RNA–Protein interactions for RNA: ENST00000553871.5

EFCAB11-204, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-204ENST00000553871 SLC35F4A4IF30 521 aa6.12□□□□□ -1.43
EFCAB11-204ENST00000553871 ATXN7O15265 892 aaPredicted RBP6.12□□□□□ -1.43
EFCAB11-204ENST00000553871 SAMD5Q5TGI4 173 aa6.12□□□□□ -1.43
EFCAB11-204ENST00000553871 NPAS4Q8IUM7 802 aa6.12□□□□□ -1.43
EFCAB11-204ENST00000553871 BRD7Q9NPI1 651 aa6.12□□□□□ -1.43
EFCAB11-204ENST00000553871 DMGDHQ9UI17 866 aaKnown RBP6.12□□□□□ -1.43
EFCAB11-204ENST00000553871 RTCBQ9Y3I0 505 aaKnown RBP6.12□□□□□ -1.43
EFCAB11-204ENST00000553871 DCDC2BA2VCK2 349 aa6.11□□□□□ -1.43
EFCAB11-204ENST00000553871 UBAP1LF5GYI3 381 aa6.11□□□□□ -1.43
EFCAB11-204ENST00000553871 LCE2BO14633 110 aa6.11□□□□□ -1.43
EFCAB11-204ENST00000553871 KHNYNO15037 678 aaKnown RBP6.11□□□□□ -1.43
EFCAB11-204ENST00000553871 SNRPBP14678 240 aaKnown RBP6.11□□□□□ -1.43
EFCAB11-204ENST00000553871 INPP5BP32019 993 aa6.11□□□□□ -1.43
EFCAB11-204ENST00000553871 MAPK8P45983 427 aa6.11□□□□□ -1.43
EFCAB11-204ENST00000553871 EAPPQ56P03 285 aaPredicted RBP6.11□□□□□ -1.43
EFCAB11-204ENST00000553871 ZNF326Q5BKZ1 582 aaKnown RBP6.11□□□□□ -1.43
EFCAB11-204ENST00000553871 TRIM22Q8IYM9 498 aa6.11□□□□□ -1.43
EFCAB11-204ENST00000553871 GJD3Q8N144 294 aa6.11□□□□□ -1.43
EFCAB11-204ENST00000553871 GIPC2Q8TF65 315 aa6.11□□□□□ -1.43
EFCAB11-204ENST00000553871 ZCCHC2Q9C0B9 1178 aaKnown RBP6.11□□□□□ -1.43
EFCAB11-204ENST00000553871 USP20Q9Y2K6 914 aa6.11□□□□□ -1.43
EFCAB11-204ENST00000553871 PCDHGC4Q9Y5F7 938 aa6.11□□□□□ -1.43
EFCAB11-204ENST00000553871 CDC14CA4D256 554 aa6.1□□□□□ -1.43
EFCAB11-204ENST00000553871 OPLAHO14841 1288 aa6.1□□□□□ -1.43
EFCAB11-204ENST00000553871 TREHO43280 583 aa6.1□□□□□ -1.43
EFCAB11-204ENST00000553871 NEFLP07196 543 aa6.1□□□□□ -1.43
EFCAB11-204ENST00000553871 FAM157BP0CG42 384 aa6.1□□□□□ -1.43
EFCAB11-204ENST00000553871 ITGA6P23229 1130 aa6.1□□□□□ -1.43
EFCAB11-204ENST00000553871 ATP2B2Q01814 1243 aa6.1□□□□□ -1.43
EFCAB11-204ENST00000553871 PLCB3Q01970 1234 aa6.1□□□□□ -1.43
EFCAB11-204ENST00000553871 FOXR1Q6PIV2 292 aa6.1□□□□□ -1.43
EFCAB11-204ENST00000553871 ZNF438Q7Z4V0 828 aa6.1□□□□□ -1.43
EFCAB11-204ENST00000553871 FAM129BQ96TA1 746 aa6.1□□□□□ -1.43
EFCAB11-204ENST00000553871 KCNH4Q9UQ05 1017 aa6.1□□□□□ -1.43
EFCAB11-204ENST00000553871 GPR182O15218 404 aa6.09□□□□□ -1.43
EFCAB11-204ENST00000553871 XYLBO75191 536 aa6.09□□□□□ -1.43
EFCAB11-204ENST00000553871 COL19A1Q14993 1142 aa6.09□□□□□ -1.43
EFCAB11-204ENST00000553871 GMCL1Q96IK5 515 aa6.09□□□□□ -1.43
EFCAB11-204ENST00000553871 TRERF1Q96PN7 1200 aa6.09□□□□□ -1.43
EFCAB11-204ENST00000553871 NIF3L1Q9GZT8 377 aa6.09□□□□□ -1.43
EFCAB11-204ENST00000553871 PHF24Q9UPV7 400 aa6.09□□□□□ -1.43
EFCAB11-204ENST00000553871 A6NHS1 94 aa6.08□□□□□ -1.44
EFCAB11-204ENST00000553871 P4HBP07237 508 aaKnown RBP6.08□□□□□ -1.44
EFCAB11-204ENST00000553871 FGD1P98174 961 aa6.08□□□□□ -1.44
EFCAB11-204ENST00000553871 DBN1Q16643 649 aa6.08□□□□□ -1.44
EFCAB11-204ENST00000553871 GTPBP3Q969Y2 492 aaKnown RBP6.08□□□□□ -1.44
EFCAB11-204ENST00000553871 ZNF837Q96EG3 531 aaPredicted RBP6.08□□□□□ -1.44
EFCAB11-204ENST00000553871 PNMA5Q96PV4 448 aa6.08□□□□□ -1.44
EFCAB11-204ENST00000553871 GGNBP2Q9H3C7 697 aa6.08□□□□□ -1.44
EFCAB11-204ENST00000553871 CUEDC1Q9NWM3 386 aaPredicted RBP6.08□□□□□ -1.44
EFCAB11-204ENST00000553871 RBM47A0AV96 593 aaKnown RBP6.07□□□□□ -1.44
EFCAB11-204ENST00000553871 MAPTP10636 758 aaKnown RBP6.07□□□□□ -1.44
EFCAB11-204ENST00000553871 FMR1Q06787 632 aaKnown RBP eCLIP6.07□□□□□ -1.44
EFCAB11-204ENST00000553871 LAMC2Q13753 1193 aa6.07□□□□□ -1.44
EFCAB11-204ENST00000553871 TRIP4Q15650 581 aaPredicted RBP6.07□□□□□ -1.44
EFCAB11-204ENST00000553871 PDE12Q6L8Q7 609 aaKnown RBP6.07□□□□□ -1.44
EFCAB11-204ENST00000553871 SNX29Q8TEQ0 813 aa6.07□□□□□ -1.44
EFCAB11-204ENST00000553871 ZNF428Q96B54 188 aa6.07□□□□□ -1.44
EFCAB11-204ENST00000553871 ALKBH8Q96BT7 664 aaKnown RBP6.07□□□□□ -1.44
EFCAB11-204ENST00000553871 ABHD17AQ96GS6 310 aa6.07□□□□□ -1.44
EFCAB11-204ENST00000553871 MARK1Q9P0L2 795 aa6.07□□□□□ -1.44
EFCAB11-204ENST00000553871 ATXN7L1Q9ULK2 861 aaPredicted RBP6.07□□□□□ -1.44
EFCAB11-204ENST00000553871 PNMA6FA0A0J9YX94 578 aa6.06□□□□□ -1.44
EFCAB11-204ENST00000553871 PPFIA3O75145 1194 aa6.06□□□□□ -1.44
EFCAB11-204ENST00000553871 PHACTR2O75167 634 aa6.06□□□□□ -1.44
EFCAB11-204ENST00000553871 LDHBP07195 334 aaKnown RBP6.06□□□□□ -1.44
EFCAB11-204ENST00000553871 ZNF16P17020 682 aaPredicted RBP6.06□□□□□ -1.44
EFCAB11-204ENST00000553871 TNP2Q05952 138 aa6.06□□□□□ -1.44
EFCAB11-204ENST00000553871 SFSWAPQ12872 951 aaKnown RBP6.06□□□□□ -1.44
EFCAB11-204ENST00000553871 NEUROD1Q13562 356 aa6.06□□□□□ -1.44
EFCAB11-204ENST00000553871 CCINQ13939 588 aa6.06□□□□□ -1.44
EFCAB11-204ENST00000553871 TTC39BQ5VTQ0 682 aaPredicted RBP6.06□□□□□ -1.44
EFCAB11-204ENST00000553871 KRT25Q7Z3Z0 450 aa6.06□□□□□ -1.44
EFCAB11-204ENST00000553871 ELP3Q9H9T3 547 aa6.06□□□□□ -1.44
EFCAB11-204ENST00000553871 KCNMB2Q9Y691 235 aa6.06□□□□□ -1.44
EFCAB11-204ENST00000553871 E9PSI1 815 aa6.05□□□□□ -1.44
EFCAB11-204ENST00000553871 EFSO43281 561 aa6.05□□□□□ -1.44
EFCAB11-204ENST00000553871 BNIP3LO60238 219 aa6.05□□□□□ -1.44
EFCAB11-204ENST00000553871 THBS1P07996 1170 aa6.05□□□□□ -1.44
EFCAB11-204ENST00000553871 CD33P20138 364 aa6.05□□□□□ -1.44
EFCAB11-204ENST00000553871 KCNQ4P56696 695 aa6.05□□□□□ -1.44
EFCAB11-204ENST00000553871 SPEM2Q0P670 501 aa6.05□□□□□ -1.44
EFCAB11-204ENST00000553871 ORC1Q13415 861 aa6.05□□□□□ -1.44
EFCAB11-204ENST00000553871 DSC3Q14574 896 aa6.05□□□□□ -1.44
EFCAB11-204ENST00000553871 SV2AQ7L0J3 742 aa6.05□□□□□ -1.44
EFCAB11-204ENST00000553871 FBXO33Q7Z6M2 555 aa6.05□□□□□ -1.44
EFCAB11-204ENST00000553871 NLRP13Q86W25 1043 aa6.05□□□□□ -1.44
EFCAB11-204ENST00000553871 CSRNP1Q96S65 589 aa6.05□□□□□ -1.44
EFCAB11-204ENST00000553871 C11orf16Q9NQ32 467 aa6.05□□□□□ -1.44
EFCAB11-204ENST00000553871 ABI2Q9NYB9 513 aaPredicted RBP6.05□□□□□ -1.44
EFCAB11-204ENST00000553871 GPR25O00155 361 aa6.04□□□□□ -1.44
EFCAB11-204ENST00000553871 EIF1AYO14602 144 aaKnown RBP6.04□□□□□ -1.44
EFCAB11-204ENST00000553871 CPNE3O75131 537 aaKnown RBP6.04□□□□□ -1.44
EFCAB11-204ENST00000553871 PRPF40AO75400 957 aaKnown RBP6.04□□□□□ -1.44
EFCAB11-204ENST00000553871 TNFRSF21O75509 655 aa6.04□□□□□ -1.44
EFCAB11-204ENST00000553871 SASH3O75995 380 aa6.04□□□□□ -1.44
EFCAB11-204ENST00000553871 IGHA2P01877 340 aa6.04□□□□□ -1.44
EFCAB11-204ENST00000553871 RARAP10276 462 aa6.04□□□□□ -1.44
EFCAB11-204ENST00000553871 FGFR3P22607 806 aa6.04□□□□□ -1.44
EFCAB11-204ENST00000553871 ITGAEP38570 1179 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms