RNA–Protein interactions for RNA: ENST00000553937.1

SDR39U1-207, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 217 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-207ENST00000553937 SMC1BQ8NDV3 1235 aa11.84□□□□□ -0.51
SDR39U1-207ENST00000553937 MRS2Q9HD23 443 aa11.84□□□□□ -0.51
SDR39U1-207ENST00000553937 POTECB2RU33 542 aa11.83□□□□□ -0.52
SDR39U1-207ENST00000553937 FKBP4Q02790 459 aaKnown RBP eCLIP11.83□□□□□ -0.52
SDR39U1-207ENST00000553937 DIEXFQ68CQ4 756 aaKnown RBP11.83□□□□□ -0.52
SDR39U1-207ENST00000553937 LRRC37AA6NMS7 1700 aa11.83□□□□□ -0.52
SDR39U1-207ENST00000553937 ADAMTSL1Q8N6G6 1762 aa11.82□□□□□ -0.52
SDR39U1-207ENST00000553937 COL4A5P29400 1685 aa11.82□□□□□ -0.52
SDR39U1-207ENST00000553937 DDNO94850 711 aaPredicted RBP11.82□□□□□ -0.52
SDR39U1-207ENST00000553937 HTRA3P83110 453 aa11.82□□□□□ -0.52
SDR39U1-207ENST00000553937 AIMP1Q12904 312 aaKnown RBP11.82□□□□□ -0.52
SDR39U1-207ENST00000553937 PARP10Q53GL7 1025 aa11.82□□□□□ -0.52
SDR39U1-207ENST00000553937 COPS6Q7L5N1 327 aa11.82□□□□□ -0.52
SDR39U1-207ENST00000553937 PPP1R42Q7Z4L9 355 aa11.82□□□□□ -0.52
SDR39U1-207ENST00000553937 XAGE3Q8WTP9 111 aa11.82□□□□□ -0.52
SDR39U1-207ENST00000553937 RPGRQ92834 1020 aaKnown RBP11.82□□□□□ -0.52
SDR39U1-207ENST00000553937 ZNF277Q9NRM2 450 aaPredicted RBP11.82□□□□□ -0.52
SDR39U1-207ENST00000553937 HOXA10P31260 410 aaPredicted RBP11.81□□□□□ -0.52
SDR39U1-207ENST00000553937 C3orf67Q6ZVT6 689 aa11.81□□□□□ -0.52
SDR39U1-207ENST00000553937 RTKN2Q8IZC4 609 aa11.81□□□□□ -0.52
SDR39U1-207ENST00000553937 DNAJC5GQ8N7S2 189 aa11.81□□□□□ -0.52
SDR39U1-207ENST00000553937 DDX21Q9NR30 783 aaKnown RBP eCLIP11.81□□□□□ -0.52
SDR39U1-207ENST00000553937 CHPF2Q9P2E5 772 aa11.81□□□□□ -0.52
SDR39U1-207ENST00000553937 APAF1O14727 1248 aa11.8□□□□□ -0.52
SDR39U1-207ENST00000553937 IARSP41252 1262 aaKnown RBP11.8□□□□□ -0.52
SDR39U1-207ENST00000553937 HDGFL1Q5TGJ6 251 aa11.8□□□□□ -0.52
SDR39U1-207ENST00000553937 SLC51AQ86UW1 340 aa11.8□□□□□ -0.52
SDR39U1-207ENST00000553937 CFAP44Q96MT7 982 aa11.8□□□□□ -0.52
SDR39U1-207ENST00000553937 UTP14AQ9BVJ6 771 aaKnown RBP11.8□□□□□ -0.52
SDR39U1-207ENST00000553937 ZNF541Q9H0D2 1346 aa11.8□□□□□ -0.52
SDR39U1-207ENST00000553937 LTBP1Q14766 1721 aa11.8□□□□□ -0.52
SDR39U1-207ENST00000553937 PPEF1O14829 653 aaPredicted RBP11.79□□□□□ -0.52
SDR39U1-207ENST00000553937 HOXB7P09629 217 aa11.79□□□□□ -0.52
SDR39U1-207ENST00000553937 HSP90AB3PQ58FF7 597 aa11.79□□□□□ -0.52
SDR39U1-207ENST00000553937 NLRP10Q86W26 655 aa11.79□□□□□ -0.52
SDR39U1-207ENST00000553937 MIER1Q8N108 512 aa11.79□□□□□ -0.52
SDR39U1-207ENST00000553937 SYNE4Q8N205 404 aa11.79□□□□□ -0.52
SDR39U1-207ENST00000553937 RBM17Q96I25 401 aaKnown RBP11.79□□□□□ -0.52
SDR39U1-207ENST00000553937 CRAMP1Q96RY5 1269 aa11.79□□□□□ -0.52
SDR39U1-207ENST00000553937 PSMD1Q99460 953 aa11.79□□□□□ -0.52
SDR39U1-207ENST00000553937 MBIPQ9NS73 344 aa11.79□□□□□ -0.52
SDR39U1-207ENST00000553937 MYH3P11055 1940 aa11.79□□□□□ -0.52
SDR39U1-207ENST00000553937 RNF123Q5XPI4 1314 aa11.79□□□□□ -0.52
SDR39U1-207ENST00000553937 TCERG1O14776 1098 aaKnown RBP11.78□□□□□ -0.52
SDR39U1-207ENST00000553937 ZNF853P0CG23 659 aa11.78□□□□□ -0.52
SDR39U1-207ENST00000553937 POTEIP0CG38 1075 aa11.78□□□□□ -0.52
SDR39U1-207ENST00000553937 POTEJP0CG39 1038 aa11.78□□□□□ -0.52
SDR39U1-207ENST00000553937 SLC10A5Q5PT55 438 aa11.78□□□□□ -0.52
SDR39U1-207ENST00000553937 DUSP27Q5VZP5 1158 aa11.78□□□□□ -0.52
SDR39U1-207ENST00000553937 CC2D2BQ6DHV5 1058 aa11.78□□□□□ -0.52
SDR39U1-207ENST00000553937 FAM9BQ8IZU0 186 aa11.78□□□□□ -0.52
SDR39U1-207ENST00000553937 NLRP3Q96P20 1036 aa11.78□□□□□ -0.52
SDR39U1-207ENST00000553937 DBF4Q9UBU7 674 aaPredicted RBP11.78□□□□□ -0.52
SDR39U1-207ENST00000553937 SPEF2Q9C093 1822 aa11.78□□□□□ -0.52
SDR39U1-207ENST00000553937 PCNTO95613 3336 aa11.78□□□□□ -0.52
SDR39U1-207ENST00000553937 COL4A1P02462 1669 aa11.78□□□□□ -0.52
SDR39U1-207ENST00000553937 CACNA1FO60840 1977 aa11.78□□□□□ -0.52
SDR39U1-207ENST00000553937 TCIRG1Q13488 830 aa11.77□□□□□ -0.53
SDR39U1-207ENST00000553937 PLBD2Q8NHP8 589 aa11.77□□□□□ -0.53
SDR39U1-207ENST00000553937 ZNF428Q96B54 188 aa11.77□□□□□ -0.53
SDR39U1-207ENST00000553937 KLRG1Q96E93 195 aa11.77□□□□□ -0.53
SDR39U1-207ENST00000553937 L3MBTL3Q96JM7 780 aaPredicted RBP11.77□□□□□ -0.53
SDR39U1-207ENST00000553937 IFT57Q9NWB7 429 aa11.77□□□□□ -0.53
SDR39U1-207ENST00000553937 ABCC4O15439 1325 aa11.77□□□□□ -0.53
SDR39U1-207ENST00000553937 DUOX1Q9NRD9 1551 aa11.76□□□□□ -0.53
SDR39U1-207ENST00000553937 IQCA1LA6NCM1 817 aa11.76□□□□□ -0.53
SDR39U1-207ENST00000553937 FZD9O00144 591 aa11.76□□□□□ -0.53
SDR39U1-207ENST00000553937 HCLS1P14317 486 aaPredicted RBP11.76□□□□□ -0.53
SDR39U1-207ENST00000553937 GNAI1P63096 354 aa11.76□□□□□ -0.53
SDR39U1-207ENST00000553937 CHADLQ6NUI6 762 aa11.76□□□□□ -0.53
SDR39U1-207ENST00000553937 TRMT112Q9UI30 125 aaKnown RBP11.76□□□□□ -0.53
SDR39U1-207ENST00000553937 SH3TC1Q8TE82 1336 aa11.76□□□□□ -0.53
SDR39U1-207ENST00000553937 TRPM7Q96QT4 1865 aa11.76□□□□□ -0.53
SDR39U1-207ENST00000553937 CALD1Q05682 793 aaKnown RBP11.75□□□□□ -0.53
SDR39U1-207ENST00000553937 GRIPAP1Q4V328 841 aa11.75□□□□□ -0.53
SDR39U1-207ENST00000553937 ANKRD13DQ6ZTN6 518 aa11.75□□□□□ -0.53
SDR39U1-207ENST00000553937 JDP2Q8WYK2 163 aa11.75□□□□□ -0.53
SDR39U1-207ENST00000553937 TAF1DQ9H5J8 278 aaPredicted RBP11.75□□□□□ -0.53
SDR39U1-207ENST00000553937 HYPKQ9NX55 129 aa11.75□□□□□ -0.53
SDR39U1-207ENST00000553937 SALL2Q9Y467 1007 aaPredicted RBP11.75□□□□□ -0.53
SDR39U1-207ENST00000553937 ATP5J2-PTCD1G3V325 749 aa11.74□□□□□ -0.53
SDR39U1-207ENST00000553937 ELL2O00472 640 aaPredicted RBP11.74□□□□□ -0.53
SDR39U1-207ENST00000553937 GPC2Q8N158 579 aa11.74□□□□□ -0.53
SDR39U1-207ENST00000553937 LARGE2Q8N3Y3 721 aa11.74□□□□□ -0.53
SDR39U1-207ENST00000553937 ISCA1Q9BUE6 129 aa11.74□□□□□ -0.53
SDR39U1-207ENST00000553937 HACL1Q9UJ83 578 aa11.74□□□□□ -0.53
SDR39U1-207ENST00000553937 ATP6V0A2Q9Y487 856 aa11.74□□□□□ -0.53
SDR39U1-207ENST00000553937 EPHX2P34913 555 aa11.73□□□□□ -0.53
SDR39U1-207ENST00000553937 EIF6P56537 245 aaKnown RBP11.73□□□□□ -0.53
SDR39U1-207ENST00000553937 EAPPQ56P03 285 aaPredicted RBP11.73□□□□□ -0.53
SDR39U1-207ENST00000553937 LDHDQ86WU2 507 aa11.73□□□□□ -0.53
SDR39U1-207ENST00000553937 JMYQ8N9B5 988 aa11.73□□□□□ -0.53
SDR39U1-207ENST00000553937 C8orf58Q8NAV2 365 aa11.73□□□□□ -0.53
SDR39U1-207ENST00000553937 FAM89AQ96GI7 184 aa11.73□□□□□ -0.53
SDR39U1-207ENST00000553937 TMX4Q9H1E5 349 aaPredicted RBP11.73□□□□□ -0.53
SDR39U1-207ENST00000553937 PHAXQ9H814 394 aaKnown RBP11.73□□□□□ -0.53
SDR39U1-207ENST00000553937 PSME4Q14997 1843 aa11.72□□□□□ -0.53
SDR39U1-207ENST00000553937 PPIP5K2O43314 1243 aa11.72□□□□□ -0.53
SDR39U1-207ENST00000553937 GOLGA2Q08379 1002 aa11.72□□□□□ -0.53
SDR39U1-207ENST00000553937 GRAPQ13588 217 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms