RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 TTLL6Q8N841 843 aa29.84■■■□□ 2.37
NEK9-203ENST00000553945 SRGNP10124 158 aa29.83■■■□□ 2.37
NEK9-203ENST00000553945 YY1P25490 414 aa29.83■■■□□ 2.37
NEK9-203ENST00000553945 ZNF428Q96B54 188 aa29.83■■■□□ 2.37
NEK9-203ENST00000553945 ISCA1Q9BUE6 129 aa29.83■■■□□ 2.37
NEK9-203ENST00000553945 TNRC6CQ9HCJ0 1690 aaKnown RBP29.82■■■□□ 2.36
NEK9-203ENST00000553945 STYK1Q6J9G0 422 aa29.81■■■□□ 2.36
NEK9-203ENST00000553945 ARHGAP27Q6ZUM4 889 aa29.81■■■□□ 2.36
NEK9-203ENST00000553945 MASTLQ96GX5 879 aa29.81■■■□□ 2.36
NEK9-203ENST00000553945 MYD88Q99836 296 aa29.81■■■□□ 2.36
NEK9-203ENST00000553945 TRMT112Q9UI30 125 aaKnown RBP29.81■■■□□ 2.36
NEK9-203ENST00000553945 CACNA1FO60840 1977 aa29.81■■■□□ 2.36
NEK9-203ENST00000553945 KLRG2A4D1S0 409 aaPredicted RBP29.8■■■□□ 2.36
NEK9-203ENST00000553945 HNRNPUQ00839 825 aaKnown RBP eCLIP29.8■■■□□ 2.36
NEK9-203ENST00000553945 MAP3K2Q9Y2U5 619 aa29.8■■■□□ 2.36
NEK9-203ENST00000553945 RNF123Q5XPI4 1314 aa29.79■■■□□ 2.36
NEK9-203ENST00000553945 PI4KAP2A4QPH2 592 aa29.79■■■□□ 2.36
NEK9-203ENST00000553945 KSR2Q6VAB6 950 aa29.79■■■□□ 2.36
NEK9-203ENST00000553945 PI4KAP1Q8N8J0 262 aa29.79■■■□□ 2.36
NEK9-203ENST00000553945 CACNA1SQ13698 1873 aa29.78■■■□□ 2.36
NEK9-203ENST00000553945 NPR1P16066 1061 aa29.78■■■□□ 2.36
NEK9-203ENST00000553945 FLIIQ13045 1269 aa29.78■■■□□ 2.36
NEK9-203ENST00000553945 RIC1Q4ADV7 1423 aa29.78■■■□□ 2.36
NEK9-203ENST00000553945 TRIM28Q13263 835 aaKnown RBP29.77■■■□□ 2.36
NEK9-203ENST00000553945 TRMT2AQ8IZ69 625 aaKnown RBP29.77■■■□□ 2.36
NEK9-203ENST00000553945 CNKSR1Q969H4 720 aa29.77■■■□□ 2.36
NEK9-203ENST00000553945 METTL22Q9BUU2 404 aaPredicted RBP29.77■■■□□ 2.36
NEK9-203ENST00000553945 ADCY9O60503 1353 aa29.77■■■□□ 2.36
NEK9-203ENST00000553945 SH3TC1Q8TE82 1336 aa29.76■■■□□ 2.36
NEK9-203ENST00000553945 FKBP5Q13451 457 aaPredicted RBP29.76■■■□□ 2.35
NEK9-203ENST00000553945 SYNE4Q8N205 404 aa29.76■■■□□ 2.35
NEK9-203ENST00000553945 SLC10A5Q5PT55 438 aa29.75■■■□□ 2.35
NEK9-203ENST00000553945 ZNF219Q9P2Y4 722 aaPredicted RBP29.75■■■□□ 2.35
NEK9-203ENST00000553945 HCLS1P14317 486 aaPredicted RBP29.74■■■□□ 2.35
NEK9-203ENST00000553945 PRPF40BQ6NWY9 871 aaKnown RBP29.74■■■□□ 2.35
NEK9-203ENST00000553945 NLRP3Q96P20 1036 aa29.74■■■□□ 2.35
NEK9-203ENST00000553945 CRY2Q49AN0 593 aa29.73■■■□□ 2.35
NEK9-203ENST00000553945 C3orf67Q6ZVT6 689 aa29.73■■■□□ 2.35
NEK9-203ENST00000553945 RPGRQ92834 1020 aaKnown RBP29.73■■■□□ 2.35
NEK9-203ENST00000553945 FAM89AQ96GI7 184 aa29.73■■■□□ 2.35
NEK9-203ENST00000553945 SLX4Q8IY92 1834 aa29.73■■■□□ 2.35
NEK9-203ENST00000553945 NEXNQ0ZGT2 675 aa29.72■■■□□ 2.35
NEK9-203ENST00000553945 RTL5Q5HYW3 569 aaPredicted RBP29.72■■■□□ 2.35
NEK9-203ENST00000553945 C21orf2O43822 256 aa29.71■■■□□ 2.35
NEK9-203ENST00000553945 CCDC191Q8NCU4 936 aa29.71■■■□□ 2.35
NEK9-203ENST00000553945 CWC25Q9NXE8 425 aaPredicted RBP29.71■■■□□ 2.35
NEK9-203ENST00000553945 LAMB2P55268 1798 aa29.69■■■□□ 2.34
NEK9-203ENST00000553945 ALDH1B1P30837 517 aa29.69■■■□□ 2.34
NEK9-203ENST00000553945 DDX60Q8IY21 1712 aaKnown RBP29.68■■■□□ 2.34
NEK9-203ENST00000553945 IGKV5-2P06315 115 aa29.68■■■□□ 2.34
NEK9-203ENST00000553945 ZBTB38Q8NAP3 1195 aaPredicted RBP29.68■■■□□ 2.34
NEK9-203ENST00000553945 DNAAF4Q8WXU2 420 aa29.68■■■□□ 2.34
NEK9-203ENST00000553945 RBM17Q96I25 401 aaKnown RBP29.68■■■□□ 2.34
NEK9-203ENST00000553945 HOXA10P31260 410 aaPredicted RBP29.67■■■□□ 2.34
NEK9-203ENST00000553945 CWF19L2Q2TBE0 894 aaKnown RBP29.66■■■□□ 2.34
NEK9-203ENST00000553945 MRPL50Q8N5N7 158 aaKnown RBP29.66■■■□□ 2.34
NEK9-203ENST00000553945 IRS4O14654 1257 aaPredicted RBP29.65■■■□□ 2.34
NEK9-203ENST00000553945 SSH1Q8WYL5 1049 aa29.65■■■□□ 2.34
NEK9-203ENST00000553945 JARID2Q92833 1246 aaPredicted RBP29.65■■■□□ 2.34
NEK9-203ENST00000553945 NEURL1BA8MQ27 555 aa29.64■■■□□ 2.34
NEK9-203ENST00000553945 F6X3S4 739 aa29.64■■■□□ 2.34
NEK9-203ENST00000553945 PCCAP05165 728 aaPredicted RBP29.64■■■□□ 2.34
NEK9-203ENST00000553945 RASSF7Q02833 373 aa29.64■■■□□ 2.34
NEK9-203ENST00000553945 CRAMP1Q96RY5 1269 aa29.64■■■□□ 2.34
NEK9-203ENST00000553945 SOGA3Q5TF21 947 aa29.63■■■□□ 2.33
NEK9-203ENST00000553945 BCL2L13Q9BXK5 485 aa29.63■■■□□ 2.33
NEK9-203ENST00000553945 CT47B1P0C2W7 299 aaPredicted RBP29.62■■■□□ 2.33
NEK9-203ENST00000553945 C7orf43Q8WVR3 580 aa29.62■■■□□ 2.33
NEK9-203ENST00000553945 NFKBIEO00221 500 aa29.61■■■□□ 2.33
NEK9-203ENST00000553945 HSP90B1P14625 803 aaKnown RBP29.61■■■□□ 2.33
NEK9-203ENST00000553945 ALDH1L2Q3SY69 923 aa29.61■■■□□ 2.33
NEK9-203ENST00000553945 LINS1Q8NG48 757 aa29.61■■■□□ 2.33
NEK9-203ENST00000553945 FER1L6Q2WGJ9 1857 aa29.6■■■□□ 2.33
NEK9-203ENST00000553945 CCDC93Q567U6 631 aa29.6■■■□□ 2.33
NEK9-203ENST00000553945 C9orf131Q5VYM1 1079 aa29.6■■■□□ 2.33
NEK9-203ENST00000553945 OLFM4Q6UX06 510 aa29.6■■■□□ 2.33
NEK9-203ENST00000553945 DDX46Q7L014 1031 aaKnown RBP29.6■■■□□ 2.33
NEK9-203ENST00000553945 SMC4Q9NTJ3 1288 aa29.6■■■□□ 2.33
NEK9-203ENST00000553945 SBF1O95248 1867 aa29.59■■■□□ 2.33
NEK9-203ENST00000553945 RNF181Q9P0P0 153 aa29.59■■■□□ 2.33
NEK9-203ENST00000553945 ABCC4O15439 1325 aa29.59■■■□□ 2.33
NEK9-203ENST00000553945 ZBED9Q6R2W3 1325 aa29.59■■■□□ 2.33
NEK9-203ENST00000553945 PPEF1O14829 653 aaPredicted RBP29.58■■■□□ 2.33
NEK9-203ENST00000553945 GCKRQ14397 625 aa29.58■■■□□ 2.33
NEK9-203ENST00000553945 SF3B3Q15393 1217 aaKnown RBP29.58■■■□□ 2.33
NEK9-203ENST00000553945 SLC4A10Q6U841 1118 aa29.58■■■□□ 2.33
NEK9-203ENST00000553945 ZNF784Q8NCA9 323 aaPredicted RBP29.57■■■□□ 2.32
NEK9-203ENST00000553945 PTPRCP08575 1304 aa29.56■■■□□ 2.32
NEK9-203ENST00000553945 CDHR2Q9BYE9 1310 aa29.56■■■□□ 2.32
NEK9-203ENST00000553945 PDE8AO60658 829 aa29.56■■■□□ 2.32
NEK9-203ENST00000553945 LMNB1P20700 586 aa29.56■■■□□ 2.32
NEK9-203ENST00000553945 BEND3Q5T5X7 828 aa29.56■■■□□ 2.32
NEK9-203ENST00000553945 TAOK3Q9H2K8 898 aa29.56■■■□□ 2.32
NEK9-203ENST00000553945 CCDC88AQ3V6T2 1871 aa29.55■■■□□ 2.32
NEK9-203ENST00000553945 PRELPP51888 382 aa29.55■■■□□ 2.32
NEK9-203ENST00000553945 UBE3BQ7Z3V4 1068 aa29.55■■■□□ 2.32
NEK9-203ENST00000553945 TAF1P21675 1872 aa29.55■■■□□ 2.32
NEK9-203ENST00000553945 H7C1W4 665 aa29.54■■■□□ 2.32
NEK9-203ENST00000553945 RTKN2Q8IZC4 609 aa29.54■■■□□ 2.32
NEK9-203ENST00000553945 LTBP3Q9NS15 1303 aa29.53■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms