ -0.77
ABCD4-220ENST00000553998 CXCL9Q07325 125 aa10.24□□□□□ -0.77
ABCD4-220ENST00000553998 TAF7Q15545 349 aaPredicted RBP10.24□□□□□ -0.77
ABCD4-220ENST00000553998 SLC10A5Q5PT55 438 aa10.24□□□□□ -0.77
ABCD4-220ENST00000553998 MCM10Q7L590 875 aa10.24□□□□□ -0.77
ABCD4-220ENST00000553998 NIM1KQ8IY84 436 aa10.24□□□□□ -0.77
ABCD4-220ENST00000553998 ZNF34Q8IZ26 560 aa10.24□□□□□ -0.77
ABCD4-220ENST00000553998 RTF1Q92541 710 aaKnown RBP10.24□□□□□ -0.77
ABCD4-220ENST00000553998 RPGRQ92834 1020 aaKnown RBP10.24□□□□□ -0.77
ABCD4-220ENST00000553998 TSKSQ9UJT2 592 aa10.24□□□□□ -0.77
ABCD4-220ENST00000553998 ZNRF3Q9ULT6 936 aa10.24□□□□□ -0.77
ABCD4-220ENST00000553998 MAP3K15Q6ZN16 1313 aa10.24□□□□□ -0.77
ABCD4-220ENST00000553998 CDHR2Q9BYE9 1310 aa10.24□□□□□ -0.77
ABCD4-220ENST00000553998 TNRC18O15417 2968 aaPredicted RBP10.23□□□□□ -0.77
ABCD4-220ENST00000553998 PPEF1O14829 653 aaPredicted RBP10.23□□□□□ -0.77
ABCD4-220ENST00000553998 HIRAP54198 1017 aaPredicted RBP10.23□□□□□ -0.77
ABCD4-220ENST00000553998 NOGQ13253 232 aa10.23□□□□□ -0.77
ABCD4-220ENST00000553998 SUSD4Q5VX71 490 aa10.23□□□□□ -0.77
ABCD4-220ENST00000553998 GLIS2Q9BZE0 524 aaPredicted RBP10.23□□□□□ -0.77
ABCD4-220ENST00000553998 ATP6V0A2Q9Y487 856 aa10.23□□□□□ -0.77
ABCD4-220ENST00000553998 UBN2Q6ZU65 1347 aa10.23□□□□□ -0.77
ABCD4-220ENST00000553998 CACNA1SQ13698 1873 aa10.22□□□□□ -0.77
ABCD4-220ENST00000553998 PPIP5K2O43314 1243 aa10.22□□□□□ -0.77
ABCD4-220ENST00000553998 NTSR2O95665 410 aa10.22□□□□□ -0.77
ABCD4-220ENST00000553998 PPP2R1AP30153 589 aa10.22□□□□□ -0.77
ABCD4-220ENST00000553998 GMPSP49915 693 aaPredicted RBP10.22□□□□□ -0.77
ABCD4-220ENST00000553998 GRM1Q13255 1194 aa10.22□□□□□ -0.77
ABCD4-220ENST00000553998 DGKZQ13574 1117 aa10.22□□□□□ -0.77
ABCD4-220ENST00000553998 CNGB1Q14028 1251 aaPredicted RBP10.22□□□□□ -0.77
ABCD4-220ENST00000553998 AOC3Q16853 763 aa10.22□□□□□ -0.77
ABCD4-220ENST00000553998 CIAPIN1Q6FI81 312 aa10.22□□□□□ -0.77
ABCD4-220ENST00000553998 CDC37L1Q7L3B6 337 aa10.22□□□□□ -0.77
ABCD4-220ENST00000553998 SLC51AQ86UW1 340 aa10.22□□□□□ -0.77
ABCD4-220ENST00000553998 SUPT20HQ8NEM7 779 aa10.22□□□□□ -0.77
ABCD4-220ENST00000553998 PRKRIP1Q9H875 184 aaPredicted RBP10.22□□□□□ -0.77
ABCD4-220ENST00000553998 BBOX1O75936 387 aa10.21□□□□□ -0.77
ABCD4-220ENST00000553998 KIAA2012Q0VF49 1180 aa10.21□□□□□ -0.77
ABCD4-220ENST00000553998 DCTN1Q14203 1278 aa10.21□□□□□ -0.77
ABCD4-220ENST00000553998 GIGYF2Q6Y7W6 1299 aaKnown RBP10.21□□□□□ -0.77
ABCD4-220ENST00000553998 TTLL7Q6ZT98 887 aa10.21□□□□□ -0.77
ABCD4-220ENST00000553998 C3orf67Q6ZVT6 689 aa10.21□□□□□ -0.77
ABCD4-220ENST00000553998 PNISRQ8TF01 805 aaKnown RBP10.21□□□□□ -0.77
ABCD4-220ENST00000553998 SAGE1Q9NXZ1 904 aa10.21□□□□□ -0.77
ABCD4-220ENST00000553998 NUDCQ9Y266 331 aa10.21□□□□□ -0.77
ABCD4-220ENST00000553998 ANP32CO43423 234 aa10.2□□□□□ -0.78
ABCD4-220ENST00000553998 EIF4A1P60842 406 aaKnown RBP10.2□□□□□ -0.78
ABCD4-220ENST00000553998 TNIP1Q15025 636 aa10.2□□□□□ -0.78
ABCD4-220ENST00000553998 PARP10Q53GL7 1025 aa10.2□□□□□ -0.78
ABCD4-220ENST00000553998 KIF6Q6ZMV9 814 aa10.2□□□□□ -0.78
ABCD4-220ENST00000553998 SP8Q8IXZ3 490 aa10.2□□□□□ -0.78
ABCD4-220ENST00000553998 CFAP53Q96M91 514 aa10.2□□□□□ -0.78
ABCD4-220ENST00000553998 NLRP3Q96P20 1036 aa10.2□□□□□ -0.78
ABCD4-220ENST00000553998 ZIC5Q96T25 663 aa10.2□□□□□ -0.78
ABCD4-220ENST00000553998 MYBBP1AQ9BQG0 1328 aaKnown RBP10.2□□□□□ -0.78
ABCD4-220ENST00000553998 ERBB4Q15303 1308 aa10.19□□□□□ -0.78
ABCD4-220ENST00000553998 FAM155AB1AL88 458 aaPredicted RBP10.19□□□□□ -0.78
ABCD4-220ENST00000553998 LRP10Q7Z4F1 713 aa10.19□□□□□ -0.78
ABCD4-220ENST00000553998 PPP1R42Q7Z4L9 355 aa10.19□□□□□ -0.78
ABCD4-220ENST00000553998 DPF2Q92785 391 aa10.19□□□□□ -0.78
ABCD4-220ENST00000553998 TMX4Q9H1E5 349 aaPredicted RBP10.19□□□□□ -0.78
ABCD4-220ENST00000553998 MIS18AQ9NYP9 233 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms