RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 UTYO14607 1347 aa10.85□□□□□ -0.67
AL049839.2-201ENST00000553947 DDX58O95786 925 aaKnown RBP10.85□□□□□ -0.67
AL049839.2-201ENST00000553947 MCTP1Q6DN14 999 aa10.85□□□□□ -0.67
AL049839.2-201ENST00000553947 PDCL2Q8N4E4 241 aa10.85□□□□□ -0.67
AL049839.2-201ENST00000553947 MPNDQ8N594 471 aa10.85□□□□□ -0.67
AL049839.2-201ENST00000553947 DCAF5Q96JK2 942 aa10.85□□□□□ -0.67
AL049839.2-201ENST00000553947 HSP90AB4PQ58FF6 505 aa10.84□□□□□ -0.67
AL049839.2-201ENST00000553947 KIF3AQ9Y496 699 aa10.84□□□□□ -0.67
AL049839.2-201ENST00000553947 CPDO75976 1380 aa10.84□□□□□ -0.67
AL049839.2-201ENST00000553947 SASH1O94885 1247 aa10.84□□□□□ -0.67
AL049839.2-201ENST00000553947 HMGN5P82970 282 aaKnown RBP10.84□□□□□ -0.67
AL049839.2-201ENST00000553947 EPHA10Q5JZY3 1008 aa10.84□□□□□ -0.67
AL049839.2-201ENST00000553947 KLHDC4Q8TBB5 520 aa10.84□□□□□ -0.67
AL049839.2-201ENST00000553947 MYD88Q99836 296 aa10.84□□□□□ -0.67
AL049839.2-201ENST00000553947 MRC1P22897 1456 aa10.83□□□□□ -0.67
AL049839.2-201ENST00000553947 NEURL1BA8MQ27 555 aa10.83□□□□□ -0.68
AL049839.2-201ENST00000553947 CYP2E1P05181 493 aaPredicted RBP10.83□□□□□ -0.68
AL049839.2-201ENST00000553947 RNF214Q8ND24 703 aa10.83□□□□□ -0.68
AL049839.2-201ENST00000553947 PKD1L3Q7Z443 1732 aa10.83□□□□□ -0.68
AL049839.2-201ENST00000553947 ABCC6O95255 1503 aa10.83□□□□□ -0.68
AL049839.2-201ENST00000553947 USP42Q9H9J4 1324 aaKnown RBP10.83□□□□□ -0.68
AL049839.2-201ENST00000553947 BAG4O95429 457 aaKnown RBP10.83□□□□□ -0.68
AL049839.2-201ENST00000553947 SNRPA1P09661 255 aaKnown RBP10.83□□□□□ -0.68
AL049839.2-201ENST00000553947 PRIM1P49642 420 aaKnown RBP10.83□□□□□ -0.68
AL049839.2-201ENST00000553947 ZSCAN23Q3MJ62 389 aa10.83□□□□□ -0.68
AL049839.2-201ENST00000553947 LARP1Q6PKG0 1096 aaKnown RBP10.83□□□□□ -0.68
AL049839.2-201ENST00000553947 NOL8Q76FK4 1167 aaKnown RBP10.83□□□□□ -0.68
AL049839.2-201ENST00000553947 TTC5Q8N0Z6 440 aa10.83□□□□□ -0.68
AL049839.2-201ENST00000553947 CLASRPQ8N2M8 674 aaKnown RBP10.83□□□□□ -0.68
AL049839.2-201ENST00000553947 UPF3BQ9BZI7 483 aaKnown RBP10.83□□□□□ -0.68
AL049839.2-201ENST00000553947 SGSM2O43147 1006 aa10.83□□□□□ -0.68
AL049839.2-201ENST00000553947 CABP4P57796 275 aa10.83□□□□□ -0.68
AL049839.2-201ENST00000553947 GCKRQ14397 625 aa10.83□□□□□ -0.68
AL049839.2-201ENST00000553947 ZNF710Q8N1W2 664 aa10.83□□□□□ -0.68
AL049839.2-201ENST00000553947 TMX3Q96JJ7 454 aa10.83□□□□□ -0.68
AL049839.2-201ENST00000553947 ZDHHC9Q9Y397 364 aa10.83□□□□□ -0.68
AL049839.2-201ENST00000553947 CNTROBQ8N137 903 aa10.82□□□□□ -0.68
AL049839.2-201ENST00000553947 METTL22Q9BUU2 404 aaPredicted RBP10.82□□□□□ -0.68
AL049839.2-201ENST00000553947 SIL1Q9H173 461 aa10.82□□□□□ -0.68
AL049839.2-201ENST00000553947 MCCP23508 829 aa10.82□□□□□ -0.68
AL049839.2-201ENST00000553947 HSPA4P34932 840 aa10.82□□□□□ -0.68
AL049839.2-201ENST00000553947 CWC27Q6UX04 472 aaKnown RBP10.82□□□□□ -0.68
AL049839.2-201ENST00000553947 CLEC17AQ6ZS10 378 aa10.82□□□□□ -0.68
AL049839.2-201ENST00000553947 ANKRD13DQ6ZTN6 518 aa10.82□□□□□ -0.68
AL049839.2-201ENST00000553947 EAF2Q96CJ1 260 aaPredicted RBP10.82□□□□□ -0.68
AL049839.2-201ENST00000553947 FMNL2Q96PY5 1086 aa10.82□□□□□ -0.68
AL049839.2-201ENST00000553947 PRDM11Q9NQV5 511 aa10.82□□□□□ -0.68
AL049839.2-201ENST00000553947 TTC41PQ6P2S7 1318 aa10.82□□□□□ -0.68
AL049839.2-201ENST00000553947 ZNF335Q9H4Z2 1342 aaPredicted RBP10.82□□□□□ -0.68
AL049839.2-201ENST00000553947 GLI3P10071 1580 aa10.81□□□□□ -0.68
AL049839.2-201ENST00000553947 U2AF2P26368 475 aaKnown RBP eCLIP10.81□□□□□ -0.681e-11■□□□□ 9.4
AL049839.2-201ENST00000553947 ANAPC15P60006 121 aa10.81□□□□□ -0.68
AL049839.2-201ENST00000553947 AACSQ86V21 672 aa10.81□□□□□ -0.68
AL049839.2-201ENST00000553947 IL17RAQ96F46 866 aa10.81□□□□□ -0.68
AL049839.2-201ENST00000553947 CHAMP1Q96JM3 812 aa10.81□□□□□ -0.68
AL049839.2-201ENST00000553947 PDLIM2Q96JY6 352 aa10.81□□□□□ -0.68
AL049839.2-201ENST00000553947 PRIMPOLQ96LW4 560 aa10.81□□□□□ -0.68
AL049839.2-201ENST00000553947 LSG1Q9H089 658 aaKnown RBP10.81□□□□□ -0.68
AL049839.2-201ENST00000553947 TLR7Q9NYK1 1049 aaKnown RBP10.81□□□□□ -0.68
AL049839.2-201ENST00000553947 GLRX3O76003 335 aaKnown RBP10.81□□□□□ -0.68
AL049839.2-201ENST00000553947 ZNF445P59923 1031 aa10.81□□□□□ -0.68
AL049839.2-201ENST00000553947 TOM1L2Q6ZVM7 507 aa10.81□□□□□ -0.68
AL049839.2-201ENST00000553947 ZFP91Q96JP5 570 aaPredicted RBP10.81□□□□□ -0.68
AL049839.2-201ENST00000553947 CCDC8Q9H0W5 538 aaPredicted RBP10.81□□□□□ -0.68
AL049839.2-201ENST00000553947 ECHDC1Q9NTX5 307 aa10.81□□□□□ -0.68
AL049839.2-201ENST00000553947 ATP5J2-PTCD1G3V325 749 aa10.81□□□□□ -0.68
AL049839.2-201ENST00000553947 PTCD1O75127 700 aaKnown RBP10.81□□□□□ -0.68
AL049839.2-201ENST00000553947 IFIT2P09913 472 aaKnown RBP10.81□□□□□ -0.68
AL049839.2-201ENST00000553947 NEXNQ0ZGT2 675 aa10.81□□□□□ -0.68
AL049839.2-201ENST00000553947 CWC22Q9HCG8 908 aaKnown RBP10.81□□□□□ -0.68
AL049839.2-201ENST00000553947 SLAIN2Q9P270 581 aa10.81□□□□□ -0.68
AL049839.2-201ENST00000553947 WDR17Q8IZU2 1322 aa10.8□□□□□ -0.68
AL049839.2-201ENST00000553947 NUCB2P80303 420 aa10.8□□□□□ -0.68
AL049839.2-201ENST00000553947 CERS3Q8IU89 383 aa10.8□□□□□ -0.68
AL049839.2-201ENST00000553947 RASEFQ8IZ41 740 aa10.8□□□□□ -0.68
AL049839.2-201ENST00000553947 SOS2Q07890 1332 aaPredicted RBP10.8□□□□□ -0.68
AL049839.2-201ENST00000553947 RAD50Q92878 1312 aa10.8□□□□□ -0.68
AL049839.2-201ENST00000553947 STRCQ7RTU9 1775 aa10.8□□□□□ -0.68
AL049839.2-201ENST00000553947 IRX5P78411 483 aaPredicted RBP10.8□□□□□ -0.68
AL049839.2-201ENST00000553947 IRX3P78415 501 aaPredicted RBP10.8□□□□□ -0.68
AL049839.2-201ENST00000553947 G3BP1Q13283 466 aaKnown RBP eCLIP10.8□□□□□ -0.68
AL049839.2-201ENST00000553947 ERC1Q8IUD2 1116 aa10.8□□□□□ -0.68
AL049839.2-201ENST00000553947 HDAC5Q9UQL6 1122 aa10.8□□□□□ -0.68
AL049839.2-201ENST00000553947 NBPF26B4DH59 902 aa10.79□□□□□ -0.68
AL049839.2-201ENST00000553947 NBPF14Q5TI25 921 aa10.79□□□□□ -0.68
AL049839.2-201ENST00000553947 NBPF10Q6P3W6 841 aaKnown RBP10.79□□□□□ -0.68
AL049839.2-201ENST00000553947 NBPF15Q8N660 670 aa10.79□□□□□ -0.68
AL049839.2-201ENST00000553947 ZCRB1Q8TBF4 217 aaKnown RBP10.79□□□□□ -0.68
AL049839.2-201ENST00000553947 SNX14Q9Y5W7 946 aa10.79□□□□□ -0.68
AL049839.2-201ENST00000553947 CUL4AQ13619 759 aa10.79□□□□□ -0.68
AL049839.2-201ENST00000553947 RBM27Q9P2N5 1060 aaKnown RBP10.79□□□□□ -0.68
AL049839.2-201ENST00000553947 COL5A2P05997 1499 aaPredicted RBP10.79□□□□□ -0.68
AL049839.2-201ENST00000553947 PTH1RQ03431 593 aa10.78□□□□□ -0.68
AL049839.2-201ENST00000553947 FOXD4L5Q5VV16 416 aaPredicted RBP10.78□□□□□ -0.68
AL049839.2-201ENST00000553947 FOXD4L4Q8WXT5 416 aaPredicted RBP10.78□□□□□ -0.68
AL049839.2-201ENST00000553947 BCL2L12Q9HB09 334 aa10.78□□□□□ -0.68
AL049839.2-201ENST00000553947 PLEKHG2Q9H7P9 1386 aa10.78□□□□□ -0.68
AL049839.2-201ENST00000553947 PRPF40AO75400 957 aaKnown RBP10.78□□□□□ -0.68
AL049839.2-201ENST00000553947 UBE3BQ7Z3V4 1068 aa10.78□□□□□ -0.68
AL049839.2-201ENST00000553947 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms